BLASTX nr result

ID: Papaver22_contig00005487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005487
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...   104   7e-20
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   103   9e-20
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   103   1e-19
ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...   103   1e-19
ref|XP_002445810.1| hypothetical protein SORBIDRAFT_07g026150 [S...   103   1e-19

>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  104 bits (259), Expect = 7e-20
 Identities = 100/300 (33%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
 Frame = -2

Query: 958  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDKELKI 779
            G KI GTLEA   +GF ++++      +D  V + F         F  P+ ++      I
Sbjct: 693  GRKIPGTLEAHV-NGFRYSTTR-----QDERVDIMF---GNIKHAFFQPAENE-----MI 738

Query: 778  PSLQFHLRDPVMVGSVETKDIMFALVCF-------------YDDPV------------KV 674
              L FHL + +MVG+ +TKD+ F +                YD               K+
Sbjct: 739  TLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELEEEQRERQRKNKI 798

Query: 673  LDNFVKIVDRAQ--WDSHRM----LPEFQVLSNCTFKGVLSGSLEGFALTYCALVMFTQL 512
               F   V+R    W   +     L   Q L    F GV   S      T   LV   + 
Sbjct: 799  NVEFQTFVNRVNDLWGQPQFNGFDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIET 858

Query: 511  PVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGN 344
            P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  +
Sbjct: 859  PFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTD 918

Query: 343  VKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWESLNLEDPKTLSYYNIEEDEEDEP 164
            +KYY    LN   ++W   LK I  DP+ F+E GGWE LNLE   + S  + E D+  EP
Sbjct: 919  IKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEP 974


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  103 bits (258), Expect = 9e-20
 Identities = 101/300 (33%), Positives = 140/300 (46%), Gaps = 35/300 (11%)
 Frame = -2

Query: 958  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDKELKI 779
            G KI GTLEA   +GF ++++      +D  V + F         F  P+ ++      I
Sbjct: 690  GRKIPGTLEAHV-NGFRYSTTR-----QDERVDIMF---GNIKHSFFQPAENE-----MI 735

Query: 778  PSLQFHLRDPVMVGSVETKDIMFALVCF-------------YD-----DPVKVLDNFVKI 653
              L FHL + +MVG+ +TKD+ F +                YD     +  +  D   KI
Sbjct: 736  TLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELEEEQRERDRKNKI 795

Query: 652  VDRAQWDSHRM-----LPEF--------QVLSNCTFKGVLSGSLEGFALTYCALVMFTQL 512
                Q   +R+      P+F        Q L    F GV   S      T   LV   + 
Sbjct: 796  NVEFQTFVNRLNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIET 855

Query: 511  PVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGN 344
            P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  +
Sbjct: 856  PFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTD 915

Query: 343  VKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWESLNLEDPKTLSYYNIEEDEEDEP 164
            +KYY    LN   ++W   LK I  DP+ F+E GGWE LNLE   + S  + E D+  EP
Sbjct: 916  IKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEP 971


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  103 bits (257), Expect = 1e-19
 Identities = 100/300 (33%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
 Frame = -2

Query: 958  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDKELKI 779
            G KI GTLEA   +GF ++++      +D  V + F         F  P+ ++      I
Sbjct: 693  GRKIPGTLEAHV-NGFRYSTTR-----QDERVDIMF---PNIKHAFFQPAENE-----MI 738

Query: 778  PSLQFHLRDPVMVGSVETKDIMFALVCF-------------YDDPV------------KV 674
              L FHL + +MVG+ +TKD+ F +                YD               K+
Sbjct: 739  TLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGSGKRSAYDPDELEEEQRERQRKNKI 798

Query: 673  LDNFVKIVDRAQ--WDSHRM----LPEFQVLSNCTFKGVLSGSLEGFALTYCALVMFTQL 512
               F   V+R    W   +     L   Q L    F GV   S      T   LV   + 
Sbjct: 799  NVEFQTFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIET 858

Query: 511  PVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGN 344
            P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  +
Sbjct: 859  PFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTD 918

Query: 343  VKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWESLNLEDPKTLSYYNIEEDEEDEP 164
            +KYY    LN   ++W   LK I  DP+ F+E GGWE LNLE   + S  + E D+  EP
Sbjct: 919  IKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEP 974


