BLASTX nr result

ID: Papaver22_contig00005462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005462
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              359   2e-97
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   359   2e-97
ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co...   353   1e-95
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   340   1e-91
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   339   2e-91

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  359 bits (922), Expect = 2e-97
 Identities = 173/209 (82%), Positives = 194/209 (92%)
 Frame = -1

Query: 628 VINKVDRLITELKLPPNDAYHKLRNILEVVNNHITAVSSTAGAVQIIDPSAGNVCFASAS 449
           VINKVDRLITELKLPP DAYHKLR+ LE++NNHI+A SSTAG VQIIDP+AGNVCFASAS
Sbjct: 211 VINKVDRLITELKLPPKDAYHKLRHTLELINNHISAASSTAGNVQIIDPAAGNVCFASAS 270

Query: 448 DGWSFTLQSFAKLYVKLHDVPFDASKFASRLWGDRYYHPNTKVFERKPPVNGGDRSFVQF 269
            GWSFTLQSFAKLYVKLH VPFDA+KFASRLWGD YYHP+ +VF +KPP +GG+RSFVQF
Sbjct: 271 AGWSFTLQSFAKLYVKLHGVPFDANKFASRLWGDMYYHPDARVFRKKPPASGGERSFVQF 330

Query: 268 ILEPLYKIYSQVIGENKRSVEATLEELGVKLPNAAYGLNVRPLLRLACSSVFGSATGFTD 89
           +LEPLYKIYSQVIGE+K+SVE+TL ELGV L NAAY LNVRPLLRLACSSVFGSATGFTD
Sbjct: 331 VLEPLYKIYSQVIGEHKKSVESTLAELGVTLSNAAYKLNVRPLLRLACSSVFGSATGFTD 390

Query: 88  MLVQHIPSAKEAAASKVEHIYSGPRDSSV 2
           MLVQHIPSAK+AAA KV+HIY+GP+DS++
Sbjct: 391 MLVQHIPSAKDAAAKKVDHIYTGPKDSAI 419


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  359 bits (922), Expect = 2e-97
 Identities = 173/209 (82%), Positives = 194/209 (92%)
 Frame = -1

Query: 628 VINKVDRLITELKLPPNDAYHKLRNILEVVNNHITAVSSTAGAVQIIDPSAGNVCFASAS 449
           VINKVDRLITELKLPP DAYHKLR+ LE++NNHI+A SSTAG VQIIDP+AGNVCFASAS
Sbjct: 268 VINKVDRLITELKLPPKDAYHKLRHTLELINNHISAASSTAGNVQIIDPAAGNVCFASAS 327

Query: 448 DGWSFTLQSFAKLYVKLHDVPFDASKFASRLWGDRYYHPNTKVFERKPPVNGGDRSFVQF 269
            GWSFTLQSFAKLYVKLH VPFDA+KFASRLWGD YYHP+ +VF +KPP +GG+RSFVQF
Sbjct: 328 AGWSFTLQSFAKLYVKLHGVPFDANKFASRLWGDMYYHPDARVFRKKPPASGGERSFVQF 387

Query: 268 ILEPLYKIYSQVIGENKRSVEATLEELGVKLPNAAYGLNVRPLLRLACSSVFGSATGFTD 89
           +LEPLYKIYSQVIGE+K+SVE+TL ELGV L NAAY LNVRPLLRLACSSVFGSATGFTD
Sbjct: 388 VLEPLYKIYSQVIGEHKKSVESTLAELGVTLSNAAYKLNVRPLLRLACSSVFGSATGFTD 447

Query: 88  MLVQHIPSAKEAAASKVEHIYSGPRDSSV 2
           MLVQHIPSAK+AAA KV+HIY+GP+DS++
Sbjct: 448 MLVQHIPSAKDAAAKKVDHIYTGPKDSAI 476


>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
           [Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
           small nuclear ribonucleoprotein component, putative
           [Ricinus communis]
          Length = 992

 Score =  353 bits (906), Expect = 1e-95
 Identities = 168/209 (80%), Positives = 192/209 (91%)
 Frame = -1

Query: 628 VINKVDRLITELKLPPNDAYHKLRNILEVVNNHITAVSSTAGAVQIIDPSAGNVCFASAS 449
           VINKVDRLITELKLPP DAYHKLR+ LEV+NNHITA SSTAG+VQ+IDP+AGNVCFASA+
Sbjct: 271 VINKVDRLITELKLPPKDAYHKLRHTLEVINNHITAGSSTAGSVQVIDPAAGNVCFASAN 330

Query: 448 DGWSFTLQSFAKLYVKLHDVPFDASKFASRLWGDRYYHPNTKVFERKPPVNGGDRSFVQF 269
            GWSFTLQSFAKLY+KLH +PFDA KFASRLWGD YYHP+T+ F++K P +GG+RSFV F
Sbjct: 331 AGWSFTLQSFAKLYLKLHGIPFDADKFASRLWGDWYYHPDTRAFKKKSPASGGERSFVHF 390

