BLASTX nr result

ID: Papaver22_contig00005865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005865
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264772.1| PREDICTED: ATPase family AAA domain-containi...    71   5e-16
emb|CBI36654.3| unnamed protein product [Vitis vinifera]               71   5e-16
ref|XP_002309811.1| bromodomain protein [Populus trichocarpa] gi...    62   3e-12
ref|XP_002327967.1| bromodomain protein [Populus trichocarpa] gi...    62   1e-11
ref|XP_002889576.1| hypothetical protein ARALYDRAFT_470606 [Arab...    54   2e-11

>ref|XP_002264772.1| PREDICTED: ATPase family AAA domain-containing protein 2B-like
           [Vitis vinifera]
          Length = 1218

 Score = 70.9 bits (172), Expect(2) = 5e-16
 Identities = 44/61 (72%), Positives = 46/61 (75%), Gaps = 4/61 (6%)
 Frame = -3

Query: 173 TAASQIAKMLRPGAE--RNRLTNSVGTNLRRSTRKRKRSGQLRGYQTDSSAS--DDDLMR 6
           TAASQIAKMLRPG    RN  +NSV TNLRRSTRKR+ S  L GY TDSS S  DDDLMR
Sbjct: 53  TAASQIAKMLRPGNRPMRNSNSNSVATNLRRSTRKRRISVNLEGY-TDSSGSEEDDDLMR 111

Query: 5   P 3
           P
Sbjct: 112 P 112



 Score = 38.1 bits (87), Expect(2) = 5e-16
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 364 SAPAPVRVSDRIRKAPKAYVNRSLIYYSP 278
           SA  PVR SDR+R+ PK Y  RS +YYSP
Sbjct: 12  SASGPVRTSDRLRRRPKMY-GRSYLYYSP 39


>emb|CBI36654.3| unnamed protein product [Vitis vinifera]
          Length = 1105

 Score = 70.9 bits (172), Expect(2) = 5e-16
 Identities = 44/61 (72%), Positives = 46/61 (75%), Gaps = 4/61 (6%)
 Frame = -3

Query: 173 TAASQIAKMLRPGAE--RNRLTNSVGTNLRRSTRKRKRSGQLRGYQTDSSAS--DDDLMR 6
           TAASQIAKMLRPG    RN  +NSV TNLRRSTRKR+ S  L GY TDSS S  DDDLMR
Sbjct: 53  TAASQIAKMLRPGNRPMRNSNSNSVATNLRRSTRKRRISVNLEGY-TDSSGSEEDDDLMR 111

Query: 5   P 3
           P
Sbjct: 112 P 112



 Score = 38.1 bits (87), Expect(2) = 5e-16
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 364 SAPAPVRVSDRIRKAPKAYVNRSLIYYSP 278
           SA  PVR SDR+R+ PK Y  RS +YYSP
Sbjct: 12  SASGPVRTSDRLRRRPKMY-GRSYLYYSP 39


>ref|XP_002309811.1| bromodomain protein [Populus trichocarpa]
           gi|222852714|gb|EEE90261.1| bromodomain protein [Populus
           trichocarpa]
          Length = 1219

 Score = 61.6 bits (148), Expect(2) = 3e-12
 Identities = 34/57 (59%), Positives = 38/57 (66%)
 Frame = -3

Query: 173 TAASQIAKMLRPGAERNRLTNSVGTNLRRSTRKRKRSGQLRGYQTDSSASDDDLMRP 3
           TAAS+IAKML   A R    NSV TNLRRSTRKR+ S  L  Y   S + D+DLMRP
Sbjct: 53  TAASRIAKMLGNRAVRAANANSVPTNLRRSTRKRRLSAHLEDYTDSSGSEDEDLMRP 109



 Score = 34.7 bits (78), Expect(2) = 3e-12
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = -1

Query: 358 PAPVRVSDRIRKAPKAYVNRSLIYYSP 278
           P PVR SDR+R+ PK + +R+ +YY+P
Sbjct: 14  PRPVRTSDRLRRRPKVF-SRTYLYYTP 39


>ref|XP_002327967.1| bromodomain protein [Populus trichocarpa]
           gi|222837376|gb|EEE75755.1| bromodomain protein [Populus
           trichocarpa]
          Length = 1157

 Score = 61.6 bits (148), Expect(2) = 1e-11
 Identities = 34/57 (59%), Positives = 38/57 (66%)
 Frame = -3

Query: 173 TAASQIAKMLRPGAERNRLTNSVGTNLRRSTRKRKRSGQLRGYQTDSSASDDDLMRP 3
           TAAS+IAKML   A R    NSV TNLRRSTRKR+ S  L  Y   S + D+DLMRP
Sbjct: 53  TAASRIAKMLGNRAVRAANANSVPTNLRRSTRKRRLSAHLEDYTDSSGSEDEDLMRP 109



 Score = 32.3 bits (72), Expect(2) = 1e-11
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -1

Query: 352 PVRVSDRIRKAPKAYVNRSLIYYSP 278
           PVR SDR+R+ PK + +R+ +YY+P
Sbjct: 16  PVRTSDRLRRRPKVF-SRTYLYYTP 39


>ref|XP_002889576.1| hypothetical protein ARALYDRAFT_470606 [Arabidopsis lyrata subsp.
           lyrata] gi|297335418|gb|EFH65835.1| hypothetical protein
           ARALYDRAFT_470606 [Arabidopsis lyrata subsp. lyrata]
          Length = 1208

 Score = 53.9 bits (128), Expect(2) = 2e-11
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = -3

Query: 173 TAASQIAKMLRPGAERNRLTNS--VGTNLRRSTRKRKRSGQLRGYQTDSSASDDDLMRP 3
           TAASQIAKML  G    R +N+  + ++LRRSTRKR+ S  L  Y   S A D+D+M P
Sbjct: 53  TAASQIAKMLHKGNRPARASNAAPIASDLRRSTRKRRISVNLEDYTDSSGAEDEDMMSP 111



 Score = 39.7 bits (91), Expect(2) = 2e-11
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = -1

Query: 364 SAPAPVRVSDRIRKAPKAYVNRSLIYYSPHTL 269
           S   PVR SDR+R+ PK Y NRS +YYSP+ L
Sbjct: 12  SVTKPVRSSDRLRRRPKLY-NRSYVYYSPNIL 42


Top