BLASTX nr result

ID: Papaver22_contig00003839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003839
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   140   1e-31
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   132   4e-29
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...   122   2e-26
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   117   7e-25
ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796...   117   7e-25

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  140 bits (353), Expect = 1e-31
 Identities = 85/152 (55%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
 Frame = -1

Query: 472 GSGGASTLI-DEDSPVQNSHNQLKSNQNGHHHQVPDFAYXXXXXXXXXXSDKYNSEPERK 296
           G   AS ++ D DSP QN    LKS  N HH QVPDFAY          SDK N E E K
Sbjct: 185 GETTASAIVADGDSPQQN---HLKSTSNVHH-QVPDFAYSPNPHNGSSGSDKNNVELEPK 240

Query: 295 GKTVXXXXXXXXXXXPTLYASSSAPIKQREQKVNLNDPKTLASATKRLQENYQEAQNAKK 116
            K V                +S A  KQREQK +L D + LASA +RL ENYQEAQNAKK
Sbjct: 241 RKAVPRRETPNKPNQTPPIPTSVALNKQREQKDSLVDEEKLASARRRLHENYQEAQNAKK 300

Query: 115 QRTIQVMNIHEIPKPKNSFFAKNKGGFQAKHW 20
           QRTIQVM+IH+IPKPKN+FFAKN+GG QAKHW
Sbjct: 301 QRTIQVMDIHDIPKPKNTFFAKNRGGVQAKHW 332


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score =  132 bits (331), Expect = 4e-29
 Identities = 79/155 (50%), Positives = 97/155 (62%), Gaps = 4/155 (2%)
 Frame = -1

Query: 472 GSGGASTLIDEDSPVQNSHNQLKSNQNGHHHQVPDFAYXXXXXXXXXXSDKYNSEPERKG 293
           G   A+ L D DSP Q      K+ QNG+H QVPDFAY          SD+ NSEPE KG
Sbjct: 198 GEQTATLLADGDSPQQ------KAPQNGYH-QVPDFAYSPNPHNGGSGSDRNNSEPEPKG 250

Query: 292 KTVXXXXXXXXXXXPTLYASSSAPIKQREQKVNLN-DPKTLASATKRLQENYQEAQNAKK 116
           K+V               +S +   +Q+EQ+   N D + LASA KRLQENY+EA+NAK+
Sbjct: 251 KSVPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKR 310

Query: 115 QRTIQVMNIHEIPKPKNSFFAKNK---GGFQAKHW 20
           QRTIQVM+IHEIPKPKN+FF+KNK   GG Q +HW
Sbjct: 311 QRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRHW 345


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  122 bits (307), Expect = 2e-26
 Identities = 80/151 (52%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
 Frame = -1

Query: 451 LIDEDSPVQNSHNQLKSNQNGHHHQVPDFAYXXXXXXXXXXSDKYNSEPERKGKTVXXXX 272
           + D DSP Q      K  QNGHH QVPDFAY          SDK NSEPER+ K V    
Sbjct: 219 MADGDSPRQ------KFPQNGHH-QVPDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRKE 271

Query: 271 XXXXXXXPTLYASSSAPI---KQREQKVNLN-DPKTLASATKRLQENYQEAQNAKKQRTI 104
                   ++  S+SA     +QREQ+   N D   LASA KRLQ NY+EA+NAKKQRTI
Sbjct: 272 APPRPAQQSVPVSASASHIVQRQREQQRENNFDSDRLASARKRLQANYKEAENAKKQRTI 331

Query: 103 QVMNIHEIPKP--KNSFFAKNK-GGFQAKHW 20
           QVM+IHE+PKP  KN+FFAKNK GG Q +HW
Sbjct: 332 QVMDIHELPKPKNKNTFFAKNKGGGSQGRHW 362


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score =  117 bits (294), Expect = 7e-25
 Identities = 74/151 (49%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
 Frame = -1

Query: 472 GSGGASTLIDEDSPVQNSHNQLKSNQNGHHHQVPDFAYXXXXXXXXXXSDKYNSEPERKG 293
           G   +S L++ DSP Q      K  + GHH QVPDF Y          SDK N+EPE K 
Sbjct: 190 GEFTSSALMEGDSPPQ------KIPRTGHH-QVPDFGYSPNPQNGSSGSDKNNAEPEPKV 242

Query: 292 KTVXXXXXXXXXXXPTLYASS-SAPIKQREQKVNLNDPKTLASATKRLQENYQEAQNAKK 116
           K +               +SS   P KQR+  +   DP   ASA KRL ENYQEAQNAKK
Sbjct: 243 KAIPRKEVPTRPAQSAPVSSSFPPPNKQRDTAI---DPDKFASARKRLHENYQEAQNAKK 299

Query: 115 QRTIQVMNIHEIPKPKNSFFAKNKGGFQAKH 23
           QRTIQVM+IH+IPKPKN+FFAK K G Q +H
Sbjct: 300 QRTIQVMDIHDIPKPKNTFFAKPKVGSQGRH 330


>ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796457 [Glycine max]
          Length = 314

 Score =  117 bits (294), Expect = 7e-25
 Identities = 69/152 (45%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
 Frame = -1

Query: 472 GSGGASTLIDEDSPVQNSHNQLKSNQNGHHHQVPDFAYXXXXXXXXXXSDKYNSEPERKG 293
           G  G + + DEDSP Q      +  QNGH  Q+PDFAY          S++ N E ERK 
Sbjct: 173 GEPGTAVMADEDSPQQ------RILQNGHR-QIPDFAYSPNPHYGSFGSERNNIEAERKP 225

Query: 292 KTVXXXXXXXXXXXPTLYASSSAPIKQREQKVNLNDPKTLASATKRLQENYQEAQNAKKQ 113
           K +                ++ AP  Q  Q+ +  DP   ASA KRLQENY++A NAKKQ
Sbjct: 226 KAIPRKEAPSKPSPSV---TTPAPPTQNRQRESNFDPDRFASARKRLQENYKDAANAKKQ 282

Query: 112 RTIQVMNIHEIPKPKNSFFAKNKGGF-QAKHW 20
           RTIQVM++HE+PKPKN+F  KNKGG  Q +HW
Sbjct: 283 RTIQVMDLHELPKPKNAFLGKNKGGTGQGRHW 314


Top