BLASTX nr result

ID: Papaver22_contig00003055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003055
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    83   2e-14
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    80   2e-13
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    80   2e-13
ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    76   3e-12
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 20/186 (10%)
 Frame = -3

Query: 517 LVGSCNGLVCAFQHHHLVIDPIYICNPLTREYVHLPQLVVNKEDVDPDRIEEGEVDMYNE 338
           +VGSCNGL+C      L  D +YI NP T  Y  LP+ +       PD+          E
Sbjct: 123 VVGSCNGLLCLSDS--LFNDSLYIYNPFTGRYKELPKSLQY-----PDQ----------E 165

Query: 337 TVCGFGYVRSTNEYKVVRIHY-------------LDYVEGNVEVYTIGNGFGWRAIGKVP 197
            V GFG+   TNEYKV+RI Y             + Y    V++ T+G   GWR++GKV 
Sbjct: 166 VVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCP-GWRSLGKVS 224

Query: 196 YQLETIGGGRGTYANDAIYWIS-------GNNIVAFDLAKEEFRLLMSPPCMQNLRHNCI 38
           Y+L  +     T  N  ++W+S          +V+FDL  E+FR +  P C     + C 
Sbjct: 225 YRL--VRRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDC--GGLNRCD 280

Query: 37  YGLVAL 20
           Y L  L
Sbjct: 281 YHLAVL 286


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
 Frame = -3

Query: 517 LVGSCNGLVCAFQHHHLVIDPIYICNPLTREYVHLPQLVVNKEDVDPDRIEEGEVDMYNE 338
           +VGSCNGL+C      L  D +YI NP T  Y  LP+ +       PD+          E
Sbjct: 124 VVGSCNGLLCLSDS--LYNDSLYIYNPFTGCYKELPKSLQY-----PDQ----------E 166

Query: 337 TVCGFGYVRSTNEYKVVRIHY-------------LDYVEGNVEVYTIGNGFGWRAIGKVP 197
            V GFG+   T EYKV+RI Y             + Y    V++ T+G    WR++GKV 
Sbjct: 167 VVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCP-EWRSLGKVS 225

Query: 196 YQLETIGGGRGTYANDAIYWIS-------GNNIVAFDLAKEEFRLLMSPPCMQNLRHNCI 38
           Y+L  +    G   N  ++WIS          +V+FDL  E+FR +  P C     + C 
Sbjct: 226 YRL--VRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDC--GGLNRCN 281

Query: 37  YGLVAL 20
           Y LV L
Sbjct: 282 YHLVVL 287


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
 Frame = -3

Query: 517 LVGSCNGLVCAFQHHHLVIDPIYICNPLTREYVHLPQLVVNKEDVDPDRIEEGEVDMYNE 338
           +VGSCNGL+C      L  D +Y+ NP TR++  LP+ +       PD+          E
Sbjct: 124 VVGSCNGLLCLADS--LFKDAVYVHNPFTRDFKQLPKSLQY-----PDQ----------E 166

Query: 337 TVCGFGYVRSTNEYKVVRIHY-------------LDYVEGNVEVYTIGNGFGWRAIGKVP 197
            V GFGY   T  YKVV++ Y             +   +  V+V T+G+   WR++GKV 
Sbjct: 167 VVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSP-TWRSLGKVS 225

Query: 196 YQLETIGGGRGTYANDAIYWISGNN------IVAFDLAKEEFRLLMSPPCMQNLRHNCIY 35
           YQL+          N  ++W++         IV+FDLA E+FR +  P C    R  C Y
Sbjct: 226 YQLDR--WPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSR--CNY 281

Query: 34  GLVALGSHL 8
            L+ LG  L
Sbjct: 282 HLLVLGGCL 290


>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
            gi|355513504|gb|AES95127.1| F-box family protein
            [Medicago truncatula]
          Length = 1154

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 63/183 (34%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
 Frame = -3

Query: 517  LVGSCNGLVCAF--QHHHLVIDPIYICNPLTREYVHLPQLVVNKEDVDPDRIEEGEVDMY 344
            +  SCNGL+C       H    P+ ICNP+T E++ LP+  +N  D      E   ++M 
Sbjct: 854  VANSCNGLLCLCCPSDEH----PLSICNPVTGEFIKLPEATINTHD------ERSPLNMR 903

Query: 343  NETVCGFGYVRSTNEYKVVRIHYLDYVEGN--------VEVYTIGNGFGWRAIGKVPYQL 188
             +   GFG+   TNEYKV+RI   D   GN        +E+YT+G    WR   +V  Q+
Sbjct: 904  GQV--GFGFQPKTNEYKVIRIWGSDVKRGNRWVFDRMVLEIYTLGTP-SWRN-AEVDPQI 959

Query: 187  ETIGGG----RGTYANDAIYWI----SGNNIVAFDLAKEEFRLLMSPPCMQN----LRHN 44
             +IG        T  N  I+WI       +I+ F L  E  +   SPP +QN     RHN
Sbjct: 960  -SIGSNIWLRYPTCVNGTIHWIRFKGQERSILCFCLENERLQSFPSPPVLQNQNNGFRHN 1018

Query: 43   -CI 38
             CI
Sbjct: 1019 ECI 1021



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
 Frame = -3

Query: 517 LVGSCNGLVCAFQHHHLVIDPIYICNPLTREYVHLPQLVVNKEDVDPDRIEEGEVDMYNE 338
           +V SCNGL+C    H     P+ ICNP+T E++ LP+   N        I    VD  + 
Sbjct: 167 VVNSCNGLLCL--RHPFEGRPLVICNPVTGEFIRLPKATAN-------LIHNDIVDKVS- 216

Query: 337 TVCGFGYVRSTNEYKVVRIHYLDYVEGN--------VEVYTIGNGFGWRAIGKVPYQLET 182
            +  FG+   TNEYKV+ I       GN        +E+ T+G    WR   +V  Q+ +
Sbjct: 217 GIAAFGFQPKTNEYKVMYIWDKYVRRGNGWVFDHIVLEINTLGTP-SWRN-AEVDPQI-S 273

Query: 181 IGGGRG----TYANDAIYWI----SGNNIVAFDLAKEEFRLLMSPPCMQN 56
           IG G      TY N A++WI       +I+ F    E  +   SPP  QN
Sbjct: 274 IGSGLSLHYPTYVNGALHWIRFEDEERSILCFCFESERLQSFPSPPVFQN 323


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
 Frame = -3

Query: 517 LVGSCNGLVCAFQHHHLVIDP-IYICNPLTREYVHLPQLVVNKEDVDPDRIEEGEVDMYN 341
           ++ SCNGL+C ++      D  +++CNP+  EY+ +P  VVN              D   
Sbjct: 136 ILNSCNGLLCLYEDSGDKSDMMVHVCNPVLGEYIDIP--VVN-------------TDKKF 180

Query: 340 ETVCGFGYVRSTNEYKVVRIHY----LDYVEGNVEVYTIGNGFGWRAIGKVPYQLETIGG 173
           E    FG+   +N+YKV++  Y    L       E+YT+G G  WR+IG   ++L+++  
Sbjct: 181 EHHLAFGFSSVSNQYKVLQTFYPEKDLTAAPCLAEIYTVGTG-QWRSIGNASFRLQSLDA 239

Query: 172 GRGTYANDAIYWISGNN-----IVAFDLAKEEFRLLMSPPCMQ 59
               + +D+I+WI   +     + AFD   E+F+L+  PP  Q
Sbjct: 240 --NAFLHDSIHWIEYRSNSIGFVSAFDFVSEQFKLVALPPASQ 280


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