BLASTX nr result

ID: Papaver22_contig00003672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003672
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group] g...    79   5e-28
gb|ACN32036.1| unknown [Zea mays]                                      76   5e-27
gb|ACL54615.1| unknown [Zea mays]                                      74   2e-26
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                 77   2e-25
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...    72   4e-24

>ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group]
           gi|113531414|dbj|BAF03797.1| Os01g0123000 [Oryza sativa
           Japonica Group] gi|215741345|dbj|BAG97840.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 360

 Score = 79.3 bits (194), Expect(2) = 5e-28
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
 Frame = +1

Query: 10  LQGYDLEHYFTGENPCPPAVFNG-------------LPNPAFTTWVREDKIIIGWLFSSL 150
           L+G  LE + +G+   PPA                 + NPA   W   D+ ++G+LFSSL
Sbjct: 39  LRGARLEGFISGKTTPPPAEIEKKEGDKKEGEKTIKIANPAVDEWFATDQQVLGFLFSSL 98

Query: 151 SAPILAMVLVCTSCATSWTQIDELLASKSEANILAIRRELQNIQKGNRSVTEYLAHANQL 330
           S  IL+ V   T+ A +W  I ++ ASKS A ++ +R  L + QKG  SVTEY+A    +
Sbjct: 99  SREILSQVAGATTAAQAWQAISDMFASKSRAGLINMRLALTSTQKGTMSVTEYVAKMRAI 158

Query: 331 AYSLSSDG 354
           A  L++ G
Sbjct: 159 ADELAAAG 166



 Score = 72.0 bits (175), Expect(2) = 5e-28
 Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
 Frame = +2

Query: 392 LLDGLDSSFETIYASLQTYMDRFTVETFETHLLSYERRIDKQNKSLMQPQENVARSALKR 571
           +++GLD++F+ +  +L   ++  TV+   +HLL++E +I  +   L        R+ + R
Sbjct: 178 IINGLDANFDPVVEALVARVEPITVQEMYSHLLNFENKIRLRQAFLTASTNAANRNNVTR 237

Query: 572 G-------------------------NASNTGAISVVCQLCDKPHHSSQDCWKRFDCSFK 676
           G                         N    G     CQ+C+K  H + DCW RFD ++ 
Sbjct: 238 GGRGGMPRGRGGRGGGGRGGNGGRGNNGGGRGDNRPTCQVCNKRGHVASDCWHRFDETYV 297

Query: 677 PPRKQPPNRNSRPNSSQGSXXXXXXXXXXXXXXXDWLPNSGASHHMTYNISHLRTPTEYT 856
           P  K                              +W  ++GA+ H+T  +  L T  +Y 
Sbjct: 298 PDEK-----------------IGGAATHAYGIDTNWYVDTGATDHITSQLDKLTTKEKYQ 340

Query: 857 GTDQVNVASG 886
           GTDQ++ ASG
Sbjct: 341 GTDQIHTASG 350


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 75.9 bits (185), Expect(2) = 5e-27
 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
 Frame = +1

Query: 4   PYLQGYDLEHYFTGENPCP-------PAVFNG----LPNPAFTTWVREDKIIIGWLFSSL 150
           PYL+   L  +  G  P P       PA  +G      NP FT+W  +D++++  + SSL
Sbjct: 44  PYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSL 103

Query: 151 SAPILAMVLVCTSCATSWTQIDELLASKSEANILAIRRELQNIQKGNRSVTEYLAHANQL 330
           S  +LA V+  T+   +W+ ++ + AS S A I+ IR +L  IQKG+ +  EY     +L
Sbjct: 104 SEEVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRL 163

Query: 331 AYSLSSDG 354
           A +L++ G
Sbjct: 164 ADTLAAVG 171



 Score = 72.0 bits (175), Expect(2) = 5e-27
 Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 30/205 (14%)
 Frame = +2

Query: 365 ISDMEIRHILLDGLDSSFETIYASLQTYMDRFTVETFETHLLSYERR---------IDKQ 517
           + D E    LL GL + ++++  S+ T  D +T+     HLLS+E R         I   
Sbjct: 174 LEDEEFISYLLRGLPADYDSLVTSITTRPDTYTISDVYAHLLSFETRQEYHTAVGQISSV 233

