BLASTX nr result

ID: Papaver22_contig00003928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003928
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   150   6e-34
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   148   3e-33
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   148   3e-33
ref|XP_002330007.1| global transcription factor group [Populus t...   147   4e-33
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   147   7e-33

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  150 bits (379), Expect = 6e-34
 Identities = 115/295 (38%), Positives = 158/295 (53%), Gaps = 18/295 (6%)
 Frame = -3

Query: 1149 DKLQMHDKRWV-VTLTDVAILPTVGETG---LGTLEAHLNGFRYSTCC-GRHVDFMHSNV 985
            +KLQ+   R+  + L+D+ I P+ G  G    G+LE+H NGFRYST      VD M+ N+
Sbjct: 667  EKLQLAGTRFKPIRLSDLWIRPSFGGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNI 726

Query: 984  GDYFFGLGHWGT-PLLQFHLKHPIRVGNEVTEDVQFCL-----FQTPLEEVRFGKDSGNV 823
               FF         LL FHL + I VGN+ T+DVQF +      QT     R   D   +
Sbjct: 727  KHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEI 786

Query: 822  RKGKEARDSCR--DEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 661
             + +  RD     + + ++F+++V       QF  G  L F+    Q L E  F+G   K
Sbjct: 787  EEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFK-GLDLEFD----QPLRELGFHGVPHK 841

Query: 660  GGASAIFALTNSALVVLEETPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 484
              ASA    T+S LV L ETPF V+ L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 842  --ASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLR 899

Query: 483  ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 319
            I SIP   L GIK  L+   +KYY +  + NW   ++ ITEDPEKF   GGW+ L
Sbjct: 900  IDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFL 954


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  148 bits (373), Expect = 3e-33
 Identities = 115/295 (38%), Positives = 157/295 (53%), Gaps = 18/295 (6%)
 Frame = -3

Query: 1149 DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHLNGFRYSTCCGRH-VDFMHSNV 985
            +KLQ+   R+  + L ++ I P  G  G    GTLEAHLNGFRY+T      VD M  NV
Sbjct: 673  EKLQLAGNRFKPIRLPELWIRPAFGGRGRKLPGTLEAHLNGFRYATTRSEERVDIMFGNV 732

Query: 984  GDYFFGLG-HWGTPLLQFHLKHPIRVGNEVTEDVQFCL-----FQTPLEEVRFGKDSGNV 823
               FF    +    LL FHL + I VGN+ T+DVQF +      QT     R   D   +
Sbjct: 733  KHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAYDPDEI 792

Query: 822  RKGKEARDSCR--DEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 661
             + +  RD     + + +SF+++V       QF  G  L F+    Q L E  F+G   K
Sbjct: 793  EEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFG-GLDLEFD----QPLRELGFHGVPYK 847

Query: 660  GGASAIFALTNSALVVLEETPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 484
              +SA    T++ LV L ETPF VV L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 848  --SSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNFDMTIVFKDFKRDVLR 905

Query: 483  ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 319
            I SIP   L GIK  L+   +KYY +  + NW + ++ ITEDP+ F   GGW+ L
Sbjct: 906  IDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITEDPQSFIDEGGWEFL 960


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  148 bits (373), Expect = 3e-33
 Identities = 115/295 (38%), Positives = 157/295 (53%), Gaps = 18/295 (6%)
 Frame = -3

Query: 1149 DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHLNGFRYSTCCGRH-VDFMHSNV 985
            +KLQ+   R+  + L ++ I P  G  G    GTLEAHLNGFRY+T      VD M  NV
Sbjct: 673  EKLQLAGNRFKPIRLPELWIRPAFGGRGRKLPGTLEAHLNGFRYATTRSEERVDIMFGNV 732

Query: 984  GDYFFGLG-HWGTPLLQFHLKHPIRVGNEVTEDVQFCL-----FQTPLEEVRFGKDSGNV 823
               FF    +    LL FHL + I VGN+ T+DVQF +      QT     R   D   +
Sbjct: 733  KHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTIGGGKRSAYDPDEI 792

