BLASTX nr result
ID: Papaver22_contig00005355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00005355
(831 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera] 172 6e-41
ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|2... 162 9e-38
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu... 159 1e-36
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ... 157 3e-36
ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi... 153 4e-35
>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
Length = 490
Score = 172 bits (437), Expect = 6e-41
Identities = 78/104 (75%), Positives = 91/104 (87%)
Frame = -1
Query: 825 IREDCHLYPDMPAYRSIAVTLGKAGYVKELTNIIECMRHKPLKKIKNMCRKNWDPSLEPD 646
+R DCH+YPDM AY S+AVTLG+AG +KEL NIIECMR KP K+IKNMCRKNW+ LEPD
Sbjct: 261 MRGDCHIYPDMAAYHSVAVTLGQAGLLKELLNIIECMRQKPPKRIKNMCRKNWNALLEPD 320
Query: 645 MVVYNAVLNACVPPQQWKAVSWVLQQIRKGSLKPDGATYGLAME 514
+V++NAVLNACVP QQWK VSWV +Q+RK SLKP+GATYGLAME
Sbjct: 321 VVIFNAVLNACVPTQQWKGVSWVFKQLRKCSLKPNGATYGLAME 364
>ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|222853797|gb|EEE91344.1|
predicted protein [Populus trichocarpa]
Length = 504
Score = 162 bits (410), Expect = 9e-38
Identities = 72/105 (68%), Positives = 85/105 (80%)
Frame = -1
Query: 825 IREDCHLYPDMPAYRSIAVTLGKAGYVKELTNIIECMRHKPLKKIKNMCRKNWDPSLEPD 646
+RED +YPDM AY SIAVTLG+ G +KEL +IECMR KP K+I M KNWDP LEPD
Sbjct: 178 MREDRRIYPDMAAYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPVLEPD 237
Query: 645 MVVYNAVLNACVPPQQWKAVSWVLQQIRKGSLKPDGATYGLAMEI 511
+V+YNA+LNACVP QQWK VSWV QQ+R+ LKP+GATYGLAME+
Sbjct: 238 LVIYNAILNACVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEV 282
Score = 55.8 bits (133), Expect(3) = 3e-12
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -1
Query: 198 QWEYFEYVYKEMHLCGFQLDQNKHAWPLVQASIAGK 91
QWEYFEYVYKEM G+QLDQ KHA LV+AS +GK
Sbjct: 468 QWEYFEYVYKEMSFSGYQLDQIKHAPLLVEASRSGK 503
Score = 35.8 bits (81), Expect(3) = 3e-12
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -2
Query: 449 CLS--KQMKNHCARNIGTINGILKVYRHSE 366
C+S + MK HC NIGTIN +LKVY S+
Sbjct: 398 CISIFEHMKAHCVPNIGTINTMLKVYSRSD 427
Score = 25.8 bits (55), Expect(3) = 3e-12
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 244 DVYPYSSMLEASARA 200
D Y YSSMLE SARA
Sbjct: 452 DGYTYSSMLEVSARA 466
>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
gi|223535436|gb|EEF37106.1| GTP binding protein,
putative [Ricinus communis]
Length = 1010
Score = 159 bits (401), Expect = 1e-36
Identities = 71/105 (67%), Positives = 86/105 (81%)
Frame = -1
Query: 825 IREDCHLYPDMPAYRSIAVTLGKAGYVKELTNIIECMRHKPLKKIKNMCRKNWDPSLEPD 646
+RED +LYPDM AY IAVTLG+AG +KEL I+ECM+ +P K+I MC K WDP LEPD
Sbjct: 411 MREDHNLYPDMAAYHVIAVTLGQAGNLKELLKIVECMKQQPSKRINKMCYKRWDPVLEPD 470
Query: 645 MVVYNAVLNACVPPQQWKAVSWVLQQIRKGSLKPDGATYGLAMEI 511
+V+YNAVLNACVP QQWK V+WV +Q+RK LKP+GATYGLAME+
Sbjct: 471 IVIYNAVLNACVPTQQWKGVAWVFEQLRKSGLKPNGATYGLAMEV 515
Score = 75.5 bits (184), Expect(4) = 6e-20
Identities = 34/45 (75%), Positives = 37/45 (82%)
Frame = -1
Query: 198 QWEYFEYVYKEMHLCGFQLDQNKHAWPLVQASIAGKWHLLEHAFD 64
QWEYFE VYKEM CG+QLDQ KHA LV+AS GK+HLLEHAFD
Sbjct: 701 QWEYFELVYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFD 745
Score = 30.8 bits (68), Expect(4) = 6e-20
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -2
