BLASTX nr result

ID: Papaver22_contig00003204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003204
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303836.1| predicted protein [Populus trichocarpa] gi|2...   155   6e-36
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|...   140   2e-31
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9...   137   1e-30
dbj|BAJ34529.1| unnamed protein product [Thellungiella halophila]     130   1e-28
ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arab...   130   2e-28

>ref|XP_002303836.1| predicted protein [Populus trichocarpa] gi|222841268|gb|EEE78815.1|
           predicted protein [Populus trichocarpa]
          Length = 1067

 Score =  155 bits (391), Expect = 6e-36
 Identities = 86/155 (55%), Positives = 104/155 (67%), Gaps = 4/155 (2%)
 Frame = +1

Query: 133 MASTSTISHTGISYELHKMKSKVS-RASCEGGFEMGSGLNISSQFKKRKVSANMDSHSSD 309
           MAS S +   G S E+  ++S +S   SCE  FE+ + LN   Q+KKR+ S   +    D
Sbjct: 1   MASPSLLPVAGSSNEIPSIRSNLSFGTSCELDFEVET-LNSEGQYKKRRTSLKSEPRCED 59

Query: 310 ---VEEFLPVLHSSDYFMEPSVEVLAEKESADPGYCSRVQNFTVGRFGYGFVKFLGETDV 480
              VE  LP L S DY+MEP +  LA  E  DPGYCSRV +FTVGRFGYG VKFLG+TDV
Sbjct: 60  FRMVEALLPTLRSVDYYMEPCLMDLAAGEVVDPGYCSRVLDFTVGRFGYGRVKFLGKTDV 119

Query: 481 RWLNLDQIVKFDRHNIVVYEDEMDKPEVGEALNKP 585
           R LNLDQIVKF+RH ++VYEDE  KP VG+ LNKP
Sbjct: 120 RRLNLDQIVKFNRHEVIVYEDENAKPMVGQGLNKP 154


>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
           gi|223533319|gb|EEF35071.1| nucleoporin, putative
           [Ricinus communis]
          Length = 1067

 Score =  140 bits (353), Expect = 2e-31
 Identities = 71/128 (55%), Positives = 92/128 (71%), Gaps = 4/128 (3%)
 Frame = +1

Query: 211 SCEGGFEMGSGLNISSQFKKRKVSANMDSHSSDV----EEFLPVLHSSDYFMEPSVEVLA 378
           SC+   E+G   ++ +Q+KKR++S N D  S ++    E  LP L S+DY+MEPS+  L 
Sbjct: 28  SCKSDCEVGV-FSLQTQYKKRRLSPNNDDVSCEISREIECSLPTLCSTDYYMEPSLTDLV 86

Query: 379 EKESADPGYCSRVQNFTVGRFGYGFVKFLGETDVRWLNLDQIVKFDRHNIVVYEDEMDKP 558
             E  DPGYCSRV +F VGR G+G VKFLG TD+RWL+LD+IVKF RH IVVYED+ DKP
Sbjct: 87  AHELIDPGYCSRVPDFIVGRLGFGCVKFLGTTDLRWLDLDKIVKFRRHEIVVYEDDSDKP 146

Query: 559 EVGEALNK 582
           +VG+ LNK
Sbjct: 147 QVGQGLNK 154


>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
           vinifera]
          Length = 1041

 Score =  137 bits (345), Expect = 1e-30
 Identities = 71/128 (55%), Positives = 93/128 (72%), Gaps = 5/128 (3%)
 Frame = +1

Query: 214 CEGGFEMGSGLNIS-SQFKKRKVS----ANMDSHSSDVEEFLPVLHSSDYFMEPSVEVLA 378
           C+ G    SG  I+  Q+K+RK+S    +++     +VE  LP L SS Y+MEP ++ LA
Sbjct: 5   CDAGT---SGSQIALHQYKRRKISQKNVSSLCEVHGEVEASLPTLRSSGYYMEPCLKELA 61

Query: 379 EKESADPGYCSRVQNFTVGRFGYGFVKFLGETDVRWLNLDQIVKFDRHNIVVYEDEMDKP 558
           ++E  D G+CSRVQ+FTVGRFGYG VKFLG+TDVRWL+LDQI++F RH +VVY DE  KP
Sbjct: 62  KRELMDSGFCSRVQDFTVGRFGYGRVKFLGDTDVRWLDLDQIIRFGRHEVVVYGDEGAKP 121

Query: 559 EVGEALNK 582
           EVG+ LNK
Sbjct: 122 EVGQGLNK 129


>dbj|BAJ34529.1| unnamed protein product [Thellungiella halophila]
          Length = 1042

 Score =  130 bits (328), Expect = 1e-28
 Identities = 63/116 (54%), Positives = 85/116 (73%), Gaps = 4/116 (3%)
 Frame = +1

Query: 247 NISSQFKKRKVSANMD----SHSSDVEEFLPVLHSSDYFMEPSVEVLAEKESADPGYCSR 414
           N+ S+ KKR++S + +     H  D+ + LP L+S DYF++PS+  L ++E  +P YCSR
Sbjct: 14  NLDSR-KKRRISLDANPVVCEHYKDIRDSLPTLNSPDYFLKPSMNELVQRELENPDYCSR 72

Query: 415 VQNFTVGRFGYGFVKFLGETDVRWLNLDQIVKFDRHNIVVYEDEMDKPEVGEALNK 582
           V +FTVGR GYG++KFLG TDVR L+LDQIVKF RH ++VY+DE  KP VGE LNK
Sbjct: 73  VPDFTVGRIGYGYIKFLGCTDVRKLDLDQIVKFQRHEVIVYDDESSKPVVGEGLNK 128


>ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arabidopsis lyrata subsp.
           lyrata] gi|297335120|gb|EFH65538.1| hypothetical protein
           ARALYDRAFT_895920 [Arabidopsis lyrata subsp. lyrata]
          Length = 1045

 Score =  130 bits (327), Expect = 2e-28
 Identities = 63/116 (54%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
 Frame = +1

Query: 247 NISSQFKKRKVS----ANMDSHSSDVEEFLPVLHSSDYFMEPSVEVLAEKESADPGYCSR 414
           N+ S+ KKR++S    A +  HS ++ + LP+L+S DYF++P +  L E+E  +P YCSR
Sbjct: 18  NLDSR-KKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCMNDLVEREIKNPDYCSR 76

Query: 415 VQNFTVGRFGYGFVKFLGETDVRWLNLDQIVKFDRHNIVVYEDEMDKPEVGEALNK 582
           V +FT+GR GYG++KFLG TDVR L+LDQIVKF RH ++VY+DE  KP VGE LNK
Sbjct: 77  VPDFTIGRIGYGYIKFLGNTDVRRLDLDQIVKFRRHEVIVYDDESSKPVVGEGLNK 132


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