BLASTX nr result

ID: Papaver22_contig00005155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00005155
         (1970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF78276.1|AC020576_20 Contains similarity to formin binding ...   102   5e-19
ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arab...   101   6e-19
ref|XP_002966973.1| hypothetical protein SELMODRAFT_439841 [Sela...   101   8e-19
gb|EEC70813.1| hypothetical protein OsI_02277 [Oryza sativa Indi...   101   8e-19
ref|NP_175113.2| pre-mRNA-processing protein 40A [Arabidopsis th...   100   2e-18

>gb|AAF78276.1|AC020576_20 Contains similarity to formin binding protein 11 from Mus musculus
            gb|AF135439 and contains multiple FF PF|01846 and WW
            PF|00397 domains. EST gb|AI997587 comes from this gene
            [Arabidopsis thaliana]
          Length = 919

 Score =  102 bits (253), Expect = 5e-19
 Identities = 68/206 (33%), Positives = 118/206 (57%), Gaps = 38/206 (18%)
 Frame = -3

Query: 771  KRAQIAFIELLESVKVEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYIKERRIV-- 598
            + A+ AF  LLESV V  +WTW+QT+K I  D+R+GAL+T  +R+ AF+EY+ +R+ V  
Sbjct: 421  QEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEA 480

Query: 597  --------KAREDFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDVPE-HEWEEIFDEFM 445
                    KARE+FVKMLEE ++L  S  W KAM  F++D+R + V    + E++FD ++
Sbjct: 481  EERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNYI 540

Query: 444  LDRTKKLSE---DQDWTYV--------------MGKKGRKMTVQREDN--------ADKL 340
            ++  +K  E   ++   Y+               G + RK+  + ED+         D+L
Sbjct: 541  VELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRL 600

Query: 339  LQKQKIMADIERAKAEV--LDQIRDL 268
            +  ++ + D+E+ + E+  +++++DL
Sbjct: 601  IGFEEYILDLEKEEEELKRVEKLKDL 626


>ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arabidopsis lyrata subsp.
           lyrata] gi|297337146|gb|EFH67563.1| hypothetical protein
           ARALYDRAFT_891421 [Arabidopsis lyrata subsp. lyrata]
          Length = 967

 Score =  101 bits (252), Expect = 6e-19
 Identities = 67/196 (34%), Positives = 109/196 (55%), Gaps = 36/196 (18%)
 Frame = -3

Query: 771 KRAQIAFIELLESVKVEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYIKERRIV-- 598
           + A+ AF  LLESV V  +WTW+QT+K I  D+R+GAL+T  +R+ AF+EY+ +R+ V  
Sbjct: 406 QEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEA 465

Query: 597 --------KAREDFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDVPE-HEWEEIFDEFM 445
                   KARE+FVKMLEE ++L  S  W KAM  F++D+R + V    + E++FD ++
Sbjct: 466 EERRRRQKKAREEFVKMLEECEELSSSMKWSKAMSLFENDERFKAVDRPRDREDLFDNYV 525

Query: 444 LDRTKKLSED----------------QDWTYV-MGKKGRKMTVQREDN--------ADKL 340
           ++  +K  E                 +   Y+  G + RK+  + ED+         D+L
Sbjct: 526 VELERKEREKAAEEHRQHMAEYRKFLETCDYIKAGTQWRKIQERLEDDERCSCLEKIDRL 585

Query: 339 LQKQKIMADIERAKAE 292
           +  ++ M D+E+ + E
Sbjct: 586 IGFEEYMLDLEKEEEE 601


>ref|XP_002966973.1| hypothetical protein SELMODRAFT_439841 [Selaginella moellendorffii]
           gi|300164964|gb|EFJ31572.1| hypothetical protein
           SELMODRAFT_439841 [Selaginella moellendorffii]
          Length = 809

 Score =  101 bits (251), Expect = 8e-19
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 36/194 (18%)
 Frame = -3

Query: 765 AQIAFIELLESVKVEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYIKERRIV---- 598
           A+ AF ELLE++ V+ +WTW Q ++VI  D+R+GAL++  +R+ AF+EY+ +R+ +    
Sbjct: 257 AKSAFKELLEAMHVQSDWTWDQAMRVIINDKRYGALKSLGERKQAFNEYLAQRKKLDLEE 316

Query: 597 ------KAREDFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDV-PEHEWEEIFDEFMLD 439
                 KAREDF+KMLEESK+L  +  W K +  F+ D R   V  E E E++FD+++LD
Sbjct: 317 KRLKQKKAREDFIKMLEESKELTSAMRWSKVVSLFESDPRFHAVDKEREREDLFDDYLLD 376

