BLASTX nr result

ID: Papaver22_contig00005317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005317
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21551.3| unnamed protein product [Vitis vinifera]              163   3e-38
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   163   3e-38
ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucu...   154   9e-36
ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucu...   154   9e-36

>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  163 bits (412), Expect = 3e-38
 Identities = 84/141 (59%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
 Frame = -1

Query: 613 DHVGVQXXXXXXXXXXXXXXXGLSLNAQSRAMLMQKLDRTGVATSIVGSLGVPMVNGQGP 434
           DH+GVQ               GLSLNAQSRA+LMQKLDRTG+A+SI GSLGVPM+NG  P
Sbjct: 313 DHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGIASSIAGSLGVPMLNGSAP 372

Query: 433 VQPIVGLPLNLQAGI----VPALAAPTP-SEPIGNPSECLLLKNMFDPASETEPDFDLDI 269
            Q  + L +N QA +    +P     +P SEP+G P+ECLLLKNMFDPA+E +PDFDLDI
Sbjct: 373 NQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDI 432

Query: 268 RDEVQEECSQFGPVKHCYVDK 206
           ++EVQEECS FG VKH YV+K
Sbjct: 433 KEEVQEECSNFGRVKHIYVEK 453


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  163 bits (412), Expect = 3e-38
 Identities = 84/141 (59%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
 Frame = -1

Query: 613 DHVGVQXXXXXXXXXXXXXXXGLSLNAQSRAMLMQKLDRTGVATSIVGSLGVPMVNGQGP 434
           DH+GVQ               GLSLNAQSRA+LMQKLDRTG+A+SI GSLGVPM+NG  P
Sbjct: 351 DHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGIASSIAGSLGVPMLNGSAP 410

Query: 433 VQPIVGLPLNLQAGI----VPALAAPTP-SEPIGNPSECLLLKNMFDPASETEPDFDLDI 269
            Q  + L +N QA +    +P     +P SEP+G P+ECLLLKNMFDPA+E +PDFDLDI
Sbjct: 411 NQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDI 470

Query: 268 RDEVQEECSQFGPVKHCYVDK 206
           ++EVQEECS FG VKH YV+K
Sbjct: 471 KEEVQEECSNFGRVKHIYVEK 491


>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  160 bits (404), Expect = 2e-37
 Identities = 80/119 (67%), Positives = 96/119 (80%), Gaps = 5/119 (4%)
 Frame = -1

Query: 547 LSLNAQSRAMLMQKLDRTGVATSIVGSLGVPMVNGQGPVQPIVGLPLNLQAGI----VPA 380
           L+LNAQSRA+LMQKLDRTG ATSI GSLGVP++NG  P Q  + LP+N Q  I     PA
Sbjct: 225 LALNAQSRALLMQKLDRTGTATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPA 284

Query: 379 LAAPTPS-EPIGNPSECLLLKNMFDPASETEPDFDLDIRDEVQEECSQFGPVKHCYVDK 206
           L  P+P+ E IG PSECLLLKNMFDPA+ETEPDFDLDI+++V+EECS++G VKH +VDK
Sbjct: 285 LVLPSPAYESIGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDK 343


>ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  154 bits (390), Expect = 9e-36
 Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
 Frame = -1

Query: 613 DHVGVQXXXXXXXXXXXXXXXGLSLNAQSRAMLMQKLDRTGVATSIVGSLGVPMVNGQGP 434
           DH+G Q               GL+LNAQSRA+LMQKLDRTG+ATSI GSLG P++NG  P
Sbjct: 409 DHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAP 468

Query: 433 VQPIVGLPLNLQAGI----VPALAAPTPSEPIGNPSECLLLKNMFDPASETEPDFDLDIR 266
            Q    LP+N QA +    +PA   P   + +G+PSECLLLKNMFDP++ET PDFD++I+
Sbjct: 469 NQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 528

Query: 265 DEVQEECSQFGPVKHCYVDK 206
           ++V+EECS++G VKH YVDK
Sbjct: 529 EDVEEECSKYGRVKHIYVDK 548


>ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  154 bits (390), Expect = 9e-36
 Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
 Frame = -1

Query: 613 DHVGVQXXXXXXXXXXXXXXXGLSLNAQSRAMLMQKLDRTGVATSIVGSLGVPMVNGQGP 434
           DH+G Q               GL+LNAQSRA+LMQKLDRTG+ATSI GSLG P++NG  P
Sbjct: 409 DHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNGSAP 468

Query: 433 VQPIVGLPLNLQAGI----VPALAAPTPSEPIGNPSECLLLKNMFDPASETEPDFDLDIR 266
            Q    LP+N QA +    +PA   P   + +G+PSECLLLKNMFDP++ET PDFD++I+
Sbjct: 469 NQRSTSLPVNGQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDMEIK 528

Query: 265 DEVQEECSQFGPVKHCYVDK 206
           ++V+EECS++G VKH YVDK
Sbjct: 529 EDVEEECSKYGRVKHIYVDK 548


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