BLASTX nr result
ID: Papaver22_contig00003161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00003161
(530 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300569.1| predicted protein [Populus trichocarpa] gi|2... 124 9e-27
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi... 112 3e-23
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 107 8e-22
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ... 105 4e-21
ref|XP_002518758.1| pentatricopeptide repeat-containing protein,... 105 4e-21
>ref|XP_002300569.1| predicted protein [Populus trichocarpa] gi|222847827|gb|EEE85374.1|
predicted protein [Populus trichocarpa]
Length = 568
Score = 124 bits (311), Expect = 9e-27
Identities = 57/93 (61%), Positives = 76/93 (81%), Gaps = 2/93 (2%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMR 189
D+ + A L+HMYS+FG V DARK+FD M RD+G+WNAMISG+CQNGNA EAL + +EMR
Sbjct: 28 DVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMR 87
Query: 190 MEGVQLDSTTVSSILPVCAPLGEELKG--IHVY 282
+EGV++D+ TV+S+LPVCA +G+ L G IH+Y
Sbjct: 88 LEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120
Score = 63.9 bits (154), Expect = 1e-08
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEM- 186
+L + LI+MY+KFG + A+KVF ++ ++D +WN +I+G+ QNG A EA+ V+ M
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 187 RMEGVQLDSTTVSSILPVCAPLGEELKGIHVYARFIKVC---QITVSCCLL 330
E + + T SILP + +G +G+ ++ + IK C + V CL+
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238
>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 112 bits (281), Expect = 3e-23
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 FCLDLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFE 180
F D+ + A LIHMYS+FGFV AR +FD M RD G+WNAMISG QNGNA +AL V +
Sbjct: 203 FQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 262
Query: 181 EMRMEGVQLDSTTVSSILPVCAPLGEELKG--IHVY 282
EMR+EG+ +DS TV+SILPVCA LG+ IH+Y
Sbjct: 263 EMRLEGINMDSVTVASILPVCAQLGDISTATLIHLY 298
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMR 189
+L + LI+MY+KFG + DA+KVF M++RD +WN++I+ + QN + V A G F +M+
Sbjct: 307 ELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQ 366
Query: 190 MEGVQLDSTTVSSILPVCA 246
+ G++ D T+ S+ + A
Sbjct: 367 LNGLEPDLLTLVSLASIAA 385
Score = 63.5 bits (153), Expect = 2e-08
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Frame = +1
Query: 31 LIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEM-RMEGVQL 207
++ MY+K G + A KVF+++ V+D +WN +ISG+ QNG A EA+ V+ M ++L
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475
Query: 208 DSTTVSSILPVCAPLGEELKGIHVYARFIKV---CQITVSCCLL 330
+ T SIL A +G +G+ ++ IK + V CL+
Sbjct: 476 NQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLI 519
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 107 bits (268), Expect = 8e-22
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 FCLDLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFE 180
F D+ I A IH YS+FGFVS A +FD M +RD GTWNAMISGF NG EAL VF+
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229
Query: 181 EMRMEGVQLDSTTVSSILPVCAPLGEELKG--IHVYA 285
EMR + V +DS T+SS+LP+C L + + G IHVYA
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYA 266
Score = 70.1 bits (170), Expect = 2e-10
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +1
Query: 1 FCLDLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFE 180
F D+++ +I MY+K GF+ ARKVF+ + V+D +WN++I+G+ QNG A EA+ V+
Sbjct: 373 FLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYS 432
Query: 181 EMR-MEGVQLDSTTVSSILPVCAPLGEELKGIHVYARFIK---VCQITVSCCLL 330
MR G + T SIL + LG +G+ + + IK I VS CL+
Sbjct: 433 SMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLV 486
Score = 66.2 bits (160), Expect = 3e-09
Identities = 37/98 (37%), Positives = 55/98 (56%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMR 189
DL + LI+MY+KFG + A +F+ M VRD +WN++++ F QN V ALGV+ +M
Sbjct: 274 DLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMH 333
Query: 190 MEGVQLDSTTVSSILPVCAPLGEELKGIHVYARFIKVC 303
GV D T+ S+ V A LG L ++ + C
Sbjct: 334 SIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRC 371
>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 105 bits (262), Expect = 4e-21
Identities = 49/96 (51%), Positives = 69/96 (71%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMR 189
D+ + A L+H+YS++G + A KVF M V+D G+WNAMISGFCQNGNA ALGV M+
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMK 214
Query: 190 MEGVQLDSTTVSSILPVCAPLGEELKGIHVYARFIK 297
EGV++D+ TV+SILPVCA + + G+ ++ +K
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK 250
Score = 64.7 bits (156), Expect = 8e-09
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMR 189
D+ + LI+MYSKFG + DA+ VFD M VRD +WN++I+ + QN + AL F+ M+
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Query: 190 MEGVQLDSTTVSSILPVCAPLGEE 261
+ G++ D TV S+ + + L ++
Sbjct: 316 LGGIRPDLLTVVSLTSIFSQLSDQ 339
Score = 58.5 bits (140), Expect = 6e-07
Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Frame = +1
Query: 10 DLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMR 189
D+ I L++MY+K G+++ A VFD + +D +WN +++G+ QNG A EA+ + M
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 190 --MEGVQLDSTTVSSILPVCAPLGEELKGIHVYARFIK---VCQITVSCCLL 330
+ + T V SI+P + +G +G+ ++A+ IK + V+ CL+
Sbjct: 418 ECRDTIPNQGTWV-SIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLI 468
>ref|XP_002518758.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542139|gb|EEF43683.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 379
Score = 105 bits (262), Expect = 4e-21
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +1
Query: 40 MYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMRMEGVQLDSTT 219
MY+KFG V +ARK+FD M +RD G+WNAMISG+CQNGN VE L + +EMR +GV +D+
Sbjct: 1 MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFA 60
Query: 220 VSSILPVCAPLGEELKGIHVYARFIKV 300
V+SILPVCA L + L G ++ IK+
Sbjct: 61 VASILPVCAKLNDVLSGKLIHLLVIKL 87
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +1
Query: 31 LIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFEEMRMEGVQLD 210
LI MY+KFG + A+KVFD M VRD +WN++I+ + QN +A A F++MR GV+ D
Sbjct: 99 LIAMYAKFGSLGLAQKVFDHMVVRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPD 158
Query: 211 STTVSSILPVCAPLGE 258
TV S+ + A L +
Sbjct: 159 LLTVLSLASIVAQLND 174
Score = 58.2 bits (139), Expect = 8e-07
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +1
Query: 1 FCLDLSIIAYLIHMYSKFGFVSDARKVFDVMWVRDKGTWNAMISGFCQNGNAVEALGVFE 180
F D I ++ MY+K G AR VF+ + V+D +WN +I+G+ QNG A EA+ V+
Sbjct: 191 FMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQNGLASEAIEVYN 250
Query: 181 EM-RMEGVQLDSTTVSSILPVCAPLGEELKGIHVYARFIK---VCQITVSCCLL 330
M + V T SILP + LG +G+ + IK + V CL+
Sbjct: 251 MMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVGTCLI 304