BLASTX nr result
ID: Papaver22_contig00003125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00003125
(2116 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 253 1e-64
emb|CBI17233.3| unnamed protein product [Vitis vinifera] 253 1e-64
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2... 252 3e-64
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [... 249 2e-63
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ... 247 8e-63
>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
vinifera]
Length = 1139
Score = 253 bits (646), Expect = 1e-64
Identities = 132/232 (56%), Positives = 162/232 (69%)
Frame = +2
Query: 2 LIKSLVKYFDPLKDITNDTQGPNIIITADKRRRLQFVECPDDINAMIDAAKYADLVLLLV 181
LIKSLVK++ K ++ +GP I I + K RRLQFVECP+DIN MIDAAK+ADL LLL+
Sbjct: 102 LIKSLVKHYT--KHNLSEVRGP-ITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLI 158
Query: 182 DANYGFEAETFEFLNLLQAHGLPKVTGVLTHLDQLKDDTKLNETEECLQDFFRTEIYQGA 361
D +YGFE ETFEFLN+LQ HG PKV GVLTHLD+ KD KL +T++ L+ F TEIY GA
Sbjct: 159 DGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGA 218
Query: 362 ITYSLSGLQDDLYNMEDVQVLAEEILTHQLHLSSRRMAQPYVLVDRFEDVTPPEKVLREA 541
+ LSGL Y ++ LA I + H S R + PY+LVDRFEDVTPPE+V
Sbjct: 219 KLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNN 278
Query: 542 NCGRNMSLYGYLRGCDINSGAKVHIAGLGDFHLAGVRSTTDPFPLSSETEKE 697
C RN++LYGYLRGC++ G KVHIAG+GD LAGV DP PL S +K+
Sbjct: 279 KCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKK 330
Score = 226 bits (575), Expect = 2e-56
Identities = 118/258 (45%), Positives = 163/258 (63%), Gaps = 18/258 (6%)
Frame = +2
Query: 698 NDFVELTHMDSESFRTGTYLRLEVHDIPFGLVANRHSGHPILVGGISFEEKDIGFMQARL 877
ND E T ++ E FRTGTYLRLEVHD+PF +V + HP+LVGGI E+++G+MQ R+
Sbjct: 723 NDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRI 782
Query: 878 KRHKWHMKLLKSAEPVTVSAGWRRYRTKPIYAREIDDPRHKFLEFIPEHEHCLAMFWGPL 1057
KRH+WH KLLK+ +P+ VS GWRRY+T P+YA E + RH+ L++ EH HCLAMFWGPL
Sbjct: 783 KRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPL 842
Query: 1058 VLPHTRVIVVH---GTKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTINERTALIK- 1225
P+T V+ V + FR+ A AVVL+ H +++K K G+ K I ++TALIK
Sbjct: 843 APPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCK-IFKKTALIKN 901
Query: 1226 FEPEEIDVAEFKGASIRTESGIWGKVNKVIK--------------RKGIATCEFEKEICG 1363
++++A F+GA+++T SGI G+V K K R+GIA C FE I
Sbjct: 902 MFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILM 961
Query: 1364 NDIFIMPVLCEAAAPCFF 1417
+D+ + E PCFF
Sbjct: 962 SDLVFLRAWTEVEVPCFF 979
>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 253 bits (646), Expect = 1e-64
Identities = 132/232 (56%), Positives = 162/232 (69%)
Frame = +2
Query: 2 LIKSLVKYFDPLKDITNDTQGPNIIITADKRRRLQFVECPDDINAMIDAAKYADLVLLLV 181
LIKSLVK++ K ++ +GP I I + K RRLQFVECP+DIN MIDAAK+ADL LLL+