Query: 822  RKGKEARDSCR--DEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 661
             + +  RD     + + +SF+++V       QF  G  L F+    Q L E  F+G   K
Sbjct: 793  EEEQRERDRKNKINMDFQSFVNRVNDLWGQPQFG-GLDLEFD----QPLRELGFHGVPYK 847

Query: 660  GGASAIFALTNSALVVLEETPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 484
              +SA    T++ LV L ETPF VV L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 848  --SSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNFDMTIVFKDFKRDVLR 905

Query: 483  ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 319
            I SIP   L GIK  L+   +KYY +  + NW + ++ ITEDP+ F   GGW+ L
Sbjct: 906  IDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITEDPQSFIDEGGWEFL 960


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score =  147 bits (372), Expect = 4e-33
 Identities = 112/295 (37%), Positives = 158/295 (53%), Gaps = 18/295 (6%)
 Frame = -3

Query: 1149 DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHLNGFRYSTC-CGRHVDFMHSNV 985
            +KLQ+   R+  + LTD+ I P  G  G    G+LEAH+NGFRYST      VD M +N+
Sbjct: 663  EKLQLAGNRFKPIRLTDLWIRPVFGGRGRKLPGSLEAHVNGFRYSTSRAEERVDIMFANI 722

Query: 984  GDYFFGLGHWGT-PLLQFHLKHPIRVGNEVTEDVQFCL-----FQTPLEEVRFGKDSGNV 823
               FF         LL FHL + I VGN+ T+DVQF +      QT     R   D   +
Sbjct: 723  KHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEI 782

Query: 822  RKGKEARDSCR--DEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 661
             + +  R+     + + +SF+++V       QF+ G  L F+    Q L E  F+G   K
Sbjct: 783  EEEQRERERKNKINMDFQSFVNRVNDLWAQPQFS-GLDLEFD----QPLRELGFHGVPHK 837

Query: 660  GGASAIFALTNSALVVLEETPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 484
               ++    T+S LV L ETPF VV L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 838  --VTSFIVPTSSCLVELVETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLR 895

Query: 483  ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 319
            I SIP   L GIK  L+   +KYY +  + NW + ++ IT+DP+ F   GGW+ L
Sbjct: 896  IDSIPSTALDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFL 950


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score =  147 bits (370), Expect = 7e-33
 Identities = 113/295 (38%), Positives = 158/295 (53%), Gaps = 18/295 (6%)
 Frame = -3

Query: 1149 DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHLNGFRYSTC-CGRHVDFMHSNV 985
            +KLQ+ + R+  + L D+ I P  G  G    GTLEAH+NGFRYST      VD M +N+
Sbjct: 665  EKLQLANNRFKPIRLPDLWIRPPFGGRGRKIPGTLEAHVNGFRYSTTRSDERVDVMFANI 724

Query: 984  GDYFFGLG-HWGTPLLQFHLKHPIRVGNEVTEDVQFCL-FQTPLEEVRFGKDSG------ 829
               FF    +    LL FHL + I VGN+ T+DVQF +     ++ V  GK S       
Sbjct: 725  KHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDEL 784

Query: 828  NVRKGKEARDSCRDEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 661
               + +  R +  + E +SF+++V       QF  G  L F+    Q L E  F G   K
Sbjct: 785  EEEQRERERKNKINVEFQSFVNRVNDLWGQPQFN-GLDLEFD----QPLRELGFPGVPHK 839

Query: 660  GGASAIFALTNSALVVLEETPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 484
              +S     T++ LV L ETPF VV L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 840  --SSVFIVPTSACLVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLR 897

Query: 483  ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 319
            I SIP   L GIK  L+   +KYY +  + NW + ++ IT+DP+ F   GGW+ L
Sbjct: 898  IDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFL 952


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