Query: 449 CLS--KQMKNHCARNIGTINGILKVYRHSE 366
C+S + MK +C NIGTIN +LKVY ++
Sbjct: 631 CISIFEYMKAYCVPNIGTINIMLKVYGRND 660
Score = 29.6 bits (65), Expect(4) = 6e-20
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -2
Query: 56 LEAGEIPHSSLVTEMVCQ 3
LEAGEIPH L TEMV Q
Sbjct: 748 LEAGEIPHHLLFTEMVFQ 765
Score = 27.3 bits (59), Expect(4) = 6e-20
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 292 DVSDANSNGGRSHLALDVYPYSSMLEASARA 200
++ N++G ++L D + YSSMLEASA A
Sbjct: 671 EIKGTNNDG--TYLVPDEFTYSSMLEASASA 699
>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509586|gb|AES90728.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 877
Score = 157 bits (397), Expect = 3e-36
Identities = 73/99 (73%), Positives = 86/99 (86%)
Frame = -1
Query: 807 LYPDMPAYRSIAVTLGKAGYVKELTNIIECMRHKPLKKIKNMCRKNWDPSLEPDMVVYNA 628
+YPDM AY SIAVTLG+AG +KEL NI+ECMR KP + +K M RKNWDP+LEPD+V+YNA
Sbjct: 293 VYPDMAAYHSIAVTLGQAGLLKELLNIVECMRQKP-ETLKYMYRKNWDPTLEPDVVIYNA 351
Query: 627 VLNACVPPQQWKAVSWVLQQIRKGSLKPDGATYGLAMEI 511
VLNACVP +QWK VSWV QQ+RK SLKP+GATYGLAME+
Sbjct: 352 VLNACVPSKQWKGVSWVFQQMRKSSLKPNGATYGLAMEV 390
Score = 75.5 bits (184), Expect(4) = 1e-19
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = -1
Query: 201 HQWEYFEYVYKEMHLCGFQLDQNKHAWPLVQASIAGKWHLLEHAFDTI 58
HQWEYFE+VYKEM L G+ LDQNKH LV+AS AGK HLLEHAFD +
Sbjct: 572 HQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHLLEHAFDMV 619
Score = 37.4 bits (85), Expect(4) = 1e-19
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = -2
Query: 449 CLSKQMKNHCARNIGTINGILKVYRHSE 366
C+ + M++HCA N+GT+N +LKVY ++
Sbjct: 508 CIFEYMQDHCAPNVGTVNTMLKVYSQND 535
Score = 25.0 bits (53), Expect(4) = 1e-19
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 62 LFLEAGEIPHSSLVTEMVCQ 3
+ LEAGEIPH E+V Q
Sbjct: 618 MVLEAGEIPHHLFFFELVIQ 637
Score = 24.3 bits (51), Expect(4) = 1e-19
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 262 RSHLALDVYPYSSMLEASAR 203
+S L D Y Y+ MLEAS+R
Sbjct: 551 KSDLRPDAYTYNLMLEASSR 570
>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Glycine max]
Length = 865
Score = 153 bits (387), Expect = 4e-35
Identities = 71/105 (67%), Positives = 85/105 (80%)
Frame = -1
Query: 825 IREDCHLYPDMPAYRSIAVTLGKAGYVKELTNIIECMRHKPLKKIKNMCRKNWDPSLEPD 646
+RE H+YPD+ AY S+AVTLG+AG +KEL NI+ECMR KP M RKNWDP LEPD
Sbjct: 267 MRESIHIYPDIAAYHSVAVTLGQAGLLKELLNIVECMRQKPKAF---MHRKNWDPVLEPD 323
Query: 645 MVVYNAVLNACVPPQQWKAVSWVLQQIRKGSLKPDGATYGLAMEI 511
+V+YNAVLNACVP +QWK VSWV +Q+RK LKP+GATYGLAME+
Sbjct: 324 VVIYNAVLNACVPSKQWKGVSWVFKQLRKSGLKPNGATYGLAMEV 368
Score = 71.6 bits (174), Expect(3) = 1e-16
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = -1
Query: 252 LPWTYTRTAQCLRPLLEHQWEYFEYVYKEMHLCGFQLDQNKHAWPLVQASIAGKWHLLEH 73
+P Y+ + QWEYFE+VY+EM + G+QLDQ+KH LV+AS AGK HLLEH
Sbjct: 544 VPDVYSYNSMLEASATAQQWEYFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEH 603
Query: 72 AFDTI 58
AFD I
Sbjct: 604 AFDMI 608
Score = 35.4 bits (80), Expect(3) = 1e-16
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 449 CLSKQMKNHCARNIGTINGILKVYRHSE 366
C+ + MK HC NIG IN +LKVY ++
Sbjct: 486 CIFEYMKEHCVPNIGAINTMLKVYGQND 513
Score = 25.4 bits (54), Expect(3) = 1e-16
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 62 LFLEAGEIPHSSLVTEMVCQ 3
+ LEAGEIPH E+V Q
Sbjct: 607 MILEAGEIPHHLFFFELVIQ 626