Sbjct: 102 LIKSLVKHYT--KHNLSEVRGP-ITIVSGKNRRLQFVECPNDINGMIDAAKFADLALLLI 158
Query: 182 DANYGFEAETFEFLNLLQAHGLPKVTGVLTHLDQLKDDTKLNETEECLQDFFRTEIYQGA 361
D +YGFE ETFEFLN+LQ HG PKV GVLTHLD+ KD KL +T++ L+ F TEIY GA
Sbjct: 159 DGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGA 218
Query: 362 ITYSLSGLQDDLYNMEDVQVLAEEILTHQLHLSSRRMAQPYVLVDRFEDVTPPEKVLREA 541
+ LSGL Y ++ LA I + H S R + PY+LVDRFEDVTPPE+V
Sbjct: 219 KLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNN 278
Query: 542 NCGRNMSLYGYLRGCDINSGAKVHIAGLGDFHLAGVRSTTDPFPLSSETEKE 697
C RN++LYGYLRGC++ G KVHIAG+GD LAGV DP PL S +K+
Sbjct: 279 KCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKKK 330
Score = 226 bits (575), Expect = 2e-56
Identities = 118/258 (45%), Positives = 163/258 (63%), Gaps = 18/258 (6%)
Frame = +2
Query: 698 NDFVELTHMDSESFRTGTYLRLEVHDIPFGLVANRHSGHPILVGGISFEEKDIGFMQARL 877
ND E T ++ E FRTGTYLRLEVHD+PF +V + HP+LVGGI E+++G+MQ R+
Sbjct: 889 NDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRI 948
Query: 878 KRHKWHMKLLKSAEPVTVSAGWRRYRTKPIYAREIDDPRHKFLEFIPEHEHCLAMFWGPL 1057
KRH+WH KLLK+ +P+ VS GWRRY+T P+YA E + RH+ L++ EH HCLAMFWGPL
Sbjct: 949 KRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPL 1008
Query: 1058 VLPHTRVIVVH---GTKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTINERTALIK- 1225
P+T V+ V + FR+ A AVVL+ H +++K K G+ K I ++TALIK
Sbjct: 1009 APPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCK-IFKKTALIKN 1067
Query: 1226 FEPEEIDVAEFKGASIRTESGIWGKVNKVIK--------------RKGIATCEFEKEICG 1363
++++A F+GA+++T SGI G+V K K R+GIA C FE I
Sbjct: 1068 MFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILM 1127
Query: 1364 NDIFIMPVLCEAAAPCFF 1417
+D+ + E PCFF
Sbjct: 1128 SDLVFLRAWTEVEVPCFF 1145
>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
predicted protein [Populus trichocarpa]
Length = 1181
Score = 252 bits (643), Expect = 3e-64
Identities = 130/232 (56%), Positives = 164/232 (70%)
Frame = +2
Query: 2 LIKSLVKYFDPLKDITNDTQGPNIIITADKRRRLQFVECPDDINAMIDAAKYADLVLLLV 181
LIK LVK++ K + +GP I I + K+RR+QFVECP+DIN MIDAAK+ADL LLL+
Sbjct: 99 LIKCLVKHYT--KHNIQEVRGP-ITIVSGKKRRVQFVECPNDINGMIDAAKFADLALLLI 155
Query: 182 DANYGFEAETFEFLNLLQAHGLPKVTGVLTHLDQLKDDTKLNETEECLQDFFRTEIYQGA 361
D +YGFE ETFEFLN+LQ HG PK+ GVLTHLDQ KD KL +T++ L+ F TEIY GA
Sbjct: 156 DGSYGFEMETFEFLNILQVHGFPKIMGVLTHLDQFKDVKKLKKTKQRLKHRFWTEIYDGA 215
Query: 362 ITYSLSGLQDDLYNMEDVQVLAEEILTHQLHLSSRRMAQPYVLVDRFEDVTPPEKVLREA 541
+ LSGL Y ++ LA I + H S R + PYVL DRFEDVTPPE+V +
Sbjct: 216 KLFYLSGLIHGKYVKREIHNLARFISVMKFHPLSWRTSHPYVLADRFEDVTPPERVRVDN 275
Query: 542 NCGRNMSLYGYLRGCDINSGAKVHIAGLGDFHLAGVRSTTDPFPLSSETEKE 697
C RN++LYGYLRGC++ G KVHIAG+GD++LAGV + DP PL S +K+
Sbjct: 276 KCDRNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSAAKKK 327
Score = 225 bits (573), Expect = 4e-56
