BLASTX nr result

ID: Papaver22_contig00005243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005243
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   266   7e-69
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              266   7e-69
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   263   5e-68
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   263   5e-68
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   260   3e-67

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  266 bits (679), Expect = 7e-69
 Identities = 143/243 (58%), Positives = 169/243 (69%)
 Frame = -2

Query: 960 PNVGKSLLIKSLASYFFHEHRYDDIRGPITIRTDTNRRIQFVECPDDISGMIDAAKYADL 781
           P VGKSLLIKSL  ++  +H   ++RGPITI +  NRR+QFVECP+DI+GMIDAAK+ADL
Sbjct: 95  PQVGKSLLIKSLVKHYT-KHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADL 153

Query: 780 VLLLVDASYGFEAETFEFLNLLQAHGCSKVMGVLTHLDKFNDEKELEETKERLHDNFRTE 601
            LLL+D SYGFE ETFEFLN+LQ HG  KVMGVLTHLDKF D K+L++TK+RL   F TE
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTE 213

Query: 600 IDPLLKVYDLSGFDDYDDLYKFRGIKELAIDISRIQIPSSSLPSRHPYVLVHRFEDVTPL 421
           I    K++ LSG       Y  R I  LA  IS ++    S  + HPY+LV RFEDVTP 
Sbjct: 214 IYDGAKLFYLSGL--VHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPP 271

Query: 420 EEVQKDANCKRNIFLYGYLRGCNINSGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEEN 241
           E VQ +  C RNI LYGYLRGCN+  G KVHIAG GD  LA VT  ADP PL    K++ 
Sbjct: 272 ERVQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKG 331

Query: 240 LVD 232
           L D
Sbjct: 332 LRD 334



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
 Frame = -2

Query: 345 SGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEE-------NLVDPTHMEIESFRTGTYL 187
           +G+K H       R A+ +   D     +E++++       +L + T +E+E FRTGTYL
Sbjct: 689 NGSKFH------HRQANESGFFDKLKEEVELRKQMNMAELNDLDEETRIEVEGFRTGTYL 742

Query: 186 RLEVCNIPSGMVENYNPCHPILVGGISDEEENVGYM 79
           RLEV ++P  MVE+++P HP+LVGGI   EENVGYM
Sbjct: 743 RLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYM 778


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  266 bits (679), Expect = 7e-69
 Identities = 143/243 (58%), Positives = 169/243 (69%)
 Frame = -2

Query: 960 PNVGKSLLIKSLASYFFHEHRYDDIRGPITIRTDTNRRIQFVECPDDISGMIDAAKYADL 781
           P VGKSLLIKSL  ++  +H   ++RGPITI +  NRR+QFVECP+DI+GMIDAAK+ADL
Sbjct: 95  PQVGKSLLIKSLVKHYT-KHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADL 153

Query: 780 VLLLVDASYGFEAETFEFLNLLQAHGCSKVMGVLTHLDKFNDEKELEETKERLHDNFRTE 601
            LLL+D SYGFE ETFEFLN+LQ HG  KVMGVLTHLDKF D K+L++TK+RL   F TE
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTE 213

Query: 600 IDPLLKVYDLSGFDDYDDLYKFRGIKELAIDISRIQIPSSSLPSRHPYVLVHRFEDVTPL 421
           I    K++ LSG       Y  R I  LA  IS ++    S  + HPY+LV RFEDVTP 
Sbjct: 214 IYDGAKLFYLSGL--VHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPP 271

Query: 420 EEVQKDANCKRNIFLYGYLRGCNINSGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEEN 241
           E VQ +  C RNI LYGYLRGCN+  G KVHIAG GD  LA VT  ADP PL    K++ 
Sbjct: 272 ERVQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKKG 331

Query: 240 LVD 232
           L D
Sbjct: 332 LRD 334



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
 Frame = -2

Query: 354  NINSGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEE-------NLVDPTHMEIESFRTG 196
            N   G+K H       R A+ +   D     +E++++       +L + T +E+E FRTG
Sbjct: 852  NAEHGSKFH------HRQANESGFFDKLKEEVELRKQMNMAELNDLDEETRIEVEGFRTG 905

Query: 195  TYLRLEVCNIPSGMVENYNPCHPILVGGISDEEENVGYM 79
            TYLRLEV ++P  MVE+++P HP+LVGGI   EENVGYM
Sbjct: 906  TYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYM 944


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  263 bits (672), Expect = 5e-68
 Identities = 141/243 (58%), Positives = 168/243 (69%)
 Frame = -2

Query: 960 PNVGKSLLIKSLASYFFHEHRYDDIRGPITIRTDTNRRIQFVECPDDISGMIDAAKYADL 781
           P VGKSLLIKSL  ++  +H   D+RGPITI +   RR+QFVECP++I+GMIDAAK+ADL
Sbjct: 96  PQVGKSLLIKSLVKHYT-KHNLPDVRGPITIVSGKQRRLQFVECPNEINGMIDAAKFADL 154

Query: 780 VLLLVDASYGFEAETFEFLNLLQAHGCSKVMGVLTHLDKFNDEKELEETKERLHDNFRTE 601
            LLL+D +YGFE ETFEFLN+L  HG  KVMGVLTHLDKF D K+L +TK+RL   F TE
Sbjct: 155 TLLLIDGAYGFEMETFEFLNILHNHGLPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTE 214

