BLASTX nr result
ID: Papaver22_contig00003053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00003053
(1518 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2... 202 2e-49
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2... 202 2e-49
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3... 201 4e-49
ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putati... 200 7e-49
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3... 199 2e-48
>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 202 bits (513), Expect = 2e-49
Identities = 93/130 (71%), Positives = 116/130 (89%), Gaps = 3/130 (2%)
Frame = -1
Query: 828 HLLNPGDYALGYDLYGANSNDIEIDKYKGLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 649
H+L PGDYALGYDL+GANSND+E+DKYK LVIP+AIL+KKSYEEKR +KRGKPR+WKLKS
Sbjct: 366 HILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKS 425
Query: 648 MNMEVDNSNRKLDEEKMNTEYEEFLKDLEENPEMTFNISLYRNKEYQPSE---MTDADDD 478
+NMEVD++ + D+EKMN+EYE+FL+DLEENPE+ FN+SLYRNKEYQPSE MTD +D
Sbjct: 426 LNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDI 485
Query: 477 GPLPLDQMLA 448
+PL+++LA
Sbjct: 486 PSIPLEELLA 495
Score = 196 bits (497), Expect = 2e-47
Identities = 104/183 (56%), Positives = 119/183 (65%)
Frame = -3
Query: 1516 RRTFFYLEQLILKHDAALRAIKIKQMDHGIDFFFGNRSHALKFVDFVGKVCPIKSRNDKQ 1337
RRTFFYLEQLILKHDAA RAIKIKQMDHGIDFFF NRSH +KFVDFVGKV P+KSRNDKQ
Sbjct: 169 RRTFFYLEQLILKHDAAARAIKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQ 228
Query: 1336 LVSHDEKSSTYNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1157
LVSHD KS+ YNY
Sbjct: 229 LVSHDTKSNNYNY---------------KHTFSVEISPICREDLVCLPPRVAVSLGNLGP 273
Query: 1156 XXLCTKVSDSIALLDPLTLRMSYMVADQYWRIPFKTLLSSRQLVEYIVLDVESMISEVNV 977
+C+KV++SIALLDP TLR ++ ADQYWR PFK+LL+SRQLVEYIV DV+ + EVN+
Sbjct: 274 LVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSLLTSRQLVEYIVFDVDFVSPEVNI 333
Query: 976 GGT 968
GG+
Sbjct: 334 GGS 336
>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 202 bits (513), Expect = 2e-49
Identities = 93/130 (71%), Positives = 116/130 (89%), Gaps = 3/130 (2%)
Frame = -1
Query: 828 HLLNPGDYALGYDLYGANSNDIEIDKYKGLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 649
H+L PGDYALGYDL+GANSND+E+DKYK LVIP+AIL+KKSYEEKR +KRGKPR+WKLKS
Sbjct: 366 HILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKS 425
Query: 648 MNMEVDNSNRKLDEEKMNTEYEEFLKDLEENPEMTFNISLYRNKEYQPSE---MTDADDD 478
+NMEVD++ + D+EKMN+EYE+FL+DLEENPE+ FN+SLYRNKEYQPSE MTD +D
Sbjct: 426 LNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDI 485
Query: 477 GPLPLDQMLA 448
+PL+++LA
Sbjct: 486 PSIPLEELLA 495
Score = 196 bits (497), Expect = 2e-47
Identities = 104/183 (56%), Positives = 119/183 (65%)
Frame = -3
Query: 1516 RRTFFYLEQLILKHDAALRAIKIKQMDHGIDFFFGNRSHALKFVDFVGKVCPIKSRNDKQ 1337
RRTFFYLEQLILKHDAA RAIKIKQMDHGIDFFF NRSH +KFVDFVGKV P+KSRNDKQ
Sbjct: 169 RRTFFYLEQLILKHDAAARAIKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQ 228
Query: 1336 LVSHDEKSSTYNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1157
LVSHD KS+ YNY
Sbjct: 229 LVSHDTKSNNYNY---------------KHTFSVEISPICREDLVCLPPRVAVSLGNLGP 273
Query: 1156 XXLCTKVSDSIALLDPLTLRMSYMVADQYWRIPFKTLLSSRQLVEYIVLDVESMISEVNV 977
+C+KV++SIALLDP TLR ++ ADQYWR PFK+LL+SRQLVEYIV DV+ + EVN+
Sbjct: 274 LVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSLLTSRQLVEYIVFDVDFVSPEVNI 333
Query: 976 GGT 968
GG+
Sbjct: 334 GGS 336
>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 201 bits (511), Expect = 4e-49
Identities = 91/127 (71%), Positives = 116/127 (91%)
Frame = -1
Query: 828 HLLNPGDYALGYDLYGANSNDIEIDKYKGLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 649
H+LNPGDYALGYDLYGANSND+E++KYKGL +P+AILIKKSYEEKR +KRGKPR+WKLKS
Sbjct: 365 HILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKS 424
Query: 648 MNMEVDNSNRKLDEEKMNTEYEEFLKDLEENPEMTFNISLYRNKEYQPSEMTDADDDGPL 469