Query: 438 RTKK-------------------------LSEDQDWTYVMGKKGRKMTVQREDNADKLLQ 334
             +K                         +  +  W  +  K        R D  D+L  
Sbjct: 377 LERKERDKAREEKKKSRADFRSYLESCDFIKVNSHWRKIQDKLDDDERWSRLDKMDRLEV 436

Query: 333 KQKIMADIERAKAE 292
            Q+ + D+E+ + E
Sbjct: 437 FQEYIRDLEKEEEE 450



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
 Frame = -3

Query: 771 KRAQIAFIELLESVK-VEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYI-----KE 610
           K+A+  FI++LE  K +     W + V + + D RF A+    +R+  F +Y+     KE
Sbjct: 322 KKAREDFIKMLEESKELTSAMRWSKVVSLFESDPRFHAVDKEREREDLFDDYLLDLERKE 381

Query: 609 RRIV-----KAREDFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDVPEHEWEEIFDEFM 445
           R        K+R DF   LE    ++V++ W K   K  DD+R   + + +  E+F E++
Sbjct: 382 RDKAREEKKKSRADFRSYLESCDFIKVNSHWRKIQDKLDDDERWSRLDKMDRLEVFQEYI 441

Query: 444 LDRTKKLSEDQDWTYVMGKKGRKMTVQREDNADK 343
            D  K+  E+        KK +K  ++R++  ++
Sbjct: 442 RDLEKEEEEE--------KKMQKEQIRRKERKNR 467


>gb|EEC70813.1| hypothetical protein OsI_02277 [Oryza sativa Indica Group]
          Length = 1026

 Score =  101 bits (251), Expect = 8e-19
 Identities = 55/126 (43%), Positives = 82/126 (65%), Gaps = 11/126 (8%)
 Frame = -3

Query: 765 AQIAFIELLESVKVEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYIKERRIV---- 598
           A+ AF  LLES  VE +WTW Q ++VI  D+R+GAL+T  +R+ AF+EY+ +R+ +    
Sbjct: 410 AKNAFKALLESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQRKKLEAEE 469

Query: 597 ------KAREDFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDVPE-HEWEEIFDEFMLD 439
                 KAR+DF+ MLEESK+L  ST W KA+  F+DD+R   V    E E++F+ ++++
Sbjct: 470 RRIKQRKARDDFLAMLEESKELTSSTRWSKAITMFEDDERFSAVERPREREDLFESYLME 529

Query: 438 RTKKLS 421
             KK S
Sbjct: 530 LQKKTS 535


>ref|NP_175113.2| pre-mRNA-processing protein 40A [Arabidopsis thaliana]
           gi|395406802|sp|B6EUA9.1|PR40A_ARATH RecName:
           Full=Pre-mRNA-processing protein 40A; AltName:
           Full=Mediator of RNA polymerase II transcription subunit
           35a gi|332193941|gb|AEE32062.1| pre-mRNA-processing
           protein 40A [Arabidopsis thaliana]
          Length = 958

 Score =  100 bits (248), Expect = 2e-18
 Identities = 55/129 (42%), Positives = 84/129 (65%), Gaps = 11/129 (8%)
 Frame = -3

Query: 771 KRAQIAFIELLESVKVEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYIKERRIV-- 598
           + A+ AF  LLESV V  +WTW+QT+K I  D+R+GAL+T  +R+ AF+EY+ +R+ V  
Sbjct: 405 QEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEA 464

Query: 597 --------KAREDFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDVPE-HEWEEIFDEFM 445
                   KARE+FVKMLEE ++L  S  W KAM  F++D+R + V    + E++FD ++
Sbjct: 465 EERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNYI 524

Query: 444 LDRTKKLSE 418
           ++  +K  E
Sbjct: 525 VELERKERE 533



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
 Frame = -3

Query: 771  KRAQIAFIELLESVK-VEPNWTWKQTVKVIKKDERFGALQTNLDRQVAFSEYIKE---RR 604
            K+A+  F+++LE  + +  +  W + + + + D+RF A+    DR+  F  YI E   + 
Sbjct: 472  KKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNYIVELERKE 531

Query: 603  IVKARE-------DFVKMLEESKDLRVSTSWPKAMPKFKDDKRCQDVPEHEWEEIFDEFM 445
              KA E       D+ K LE    ++  T W K   + +DD RC  + + +    F+E++
Sbjct: 532  REKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYI 591

Query: 444  LDRTKKLSEDQDWTYVMGKKGRKMTVQREDNADKLLQKQKIMADIERAKAEVLD---QIR 274
            LD    L ++++    + K+  +   ++  +A + L ++ + A I  AK   LD   +++
Sbjct: 592  LD----LEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYCIELK 647

Query: 273  DL 268
            DL
Sbjct: 648  DL 649


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