BLASTX nr result

ID: Papaver22_contig00005748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005748
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39650.3| unnamed protein product [Vitis vinifera]               78   4e-12
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...    77   8e-12
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...    75   3e-11
emb|CBI39651.3| unnamed protein product [Vitis vinifera]               74   4e-11
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...    72   2e-10

>emb|CBI39650.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
 Frame = -1

Query: 454 GETIVGALEVHANGFYYATASPYFCFSFLYTDLQKVFFRVGDEKMSPLLHFHYHDCITVG 275
           G  + G+LE H NGF Y+T+ P      +Y +++  FF+  +++M  LLHFH H+ I VG
Sbjct: 408 GRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVG 467

Query: 274 TETRQNIQFRLVQTPVRQKRSYNDLYKINEDLKNFVHNVQEKWRGVPVVHYSPFVDAEVR 95
            +  +++QF  V+   R +++     KIN D +NFV+ V + W G P       +D E  
Sbjct: 468 NKKTKDVQF-FVEVMDRDRKN-----KINMDFQNFVNRVNDLW-GQP---QFKGLDLEFD 517

Query: 94  KADEFQGNH--PSKAPTFFGLTLFSLVGLVDEP 2
           +     G H  P KA  F   T   LV L++ P
Sbjct: 518 QPLRELGFHGVPHKASAFIVPTSSCLVELIETP 550


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
 Frame = -1

Query: 454  GETIVGALEVHANGFYYATASPYFCFSFLYTDLQKVFFRVGDEKMSPLLHFHYHDCITVG 275
            G  + G+LE H NG  Y+T+ P      +Y++++  FF+  D++M  LLHFH H+ I VG
Sbjct: 691  GRKLTGSLEAHVNGLRYSTSRPDERIDVMYSNIKHAFFQPADKEMITLLHFHLHNHIMVG 750

Query: 274  TETRQNIQF-----RLVQTPVRQKRSYND-------------LYKINEDLKNFVHNVQEK 149
             +  +++QF      +VQT    KRS  D               KIN D +NFV+ V + 
Sbjct: 751  NKKTKDVQFFIEVMDIVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDV 810

Query: 148  WRGVPVVHYSPFVDAEVRKADEFQGNH--PSKAPTFFGLTLFSLVGLVDEP 2
            W G P       +D E  +     G H  P KA  F   T   LV L++ P
Sbjct: 811  W-GQPQFR---GLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETP 857


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
 Frame = -1

Query: 454  GETIVGALEVHANGFYYATASPYFCFSFLYTDLQKVFFRVGDEKMSPLLHFHYHDCITVG 275
            G  + G+LE H NGF Y+T+ P      +Y +++  FF+  +++M  LLHFH H+ I VG
Sbjct: 694  GRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVG 753

Query: 274  TETRQNIQF-----RLVQTPVRQKRSYND-------------LYKINEDLKNFVHNVQEK 149
             +  +++QF      +VQT    KRS  D               KIN D +NFV+ V + 
Sbjct: 754  NKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDL 813

Query: 148  WRGVPVVHYSPFVDAEVRKADEFQGNH--PSKAPTFFGLTLFSLVGLVDEP 2
            W G P       +D E  +     G H  P KA  F   T   LV L++ P
Sbjct: 814  W-GQP---QFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETP 860


>emb|CBI39651.3| unnamed protein product [Vitis vinifera]
          Length = 977

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
 Frame = -1

Query: 502  ITLAGLKIFSKVGEQVGETIVGALEVHANGFYYATASPYFCFSFLYTDLQKVFFRVGDEK 323
            I L GL I    G + G  + G LE H NGF Y+T+ P      +Y +++  FF+  + +
Sbjct: 561  IKLFGLWIRPPFGGR-GRKLSGTLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENE 619

Query: 322  MSPLLHFHYHDCITVGTETRQNIQFRLVQTPVRQKRSYNDLYKINEDLKNFVHNVQEKWR 143
            M  L+HFH H+ I VGT+  +++QF  V+   R +++     K+N D ++FV+ V + W 
Sbjct: 620  MITLIHFHLHNHIMVGTKKTKDVQF-YVEVMDRDRKN-----KVNMDFQSFVNRVNDLW- 672

Query: 142  GVPVVHYSPFVDAEVRKADEFQGNH--PSKAPTFFGLTLFSLVGLVDEP 2
            G P   +S  +D E  +     G H  P K+  F   T   LV L++ P
Sbjct: 673  GQP--QFSG-LDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLVELIETP 718


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
 Frame = -1

Query: 502  ITLAGLKIFSKVGEQVGETIVGALEVHANGFYYATASPYFCFSFLYTDLQKVFFRVGDEK 323
            I L GL I    G + G  + G LE H NGF Y+T+ P      +Y +++  FF+  + +
Sbjct: 674  IKLFGLWIRPPFGGR-GRKLSGTLEAHVNGFRYSTSRPDERVDIMYGNIKHAFFQPVENE 732

Query: 322  MSPLLHFHYHDCITVGTETRQNIQF-----RLVQTPVRQKRSYND-------------LY 197
            M  L+HFH H+ I VGT+  +++QF      +VQT    KRS  D               
Sbjct: 733  MITLIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRKN 792

Query: 196  KINEDLKNFVHNVQEKWRGVPVVHYSPFVDAEVRKADEFQGNH--PSKAPTFFGLTLFSL 23
            K+N D ++FV+ V + W G P   +S  +D E  +     G H  P K+  F   T   L
Sbjct: 793  KVNMDFQSFVNRVNDLW-GQP--QFSG-LDLEFDQPLRELGFHGVPYKSSAFIVPTSSCL 848

Query: 22   VGLVDEP 2
            V L++ P
Sbjct: 849  VELIETP 855


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