BLASTX nr result
ID: Papaver22_contig00005747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00005747
(946 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu... 42 3e-08
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [... 45 4e-08
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] 45 4e-08
ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays] gi|752... 42 2e-07
ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S... 42 2e-07
>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
putative [Ricinus communis]
Length = 1098
Score = 42.4 bits (98), Expect(2) = 3e-08
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Frame = -3
Query: 944 EKRRDIQF-----RLVQTPVGQKRSY-------------DDSYKINEDLKNFVHNVEEKW 819
+K +D+QF +VQT G KRS D KIN D +NFV+ V + W
Sbjct: 752 KKTKDVQFFIEVMDIVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDVW 811
Query: 818 RGIPVLDCFPFVDAEVRKACEFQGSCPSKAPTIFGLTPFVLVGLVDEPFIVVDLHEIRGV 639
G P + + F G P KA T LV L++ P +V+ L EI V
Sbjct: 812 -GQPQFRGLDLEFDQPLRELGFHG-VPHKASAFIVPTSSCLVELIETPVVVITLSEIEIV 869
Query: 638 HL 633
+L
Sbjct: 870 NL 871
Score = 42.4 bits (98), Expect(2) = 3e-08
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = -1
Query: 598 DMTIVFEDFKSDPVEINSIPIKKLNLIKNSFNLAGVRYCEN--DIDW 464
DMTIVF+DFK D + I+SIP L+ IK N ++Y E+ +++W
Sbjct: 882 DMTIVFKDFKRDVLRIDSIPSTSLDSIKEWLNTTDLKYYESRLNLNW 928
>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
Length = 1071
Score = 44.7 bits (104), Expect(2) = 4e-08
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Frame = -3
Query: 944 EKRRDIQF-----RLVQTPVGQKRSY-------------DDSYKINEDLKNFVHNVEEKW 819
+K +D+QF +VQT G KRS D KIN D +NFV+ V + W
Sbjct: 755 KKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLW 814
Query: 818 RGIPVLDCFPFVDAEVRKACEFQGSCPSKAPTIFGLTPFVLVGLVDEPFIVVDLHEIRGV 639
G P + + F G P KA T LV L++ PF+V+ L EI V
Sbjct: 815 -GQPQFKGLDLEFDQPLRELGFHG-VPHKASAFIVPTSSCLVELIETPFLVITLSEIEIV 872
Query: 638 HL 633
+L
Sbjct: 873 NL 874
Score = 39.7 bits (91), Expect(2) = 4e-08
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = -1
Query: 598 DMTIVFEDFKSDPVEINSIPIKKLNLIKNSFNLAGVRYCEN--DIDW 464
DMTIVF+DFK D + I+SIP L+ IK + ++Y E+ +++W
Sbjct: 885 DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNW 931
>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
Length = 1019
Score = 44.7 bits (104), Expect(2) = 4e-08
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Frame = -3
Query: 944 EKRRDIQF-----RLVQTPVGQKRSY-------------DDSYKINEDLKNFVHNVEEKW 819
+K +D+QF +VQT G KRS D KIN D +NFV+ V + W
Sbjct: 703 KKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLW 762
Query: 818 RGIPVLDCFPFVDAEVRKACEFQGSCPSKAPTIFGLTPFVLVGLVDEPFIVVDLHEIRGV 639
G P + + F G P KA T LV L++ PF+V+ L EI V
Sbjct: 763 -GQPQFKGLDLEFDQPLRELGFHG-VPHKASAFIVPTSSCLVELIETPFLVITLSEIEIV 820
Query: 638 HL 633
+L
Sbjct: 821 NL 822
Score = 39.7 bits (91), Expect(2) = 4e-08
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = -1
Query: 598 DMTIVFEDFKSDPVEINSIPIKKLNLIKNSFNLAGVRYCEN--DIDW 464
DMTIVF+DFK D + I+SIP L+ IK + ++Y E+ +++W
Sbjct: 833 DMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNW 879
>ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays]
gi|75299841|sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT
complex subunit SPT16; AltName: Full=Facilitates
chromatin transcription complex subunit SPT16; AltName:
Full=Global transcription factor group C protein 102
gi|24021798|gb|AAN41252.1| global transcription factor
group C 102 [Zea mays] gi|413935251|gb|AFW69802.1| FACT
complex subunit SPT16 isoform 1 [Zea mays]
gi|413935252|gb|AFW69803.1| FACT complex subunit SPT16
isoform 2 [Zea mays]
Length = 1055
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Frame = -3
Query: 944 EKRRDIQFRL-----VQTPVGQKRSY-------------DDSYKINEDLKNFVHNVEEKW 819
+K +D+QF + VQT G +RS D +IN D +NFV+ V + W
Sbjct: 739 KKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKNRINMDFQNFVNKVNDHW 798
Query: 818 RGIPVLDCFPFVDAEVRKACEFQGSCPSKAPTIFGLTPFVLVGLVDEPFIVVDLHEIRGV 639
D +R+ F G P KA T LV L++ PF+VV L EI V
Sbjct: 799 SQPQFKGLDLEFDVPLRE-LGFHG-VPYKASAFIIPTSTCLVELIETPFLVVSLSEIEIV 856
Query: 638 HL 633
+L
Sbjct: 857 NL 858
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = -1
Query: 598 DMTIVFEDFKSDPVEINSIPIKKLNLIKNSFNLAGVRYCEN--DIDWCSMANSLV 440
DM IVF+DFK D + I+SIP L+ IK + ++Y E+ +++W + +++
Sbjct: 869 DMAIVFKDFKKDVLRIDSIPSASLDAIKEWLDTTDLKYYESRLNLNWRPILKTII 923
>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
gi|241920009|gb|EER93153.1| hypothetical protein
SORBIDRAFT_01g002390 [Sorghum bicolor]
Length = 1054
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Frame = -3
Query: 944 EKRRDIQFRL-----VQTPVGQKRSY-------------DDSYKINEDLKNFVHNVEEKW 819
+K +D+QF + VQT G +RS D +IN D +NFV+ V + W
Sbjct: 738 KKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKNRINMDFQNFVNKVNDHW 797
Query: 818 RGIPVLDCFPFVDAEVRKACEFQGSCPSKAPTIFGLTPFVLVGLVDEPFIVVDLHEIRGV 639
D +R+ F G P KA T LV L++ PF+VV L EI V
Sbjct: 798 SQPQFKGLDLEFDVPLRE-LGFYG-VPYKASAFIIPTSTCLVELIENPFLVVSLSEIEIV 855
Query: 638 HL 633
+L
Sbjct: 856 NL 857
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = -1
Query: 598 DMTIVFEDFKSDPVEINSIPIKKLNLIKNSFNLAGVRYCEN--DIDWCSMANSLV 440
DM IVF+DFK D + I+SIP L+ IK + ++Y E+ +++W + +++
Sbjct: 868 DMAIVFKDFKKDVLRIDSIPSASLDAIKEWLDTTDLKYYESRLNLNWRPILKTII 922