Identities = 141/397 (35%), Positives = 202/397 (50%), Gaps = 69/397 (17%)
Frame = +2
Query: 698 NDFVELTHMDSESFRTGTYLRLEVHDIPFGLVANRHSGHPILVGGISFEEKDIGFMQARL 877
ND E T ++ E F+TGTYLRLE+HD+PF +V + PILVGGI E+ +G+MQARL
Sbjct: 764 NDLDEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARL 823
Query: 878 KRHKWHMKLLKSAEPVTVSAGWRRYRTKPIYAREIDDPRHKFLEFIPEHEHCLAMFWGPL 1057
KRH+WH K+LK+ +PV S GWRRY+T P+YA E + RH+ L++ PEH HCLA FWGPL
Sbjct: 824 KRHRWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPL 883
Query: 1058 VLPHTRVIVVH---GTKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHKTINERTALIKF 1228
P+T V+ V + FR+ A AVVL+ H K++K K G K + ++
Sbjct: 884 APPNTGVVAVQNLANNQASFRITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNM 943
Query: 1229 EPEEIDVAEFKGASIRTESGIWGKVNKVIK--------------RKGIATCEFEKEICGN 1366
+++VA F+GA++RT SGI G+V K K R+GIA C FE I +
Sbjct: 944 FTSDLEVARFEGAAVRTVSGIRGQVKKAAKDEIGNQPTKKGGAPREGIARCTFEDRILMS 1003
Query: 1367 DIFIMPVLCEAAAPCFF-----------------------KRRYS-TVHVNKDSL----- 1459
DI + + APCF+ +R ++ + VNKDSL
Sbjct: 1004 DIVFLRAWTQVEAPCFYNPLTTALQPRNKTWQGMKTVAELRREHNLPIPVNKDSLYRPIE 1063
Query: 1460 -----------------------KKEDPAQRRFELEQRRRVDITDEEPSSYPYSTDFTLI 1570
K +D + R LE+RR V + +E + LI
Sbjct: 1064 RTPKKFNPLVIPKSLQATLPFESKPKDIPKGRATLERRRAVVMEPDERKVHALVQQLRLI 1123
Query: 1571 LNIEYLCHKGKKTVVIMSEEKRKELVKNKQREEESTK 1681
N + K KK +++R +L K ++EE ++
Sbjct: 1124 TNDKMRKRKLKK------DQERNKLEAEKAKDEELSR 1154
>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
bms1, putative [Ricinus communis]
Length = 825
Score = 249 bits (637), Expect = 2e-63
Identities = 138/278 (49%), Positives = 178/278 (64%), Gaps = 8/278 (2%)
Frame = +2
Query: 2 LIKSLVKYFDPLKDITNDTQGPNIIITADKRRRLQFVECPDDINAMIDAAKYADLVLLLV 181
LIKSLVK++ K + +GP I I + K+RR+QFVECP+DIN MIDAAK+ADL LLL+
Sbjct: 102 LIKSLVKHYT--KHNLPEVRGP-ITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLI 158
Query: 182 DANYGFEAETFEFLNLLQAHGLPKVTGVLTHLDQLKDDTKLNETEECLQDFFRTEIYQGA 361
D +YGFE ETFEFLN+LQ HG PKV GVLTHLD+ KD KL +T++ L+ F TEIY GA
Sbjct: 159 DGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGA 218
Query: 362 ITYSLSGLQDDLYNMEDVQVLAEEILTHQLHLSSRRMAQPYVLVDRFEDVTPPEKVLREA 541
+ LSGL Y ++ LA I + H S R + PYVLVDRFEDVTPPE+V
Sbjct: 219 KLFYLSGLIHGKYPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNR 278
Query: 542 NCGRNMSLYGYLRGCDINSGAKVHIAGLGDFHLAGVRSTTDPFPLSSETEKE--NDFVEL 715
RN++LYGYLRGC++ G KVHIAG+GD+ LAGV + DP PL S +K+ D +L
Sbjct: 279 KSDRNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKKKGLRDKEKL 338
Query: 716 THMDSESF------RTGTYLRLEVHDIPFGLVANRHSG 811
+ + Y+ + H + F V + + G
Sbjct: 339 FYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDENGG 376
Score = 129 bits (324), Expect = 3e-27
Identities = 56/94 (59%), Positives = 75/94 (79%)
Frame = +2
