BLASTX nr result

ID: Papaver22_contig00003992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003992
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   150   6e-34
gb|ABK26743.1| unknown [Picea sitchensis]                             147   6e-33
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   145   1e-32
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...   140   4e-31
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   140   8e-31

>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  150 bits (379), Expect = 6e-34
 Identities = 78/127 (61%), Positives = 85/127 (66%)
 Frame = +1

Query: 139 PTGLLIRNISLDARVEDLRXXFDI*TREAR*KDETK*THP*LDLYGTDNITRVEDLRIPF 318
           P+GLL+RNI+LDAR ED                                      LR+PF
Sbjct: 43  PSGLLVRNIALDARPED--------------------------------------LRVPF 64

Query: 319 ERFGPVKDVYLPKNYYTGEPRGFGFVKFRNADDAAEAKHQMNHQVIGGREITIVYAEENR 498
           ERFGPVKDVYLPKNYYTGEPRGFGFVKFRNA+DAAEAKH +NH VIGGREI IV+AEENR
Sbjct: 65  ERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHLNHSVIGGREIAIVFAEENR 124

Query: 499 KTPQEMR 519
           KTPQEMR
Sbjct: 125 KTPQEMR 131


>gb|ABK26743.1| unknown [Picea sitchensis]
          Length = 252

 Score =  147 bits (370), Expect = 6e-33
 Identities = 79/129 (61%), Positives = 84/129 (65%)
 Frame = +1

Query: 139 PTGLLIRNISLDARVEDLRXXFDI*TREAR*KDETK*THP*LDLYGTDNITRVEDLRIPF 318
           PTGLL+RNISLDAR ED                                      LRIPF
Sbjct: 54  PTGLLVRNISLDARPED--------------------------------------LRIPF 75

Query: 319 ERFGPVKDVYLPKNYYTGEPRGFGFVKFRNADDAAEAKHQMNHQVIGGREITIVYAEENR 498
           ERFGPVKDVYLPKN+YT EPRGFGFVK+RN DDAAEAK  MNHQVIGGREI+IV+AEENR
Sbjct: 76  ERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRHMNHQVIGGREISIVFAEENR 135

Query: 499 KTPQEMRKT 525
           K PQEMR T
Sbjct: 136 KNPQEMRAT 144


>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  145 bits (367), Expect = 1e-32
 Identities = 83/165 (50%), Positives = 94/165 (56%)
 Frame = +1

Query: 34  KRGYDDEPREXXXXXXXXXXXXXXXXXXXXXXXXXPTGLLIRNISLDARVEDLRXXFDI* 213
           ++ YDD+PR+                         P+GLL+RN+ LDAR ED        
Sbjct: 24  RKRYDDDPRDRYRESRSHRDRRSPA----------PSGLLVRNLPLDARPED-------- 65

Query: 214 TREAR*KDETK*THP*LDLYGTDNITRVEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGF 393
                                         LRIPFERFGPVKDVYLPKNYYTGEPRGFGF
Sbjct: 66  ------------------------------LRIPFERFGPVKDVYLPKNYYTGEPRGFGF 95

Query: 394 VKFRNADDAAEAKHQMNHQVIGGREITIVYAEENRKTPQEMRKTT 528
           VKFR A+DAAEAK Q+NH VIGGREI IV+AEENRKTPQEMR T+
Sbjct: 96  VKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTS 140


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  140 bits (354), Expect = 4e-31
 Identities = 74/129 (57%), Positives = 84/129 (65%)
 Frame = +1

Query: 139 PTGLLIRNISLDARVEDLRXXFDI*TREAR*KDETK*THP*LDLYGTDNITRVEDLRIPF 318
           P+GLL+RN+ LDAR ED                                      LR PF
Sbjct: 51  PSGLLVRNLPLDARPED--------------------------------------LRGPF 72

Query: 319 ERFGPVKDVYLPKNYYTGEPRGFGFVKFRNADDAAEAKHQMNHQVIGGREITIVYAEENR 498
           E++GPVKDVYLPKNYYTGEPRGFGFVK+R A+DAAEAK +MNH++IGGREI IVYAEENR
Sbjct: 73  EKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRMNHKIIGGREIRIVYAEENR 132

Query: 499 KTPQEMRKT 525
           KTPQEMR T
Sbjct: 133 KTPQEMRTT 141


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510621|gb|AES91763.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  140 bits (352), Expect = 8e-31
 Identities = 73/130 (56%), Positives = 84/130 (64%)
 Frame = +1

Query: 139 PTGLLIRNISLDARVEDLRXXFDI*TREAR*KDETK*THP*LDLYGTDNITRVEDLRIPF 318
           P+GLL+RN+ LDAR ED                                      LR PF
Sbjct: 47  PSGLLVRNLPLDARPED--------------------------------------LRGPF 68

Query: 319 ERFGPVKDVYLPKNYYTGEPRGFGFVKFRNADDAAEAKHQMNHQVIGGREITIVYAEENR 498
           ER+GPVKDVYLP+NYYTGEPRGFGFVK+R+ +DAAEAK Q+NH +IGGREI IV+AEENR
Sbjct: 69  ERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRIVFAEENR 128

Query: 499 KTPQEMRKTT 528
           KTPQEMR TT
Sbjct: 129 KTPQEMRVTT 138


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