>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  103 bits (257), Expect = 1e-19
 Identities = 100/300 (33%), Positives = 137/300 (45%), Gaps = 35/300 (11%)
 Frame = -2

Query: 958  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDKELKI 779
            G KI GTLEA   +GF ++++      +D  V + F         F  P+ ++      I
Sbjct: 693  GRKIPGTLEAHV-NGFRYSTTR-----QDERVDIMF---PNIKHAFFQPAENE-----MI 738

Query: 778  PSLQFHLRDPVMVGSVETKDIMFALVCF-------------YDDPV------------KV 674
              L FHL + +MVG+ +TKD+ F +                YD               K+
Sbjct: 739  TLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSTYDPDELEEEQRERQRKNKI 798

Query: 673  LDNFVKIVDRAQ--WDSHRM----LPEFQVLSNCTFKGVLSGSLEGFALTYCALVMFTQL 512
               F   V+R    W   +     L   Q L    F GV   S      T   LV   + 
Sbjct: 799  NVEFQTFVNRVNDLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLVELIET 858

Query: 511  PVTVVPLTDIEIVDLS-VNVG---VDMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGN 344
            P  VV L++IEIV+L  V +G    DM VVFKDF+R VL+I+SI    L+ IK  LD  +
Sbjct: 859  PFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTD 918

Query: 343  VKYYCRDYLNGPKVDWNSKLKEILKDPKKFVESGGWESLNLEDPKTLSYYNIEEDEEDEP 164
            +KYY    LN   ++W   LK I  DP+ F+E GGWE LNLE   + S  + E D+  EP
Sbjct: 919  IKYY-ESRLN---LNWRQILKTITDDPQSFIEGGGWEFLNLEATDSESENSEESDKGYEP 974


>ref|XP_002445810.1| hypothetical protein SORBIDRAFT_07g026150 [Sorghum bicolor]
            gi|241942160|gb|EES15305.1| hypothetical protein
            SORBIDRAFT_07g026150 [Sorghum bicolor]
          Length = 1028

 Score =  103 bits (257), Expect = 1e-19
 Identities = 87/259 (33%), Positives = 130/259 (50%), Gaps = 12/259 (4%)
 Frame = -2

Query: 958  GVKIMGTLEAACGSGFTFTSSDIHVHFKDTSVALCFYLKNETAFCFLDPSTDDPDKELKI 779
            G K+ G LEA   +GF +++S       D  V + +         F  P+    +KE+ I
Sbjct: 676  GRKLTGNLEAHF-NGFRYSTSR-----SDERVDIMY---GNIKHAFFQPA----EKEM-I 721

Query: 778  PSLQFHLRDPVMVGSVETKDIMFALVCFYDDPVKVLDNFVKIVDRAQWDSHRMLPEFQVL 599
              L FHL + +MVG+ +TKD+ F +       V   D  +  + ++  + H   P+F+ L
Sbjct: 722  TLLHFHLHNHIMVGNKKTKDVQFYVEVM---DVVQTDLILMRLKKSSVNDHWSQPQFKGL 778

Query: 598  S--------NCTFKGVLSGSLEGFALTYCALVMFTQLPVTVVPLTDIEIVDLS-VNVGV- 449
                        F GV   +      T   LV   + P  VV L++IEIV+L  V  G  
Sbjct: 779  DLEFDVPLRELGFHGVPYKASAFIIPTSTCLVELIETPFLVVSLSEIEIVNLERVGFGTK 838

Query: 448  --DMIVVFKDFERKVLQINSIDMRKLNFIKGCLDMGNVKYYCRDYLNGPKVDWNSKLKEI 275
              DM +VFKDF++ VL+I+SI    L+ IK  LD  ++KYY    LN   ++W   LK I
Sbjct: 839  NFDMAIVFKDFKKDVLRIDSIPSASLDAIKEWLDTTDLKYY-ESRLN---LNWRPILKTI 894

Query: 274  LKDPKKFVESGGWESLNLE 218
            + DP+KF++ GGWE LN+E
Sbjct: 895  IDDPQKFIDDGGWEFLNME 913


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