Query: 698 NDFVELTHMDSESFRTGTYLRLEVHDIPFGLVANRHSGHPILVGGISFEEKDIGFMQARL 877
ND E+T ++ E F+TGTY+RLEVHD+PF +V + HPILVGGI F E+++G+MQARL
Sbjct: 723 NDLDEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPILVGGIGFGEENVGYMQARL 782
Query: 878 KRHKWHMKLLKSAEPVTVSAGWRRYRTKPIYARE 979
KRH+WH K+LK+ +P+ VS GWRRY+T P+YA E
Sbjct: 783 KRHRWHRKVLKTRDPIIVSIGWRRYQTTPVYAIE 816
>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1181
Score = 247 bits (631), Expect = 8e-63
Identities = 130/232 (56%), Positives = 162/232 (69%)
Frame = +2
Query: 2 LIKSLVKYFDPLKDITNDTQGPNIIITADKRRRLQFVECPDDINAMIDAAKYADLVLLLV 181
LIKSLVK++ K D +GP I I + K+RR+QFVECP+DIN MIDAAK+ADL LLL+
Sbjct: 104 LIKSLVKHYT--KHNLPDVRGP-ITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLI 160
Query: 182 DANYGFEAETFEFLNLLQAHGLPKVTGVLTHLDQLKDDTKLNETEECLQDFFRTEIYQGA 361
D +YGFE ETFEFLN+LQ HG PKV GVLTHLD+ KD KL +T++ L+ F TEIY GA
Sbjct: 161 DGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGA 220
Query: 362 ITYSLSGLQDDLYNMEDVQVLAEEILTHQLHLSSRRMAQPYVLVDRFEDVTPPEKVLREA 541
+ LSGL Y +V LA I + H S R + YV+VDRFED+TPPEKV
Sbjct: 221 KLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHSYVMVDRFEDITPPEKVHANN 280
Query: 542 NCGRNMSLYGYLRGCDINSGAKVHIAGLGDFHLAGVRSTTDPFPLSSETEKE 697
C R ++LYGYLRGC++ G KVHIAG+GD+ LAG+ + DP PL S +K+
Sbjct: 281 KCDRKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKKK 332
Score = 223 bits (568), Expect = 2e-55
Identities = 141/389 (36%), Positives = 205/389 (52%), Gaps = 18/389 (4%)
Frame = +2
Query: 305 NETEECLQDFFRTEIYQGAITYSLSGLQDDLYNMEDVQVLAEEILTHQLHLSSRRMAQPY 484
N+ EE F + + A+ +L + N +DV E++ T + H + R A
Sbjct: 656 NDNEEIRNRFVSGNVAKAALRNALPAANTEEDN-DDVYADFEDLETGEKHENHRTDAAFA 714
Query: 485 VLVDRFEDVTPPEKVLREANCGRNMSLYGYLRGCDINSGAKVHIAGLGDFHLAGVRSTTD 664
+ +D+ E+ L+ N S Y +I +++IA L
Sbjct: 715 ATTHKGDDLEAEERRLKNHRGQANESSYFDKLKEEIELQKQMNIAEL------------- 761
Query: 665 PFPLSSETEKENDFVELTHMDSESFRTGTYLRLEVHDIPFGLVANRHSGHPILVGGISFE 844
ND E T ++ E F+TGTYLRLE+ D+P +V HPILVGGI
Sbjct: 762 -----------NDLDEATRLEIEGFQTGTYLRLEIRDVPCEMVEYFDPYHPILVGGIGIG 810
Query: 845 EKDIGFMQARLKRHKWHMKLLKSAEPVTVSAGWRRYRTKPIYAREIDDPRHKFLEFIPEH 1024
E+++G+MQARLKRH+WH K+LK+ +P+ VS GWRRY+T PIYA E + RH+ L++ PEH
Sbjct: 811 EENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEH 870
Query: 1025 EHCLAMFWGPLVLPHTRVIVVH---GTKEVFRVAAKAVVLDPKHHLKIMKHSKWEGKFHK 1195
HCLAMFWGPL P+T V+ + + FR+ A AVVL+ H +I+K K G +
Sbjct: 871 MHCLAMFWGPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVG-YPC 929
Query: 1196 TINERTALIK-FEPEEIDVAEFKGASIRTESGIWGKVNKVIK--------------RKGI 1330
I ++TALIK +++VA F+GA+IRT SGI G+V K K ++GI
Sbjct: 930 KIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGI 989
Query: 1331 ATCEFEKEICGNDIFIMPVLCEAAAPCFF 1417
A C FE +I +DI + + P F+
Sbjct: 990 ARCTFEDKILMSDIVFLRAWTQVEVPQFY 1018