Query: 268 ILEPLYKIYSQVIGENKRSVEATLEELGVKLPNAAYGLNVRPLLRLACSSVFGSATGFTD 89
           +LEPLYKIYSQVIGE+K+SVEATL ELGV LPNAAY LNVRPLLRLACS VFGSA+GFTD
Sbjct: 391 VLEPLYKIYSQVIGEHKKSVEATLAELGVTLPNAAYKLNVRPLLRLACSRVFGSASGFTD 450

Query: 88  MLVQHIPSAKEAAASKVEHIYSGPRDSSV 2
           MLVQHIPSAK AAA KV+H+Y+GP+DS++
Sbjct: 451 MLVQHIPSAKNAAAKKVDHVYTGPKDSTI 479


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
           predicted protein [Populus trichocarpa]
          Length = 869

 Score =  340 bits (872), Expect = 1e-91
 Identities = 160/209 (76%), Positives = 187/209 (89%)
 Frame = -1

Query: 628 VINKVDRLITELKLPPNDAYHKLRNILEVVNNHITAVSSTAGAVQIIDPSAGNVCFASAS 449
           VINKVDRLITELKLPP DAYHKLR+ +EV+NNHI+AVSSTAG VQ+IDP+AGNVCFA A+
Sbjct: 268 VINKVDRLITELKLPPKDAYHKLRHTIEVINNHISAVSSTAGNVQVIDPAAGNVCFAGAT 327

Query: 448 DGWSFTLQSFAKLYVKLHDVPFDASKFASRLWGDRYYHPNTKVFERKPPVNGGDRSFVQF 269
            GWSFTL SFA+LY+KLH +PFDA KFASRLWGD YY+P  + F++KPP +G +RSFVQF
Sbjct: 328 AGWSFTLHSFARLYLKLHGIPFDAEKFASRLWGDMYYNPEDRTFKKKPPASGAERSFVQF 387

Query: 268 ILEPLYKIYSQVIGENKRSVEATLEELGVKLPNAAYGLNVRPLLRLACSSVFGSATGFTD 89
           +LEPLYKIYSQVIGE+K+SVEATL E GV LPN+AY LNVRPLLRLACS VFGSA+GFTD
Sbjct: 388 VLEPLYKIYSQVIGEHKKSVEATLAEFGVTLPNSAYKLNVRPLLRLACSQVFGSASGFTD 447

Query: 88  MLVQHIPSAKEAAASKVEHIYSGPRDSSV 2
           MLV+HIPSAK+AAA KV+H Y+GP+DS +
Sbjct: 448 MLVKHIPSAKDAAARKVDHTYTGPKDSMI 476


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Cucumis sativus]
           gi|449493675|ref|XP_004159406.1| PREDICTED: 116 kDa U5
           small nuclear ribonucleoprotein component-like [Cucumis
           sativus]
          Length = 988

 Score =  339 bits (870), Expect = 2e-91
 Identities = 160/209 (76%), Positives = 189/209 (90%)
 Frame = -1

Query: 628 VINKVDRLITELKLPPNDAYHKLRNILEVVNNHITAVSSTAGAVQIIDPSAGNVCFASAS 449
           VINKVDRLITELKLPP DAY+KLR+ LE++NNHI+A SSTAG VQ+IDP+AGNVCFASA+
Sbjct: 268 VINKVDRLITELKLPPRDAYYKLRHTLEIINNHISAASSTAGNVQVIDPAAGNVCFASAT 327

Query: 448 DGWSFTLQSFAKLYVKLHDVPFDASKFASRLWGDRYYHPNTKVFERKPPVNGGDRSFVQF 269
            GWSFTLQSFAKLYVKLH +PFDA KFA+RLWGD YYHP+T+ F++K P +GG+RSFVQF
Sbjct: 328 AGWSFTLQSFAKLYVKLHGIPFDADKFATRLWGDYYYHPDTRGFKKKQPASGGERSFVQF 387

Query: 268 ILEPLYKIYSQVIGENKRSVEATLEELGVKLPNAAYGLNVRPLLRLACSSVFGSATGFTD 89
           +LEPLYKIYSQVIGE+++SVE TL ELGV L NAAY LNVRPLLRLACSSVFG A+GFTD
Sbjct: 388 VLEPLYKIYSQVIGEHRKSVETTLAELGVTLSNAAYKLNVRPLLRLACSSVFGGASGFTD 447

Query: 88  MLVQHIPSAKEAAASKVEHIYSGPRDSSV 2
           MLVQHIPS ++A++ KV+HIY+GP+DS +
Sbjct: 448 MLVQHIPSPRDASSRKVDHIYTGPKDSMI 476


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