Query: 600 IDPLLKVYDLSGFDDYDDLYKFRGIKELAIDISRIQIPSSSLPSRHPYVLVHRFEDVTPL 421
           I    K++ LSG       Y  R +  LA  IS ++    S  + HPYVLV RFEDVTP 
Sbjct: 215 IRTGAKLFYLSGL--VHGKYPKREVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPP 272

Query: 420 EEVQKDANCKRNIFLYGYLRGCNINSGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEEN 241
           E V  +  C RNI LYGYLRGCN+  G KVHIAG GDF LASVT+ ADP PL    K++ 
Sbjct: 273 ERVHTNNKCDRNITLYGYLRGCNLKYGTKVHIAGVGDFELASVTNLADPCPLPSAAKKKG 332

Query: 240 LVD 232
           L D
Sbjct: 333 LRD 335


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score =  263 bits (672), Expect = 5e-68
 Identities = 141/243 (58%), Positives = 168/243 (69%)
 Frame = -2

Query: 960 PNVGKSLLIKSLASYFFHEHRYDDIRGPITIRTDTNRRIQFVECPDDISGMIDAAKYADL 781
           P VGKSLLIKSL  ++  +H   D+RGPITI +   RR+QFVECP++I+GMIDAAK+ADL
Sbjct: 96  PQVGKSLLIKSLVKHYT-KHNLPDVRGPITIVSGKQRRLQFVECPNEINGMIDAAKFADL 154

Query: 780 VLLLVDASYGFEAETFEFLNLLQAHGCSKVMGVLTHLDKFNDEKELEETKERLHDNFRTE 601
            LLL+D +YGFE ETFEFLN+L  HG  KVMGVLTHLDKF D K+L +TK+RL   F TE
Sbjct: 155 TLLLIDGAYGFEMETFEFLNILHNHGLPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTE 214

Query: 600 IDPLLKVYDLSGFDDYDDLYKFRGIKELAIDISRIQIPSSSLPSRHPYVLVHRFEDVTPL 421
           I    K++ LSG       Y  R +  LA  IS ++    S  + HPYVLV RFEDVTP 
Sbjct: 215 IRTGAKLFYLSGL--VHGKYPKREVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPP 272

Query: 420 EEVQKDANCKRNIFLYGYLRGCNINSGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEEN 241
           E V  +  C RNI LYGYLRGCN+  G KVHIAG GDF LASVT+ ADP PL    K++ 
Sbjct: 273 ERVHTNNKCDRNITLYGYLRGCNLKYGTKVHIAGVGDFELASVTNLADPCPLPSAAKKKG 332

Query: 240 LVD 232
           L D
Sbjct: 333 LRD 335



 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 27/56 (48%), Positives = 41/56 (73%)
 Frame = -2

Query: 246 ENLVDPTHMEIESFRTGTYLRLEVCNIPSGMVENYNPCHPILVGGISDEEENVGYM 79
           +N+ +   ++IE F++GTY+RLEV  +   MVE+++PC PILVGGI   E++ GYM
Sbjct: 781 DNIDEAFRLKIEGFQSGTYVRLEVHGVSCEMVEHFDPCQPILVGGIGPGEDDAGYM 836


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  260 bits (665), Expect = 3e-67
 Identities = 140/243 (57%), Positives = 168/243 (69%)
 Frame = -2

Query: 960 PNVGKSLLIKSLASYFFHEHRYDDIRGPITIRTDTNRRIQFVECPDDISGMIDAAKYADL 781
           P VGKSLLIKSL  ++  +H   ++RGPITI +   RR+QFVECP+DI+GMIDAAK+ADL
Sbjct: 95  PQVGKSLLIKSLVKHYT-KHNLPEVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADL 153

Query: 780 VLLLVDASYGFEAETFEFLNLLQAHGCSKVMGVLTHLDKFNDEKELEETKERLHDNFRTE 601
            LLL+D SYGFE ETFEFLN+LQ HG  KVMGVLTHLDKF D K+L +TK+RL   F TE
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTE 213

Query: 600 IDPLLKVYDLSGFDDYDDLYKFRGIKELAIDISRIQIPSSSLPSRHPYVLVHRFEDVTPL 421
           I    K++ LSG       Y  R I  LA  IS ++    S  + HPYVLV RFEDVTP 
Sbjct: 214 IYDGAKLFYLSGL--IHGKYPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPP 271

Query: 420 EEVQKDANCKRNIFLYGYLRGCNINSGAKVHIAGAGDFRLASVTSSADPFPLSIEMKEEN 241
           E+V  +    RN+ LYGYLRGCN+  G KVHIAG GD+ LA VT+ ADP PL    K++ 
Sbjct: 272 EQVHMNRKSDRNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKKKG 331

Query: 240 LVD 232
           L D
Sbjct: 332 LRD 334



 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -2

Query: 243 NLVDPTHMEIESFRTGTYLRLEVCNIPSGMVENYNPCHPILVGGISDEEENVGYM 79
           +L + T +EIE F+TGTY+RLEV ++P  MVE+++PCHPILVGGI   EENVGYM
Sbjct: 724 DLDEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPILVGGIGFGEENVGYM 778


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