++M+VD+ K+DE KMN+EYE+FL+DLEENP++ FNISLYRN+EYQPSE+TD +D +
Sbjct: 425 LSMDVDDKT-KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSV 483
Query: 468 PLDQMLA 448
PL+++LA
Sbjct: 484 PLEELLA 490
Score = 174 bits (442), Expect = 4e-41
Identities = 93/183 (50%), Positives = 117/183 (63%)
Frame = -3
Query: 1516 RRTFFYLEQLILKHDAALRAIKIKQMDHGIDFFFGNRSHALKFVDFVGKVCPIKSRNDKQ 1337
RRTFF+LEQLILKH AA AI+IKQMD GIDFFF NRSH +KFV+FVGKV PI+SR+DKQ
Sbjct: 168 RRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQ 227
Query: 1336 LVSHDEKSSTYNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1157
LVSHD KS+ +N+
Sbjct: 228 LVSHDPKSNIHNH---------------KHTFSVEISPICREDLICLPPKVAVSLGNLGP 272
Query: 1156 XXLCTKVSDSIALLDPLTLRMSYMVADQYWRIPFKTLLSSRQLVEYIVLDVESMISEVNV 977
+CTKV+++IALLDP TLR ++ ADQYWR F++LL+SRQLVEY+VLD+E++ +EVNV
Sbjct: 273 LVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNV 332
Query: 976 GGT 968
G+
Sbjct: 333 AGS 335
>ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223526598|gb|EEF28848.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 511
Score = 200 bits (509), Expect = 7e-49
Identities = 95/130 (73%), Positives = 114/130 (87%), Gaps = 3/130 (2%)
Frame = -1
Query: 828 HLLNPGDYALGYDLYGANSNDIEIDKYKGLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 649
H+L PGD ALGYDLYGANSNDIE+DKYKGLV+P+AILIKKSYEEKR +KRGKPRAWKLKS
Sbjct: 366 HILKPGDQALGYDLYGANSNDIELDKYKGLVLPEAILIKKSYEEKRQRKRGKPRAWKLKS 425
Query: 648 MNMEVDNSNRKLDEEKMNTEYEEFLKDLEENPEMTFNISLYRNKEYQPSEM---TDADDD 478
+ MEVD+S + D+EKM+TEYE+FL+DLEEN E+ FN+SLYRNKEYQPSEM TD +D
Sbjct: 426 LEMEVDDSRGRNDQEKMDTEYEQFLRDLEENAELRFNVSLYRNKEYQPSEMASVTDGEDV 485
Query: 477 GPLPLDQMLA 448
+PL+++LA
Sbjct: 486 PSIPLEELLA 495
Score = 188 bits (477), Expect = 4e-45
Identities = 101/183 (55%), Positives = 118/183 (64%)
Frame = -3
Query: 1516 RRTFFYLEQLILKHDAALRAIKIKQMDHGIDFFFGNRSHALKFVDFVGKVCPIKSRNDKQ 1337
RRTFFYLEQLILKHDAA RAIKIKQMD GIDFFFGNRSH +KFV+F+GKV P++SR+DKQ
Sbjct: 169 RRTFFYLEQLILKHDAAARAIKIKQMDQGIDFFFGNRSHGVKFVEFLGKVAPVRSRHDKQ 228
Query: 1336 LVSHDEKSSTYNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1157
LVSHD KS+ YNY
Sbjct: 229 LVSHDPKSNNYNY---------------KYTFSVEISPICREDLVCLPPKVAVSLGNLGP 273
Query: 1156 XXLCTKVSDSIALLDPLTLRMSYMVADQYWRIPFKTLLSSRQLVEYIVLDVESMISEVNV 977
+CTKV++SIALLDPLTLR Y+ DQYWR FK+LL+SRQLVEYIVLDV+ + EVN+
Sbjct: 274 LVICTKVTNSIALLDPLTLRHCYLDGDQYWRSSFKSLLTSRQLVEYIVLDVDIISPEVNI 333
Query: 976 GGT 968
G +
Sbjct: 334 GSS 336
>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 199 bits (506), Expect = 2e-48
Identities = 90/127 (70%), Positives = 115/127 (90%)
Frame = -1
Query: 828 HLLNPGDYALGYDLYGANSNDIEIDKYKGLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 649
H+LNPGDYALGYDLYGANSND+E++KYKGL +P+AILIKKSYEEKR +K GKPR+WKLKS
Sbjct: 365 HILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSWKLKS 424
Query: 648 MNMEVDNSNRKLDEEKMNTEYEEFLKDLEENPEMTFNISLYRNKEYQPSEMTDADDDGPL 469
++M+VD+ K+DE KMN+EYE+FL+DLEENP++ FNISLYRN+EYQPSE+TD +D +
Sbjct: 425 LSMDVDDKT-KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSV 483
Query: 468 PLDQMLA 448
PL+++LA
Sbjct: 484 PLEELLA 490
Score = 174 bits (442), Expect = 4e-41
Identities = 93/183 (50%), Positives = 117/183 (63%)
Frame = -3
Query: 1516 RRTFFYLEQLILKHDAALRAIKIKQMDHGIDFFFGNRSHALKFVDFVGKVCPIKSRNDKQ 1337
RRTFF+LEQLILKH AA AI+IKQMD GIDFFF NRSH +KFV+FVGKV PI+SR+DKQ
Sbjct: 168 RRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQ 227
Query: 1336 LVSHDEKSSTYNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1157
LVSHD KS+ +N+
Sbjct: 228 LVSHDPKSNIHNH---------------KHTFSVEISPICREDLICLPPKVAVSLGNLGP 272
Query: 1156 XXLCTKVSDSIALLDPLTLRMSYMVADQYWRIPFKTLLSSRQLVEYIVLDVESMISEVNV 977
+CTKV+++IALLDP TLR ++ ADQYWR F++LL+SRQLVEY+VLD+E++ +EVNV
Sbjct: 273 LVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNV 332
Query: 976 GGT 968
G+
Sbjct: 333 AGS 335