Query: 518 NKSLMQPQENVA--------------RSALKRGN-------ASNTGAISVVCQLCDKPHH 634
           N +   P                   RS   RGN        SN  + S  CQ+C K +H
Sbjct: 234 NNANRVPSRGGGAFGQNGRGGRGRGGRSQPGRGNNRPPARPPSNNSSSSGTCQICGKGNH 293

Query: 635 SSQDCWKRFDCSFKPPRKQPPNRNSRPNSSQGSXXXXXXXXXXXXXXXDWLPNSGASHHM 814
           ++  CW RFD +++               ++ +               +W  +SGA+ H+
Sbjct: 294 NALQCWHRFDQAYQ---------------AESTVKQAAAATHEYAVDPNWYMDSGATDHI 338

Query: 815 TYNISHLRTPTEYTGTDQVNVASGS 889
           T ++  L T   YTG D++ VA+G+
Sbjct: 339 TSDLERLTTRERYTGGDKIQVANGA 363


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 74.3 bits (181), Expect(2) = 2e-26
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
 Frame = +1

Query: 4   PYLQGYDLEHYFTGENPCP-------PAVFNG----LPNPAFTTWVREDKIIIGWLFSSL 150
           PYL+   L  +  G  P P       PA  +G      NP FT+W  +D++++  + SSL
Sbjct: 44  PYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSL 103

Query: 151 SAPILAMVLVCTSCATSWTQIDELLASKSEANILAIRRELQNIQKGNRSVTEYLAHANQL 330
           S  +LA V+  T+   +W+ ++ + AS S   I+ IR +L  IQKG+ +  EY     +L
Sbjct: 104 SEEVLATVVDATTARGAWSTLERMYASSSRVRIMQIRMQLATIQKGDLTAAEYFRKVKRL 163

Query: 331 AYSLSSDG 354
           A +L++ G
Sbjct: 164 ADTLAAVG 171



 Score = 72.0 bits (175), Expect(2) = 2e-26
 Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 30/205 (14%)
 Frame = +2

Query: 365 ISDMEIRHILLDGLDSSFETIYASLQTYMDRFTVETFETHLLSYERR---------IDKQ 517
           + D E    LL GL + ++++  S+ T  D +T+     HLLS+E R         I   
Sbjct: 174 LEDEEFISYLLRGLPADYDSLVTSITTRPDTYTISDVYAHLLSFETRQEYHTAVGQISSV 233

Query: 518 NKSLMQPQENVA--------------RSALKRGN-------ASNTGAISVVCQLCDKPHH 634
           N +   P                   RS   RGN        SN  + S  CQ+C K +H
Sbjct: 234 NNANRVPSRGGGAFGQNGRGGRGRGGRSQPGRGNNRPPARPPSNNSSSSGTCQICGKGNH 293

Query: 635 SSQDCWKRFDCSFKPPRKQPPNRNSRPNSSQGSXXXXXXXXXXXXXXXDWLPNSGASHHM 814
           ++  CW RFD +++               ++ +               +W  +SGA+ H+
Sbjct: 294 NALQCWHRFDQAYQ---------------AESTVKQAAAATHEYAVDPNWYMDSGATDHI 338

Query: 815 TYNISHLRTPTEYTGTDQVNVASGS 889
           T ++  L T   YTG D++ VA+G+
Sbjct: 339 TSDLERLTTRERYTGGDKIQVANGA 363


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score = 76.6 bits (187), Expect(2) = 2e-25
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
 Frame = +1

Query: 10  LQGYDLEHYFTGENPCPPAVFNGL--------PNPAFTTWVREDKIIIGWLFSSLSAPIL 165
           ++G  LE +  G+NP PPA              NP +  W   D+ I+G+LFSSL+   L
Sbjct: 176 IRGARLEGHINGKNPAPPAEITKTVDGKEVKTSNPNYDEWFAADQQILGFLFSSLTRETL 235

Query: 166 AMVLVCTSCATSWTQIDELLASKSEANILAIRRELQNIQKGNRSVTEYLAHANQLAYSLS 345
             V    + A +W  +D++  S++ A  L +R  L  +QKGN S++EY+     LA  ++
Sbjct: 236 LQVAAVKTAAEAWKTLDDMFTSRTRARSLNVRLALTTLQKGNSSISEYIGKMKTLADEVA 295

