BLASTX nr result

ID: Papaver22_contig00003904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003904
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316148.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   135   3e-30
ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   134   1e-29
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   134   1e-29
ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   132   2e-29

>ref|XP_002316148.1| predicted protein [Populus trichocarpa] gi|222865188|gb|EEF02319.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/93 (75%), Positives = 76/93 (81%)
 Frame = -1

Query: 492 ATAVEPQWLAEMGPMFFSVKDSDTSMLEHKRKQKDEKTAMEEEMENLRKEQAEMEKVNXX 313
           ATAVEPQWLAE+GPMFFSVKDSDTSMLEHKRKQK+EKTAMEEEMENLRK QAE ++ +  
Sbjct: 407 ATAVEPQWLAELGPMFFSVKDSDTSMLEHKRKQKEEKTAMEEEMENLRKVQAETDRESKE 466

Query: 312 XXXXXXXXXXXQISMPGFKKGSSTYLRPKKFGL 214
                      Q+SMPG KKGSSTYLRPKKFGL
Sbjct: 467 KEREKRAKRQQQVSMPGLKKGSSTYLRPKKFGL 499


>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355486522|gb|AES67725.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1269

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/93 (72%), Positives = 77/93 (82%)
 Frame = -1

Query: 492  ATAVEPQWLAEMGPMFFSVKDSDTSMLEHKRKQKDEKTAMEEEMENLRKEQAEMEKVNXX 313
            ATAVEPQW+AE+GPMFFSVK+SDTS+LEHK+KQK EKTAMEEEMENL+KEQAE+E+ N  
Sbjct: 1177 ATAVEPQWMAELGPMFFSVKESDTSLLEHKKKQKREKTAMEEEMENLKKEQAELERENKR 1236

Query: 312  XXXXXXXXXXXQISMPGFKKGSSTYLRPKKFGL 214
                       QIS+PG KKGSST+LRPKKFGL
Sbjct: 1237 KEKEKRAKSQQQISIPGLKKGSSTFLRPKKFGL 1269


>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Glycine max]
          Length = 1272

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/93 (72%), Positives = 75/93 (80%)
 Frame = -1

Query: 492  ATAVEPQWLAEMGPMFFSVKDSDTSMLEHKRKQKDEKTAMEEEMENLRKEQAEMEKVNXX 313
            ATAVEPQWLAE+GPMFFSVKDSDTS+LEHK++QK EKTAMEEEMENL+K QAE+EK    
Sbjct: 1180 ATAVEPQWLAELGPMFFSVKDSDTSLLEHKKRQKQEKTAMEEEMENLKKVQAEVEKERKQ 1239

Query: 312  XXXXXXXXXXXQISMPGFKKGSSTYLRPKKFGL 214
                       QISMPG +KGSST+LRPKKFGL
Sbjct: 1240 KEKEKMAKHQQQISMPGLRKGSSTFLRPKKFGL 1272


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Glycine max]
          Length = 1270

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/93 (72%), Positives = 75/93 (80%)
 Frame = -1

Query: 492  ATAVEPQWLAEMGPMFFSVKDSDTSMLEHKRKQKDEKTAMEEEMENLRKEQAEMEKVNXX 313
            ATAVEPQWLAE+GPMFFSVKDSDTS+LEHK++QK EKTAMEEEMENL+K QAE+EK    
Sbjct: 1178 ATAVEPQWLAELGPMFFSVKDSDTSLLEHKKRQKQEKTAMEEEMENLKKVQAEVEKERKH 1237

Query: 312  XXXXXXXXXXXQISMPGFKKGSSTYLRPKKFGL 214
                       QISMPG +KGSST+LRPKKFGL
Sbjct: 1238 KEKEKMAKHQQQISMPGLRKGSSTFLRPKKFGL 1270


>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1269

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -1

Query: 492  ATAVEPQWLAEMGPMFFSVKDSDTSMLEHKRKQKDEKTAMEEEMENLRKEQAEMEKVNXX 313
            AT+VEPQWLAE+GPMFFSVK+SDTSMLEHK++QK+EKTAMEEEMENLRKEQAE E+ +  
Sbjct: 1177 ATSVEPQWLAELGPMFFSVKESDTSMLEHKKRQKEEKTAMEEEMENLRKEQAEAERESKE 1236

Query: 312  XXXXXXXXXXXQISMPGFKKGSSTYLRPKKFGL 214
                       Q+S PG ++GSSTYLRPKKFGL
Sbjct: 1237 REKQKRAKQQQQVSTPGLRQGSSTYLRPKKFGL 1269


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