Query: 346 SDG 354
           + G
Sbjct: 296 AAG 298



 Score = 65.9 bits (159), Expect(2) = 2e-25
 Identities = 50/212 (23%), Positives = 81/212 (38%), Gaps = 31/212 (14%)
 Frame = +2

Query: 365 ISDMEIRHILLDGLDSSFETIYASLQTYMDRFTVETFETHLLSYERRIDKQNKSLMQPQE 544
           + D E+   +L+GLD  F+++ +++   ++  TV    + LLS+E R+  +     Q   
Sbjct: 301 LDDEELIAYILNGLDEDFDSVVSTIVGRVEPVTVAEVYSQLLSFENRLAMRQA---QATA 357

Query: 545 NVARSALKRGNASNTGAISV-------------------------------VCQLCDKPH 631
           N+A    + G  S  G  +                                +CQ+C K  
Sbjct: 358 NMANRGGRGGGGSRGGGANPGRGRGATRGRGAAPGRGRGNNQQQRSYDNRPLCQVCYKRG 417

Query: 632 HSSQDCWKRFDCSFKPPRKQPPNRNSRPNSSQGSXXXXXXXXXXXXXXXDWLPNSGASHH 811
           H + DCW RFD  F P  K                              +W  ++GA+ H
Sbjct: 418 HVAADCWHRFDEDFVPDDK-----------------LVAAAIHTHARDSNWYVDTGATDH 460

Query: 812 MTYNISHLRTPTEYTGTDQVNVASGSSLPISH 907
           +T  +  L     Y G DQ++ ASGS + I H
Sbjct: 461 ITSELEKLTARDVYKGHDQIHTASGSGMEIKH 492


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|31433472|gb|AAP54977.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1031

 Score = 72.0 bits (175), Expect(2) = 4e-24
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
 Frame = +1

Query: 10  LQGYDLEHYFTGENPCPPAVFNG------------LPNPAFTTWVREDKIIIGWLFSSLS 153
           L+G  LE +       P A                +PNP + TW  +D+ ++G++FSSLS
Sbjct: 39  LRGAQLEEHIVSTTAAPAAEIEKEDGDKDKKTKIVIPNPEYKTWFVQDQQVLGFIFSSLS 98

Query: 154 APILAMVLVCTSCATSWTQIDELLASKSEANILAIRRELQNIQKGNRSVTEYLAHANQLA 333
             +L  V    + A +W  ID++ + KS+A  + +   L   QKG  S++EY+A    LA
Sbjct: 99  REVLQQVAGARTAAQAWNMIDDMFSCKSKAGTINVLLALTTTQKGPMSISEYIAKMRSLA 158

Query: 334 YSLSSDG 354
             +++ G
Sbjct: 159 DEMAATG 165



 Score = 66.2 bits (160), Expect(2) = 4e-24
 Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 32/213 (15%)
 Frame = +2

Query: 365 ISDMEIRHILLDGLDSSFETIYASLQTY--MDRFTVETFETHLLSYERRIDKQNKSLMQP 538
           + + E+   +++GLDS F+     L     +   ++    + LLSYE RI  +   L   
Sbjct: 168 LDEEELVAYIINGLDSEFDAAVEGLMATARIAPVSISHVYSQLLSYENRIRIRQAYLTTS 227

Query: 539 QENVARSALKRGNASNTGA------------------------------ISVVCQLCDKP 628
                R   + G  S+TG                                  VCQ+C K 
Sbjct: 228 ANAANRGGGRGGRGSSTGNRGGRRGGFGRGGRGRGAPSGASQGRGRGNDTRPVCQVCHKR 287

Query: 629 HHSSQDCWKRFDCSFKPPRKQPPNRNSRPNSSQGSXXXXXXXXXXXXXXXDWLPNSGASH 808
            H + DCW R+D S+ P  K                              +W  ++GA+ 
Sbjct: 288 GHVASDCWHRYDDSYVPDEK-----------------LGGAATYAYGVDTNWYVDTGATD 330

Query: 809 HMTYNISHLRTPTEYTGTDQVNVASGSSLPISH 907
           H+T  +  L T   Y GTDQ++ ASG  + I H
Sbjct: 331 HITGQLDKLTTKERYKGTDQIHTASGEGMSIKH 363


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