BLASTX nr result

ID: Papaver22_contig00003036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003036
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_201057.1| F-box family protein [Arabidopsis thaliana] gi|...    77   9e-12
ref|NP_201072.1| putative F-box protein [Arabidopsis thaliana] g...    75   3e-11
ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11
emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]    72   3e-10
ref|XP_002864811.1| hypothetical protein ARALYDRAFT_358470 [Arab...    71   5e-10

>ref|NP_201057.1| F-box family protein [Arabidopsis thaliana]
            gi|75262555|sp|Q9FJJ4.1|FB298_ARATH RecName: Full=F-box
            protein At5g62510 gi|10178082|dbj|BAB11501.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|332010233|gb|AED97616.1| F-box family protein
            [Arabidopsis thaliana]
          Length = 420

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 9/399 (2%)
 Frame = -3

Query: 1257 SLMRFKCVCKRLKSVIEN---DSKFIGLNLTHRKHHPSVCMVLLEALKPDAEDVGWLPVN 1087
            SLMRFKCV K+  S+I +    ++++ +    R H   + +V     K D+ +V   P  
Sbjct: 60   SLMRFKCVSKQWSSLIRSRFFSNRYLTVASPLRPHRLYISLV---DHKCDSREVCHSPRE 116

Query: 1086 HCQMYLLTANLYEGGGKLSETTTVGSVAKLNRSSVPKLDLKPINGLICLFNTASKEKIDF 907
               +   + + ++      + TT+  +  L+  ++  L L  + G  CL+N  +++ +  
Sbjct: 117  SVLLSFSSPSSFD-----QDLTTMQGMGGLHMVTLRGLILYIVCGKACLYNPTTRQSVTL 171

Query: 906  SFRIYNIGTRESTSWIKSSMAAAKLDTWSRFYRSNPITYTFQFSVNPTTQEYKVICVWVI 727
                +NI                       F + N  +  +    +P   +YKV+C +V 
Sbjct: 172  PAIKFNI-----------------------FVQGNEHSLLYFLGHDPVLDQYKVVCTFVS 208

Query: 726  PQERTRKKTHYADVVCEVLTTGEGTWRRIDEVPTHVPTGDSVYVNGCIYWSNWWFKKQST 547
               +  + T  ++    VL  G G+W+RI+    H PT   + + G IY+  +       
Sbjct: 209  SSSQDLE-TIISEHWVFVLEVG-GSWKRIEFDQPHTPTRSGLCIGGVIYYLAF------- 259

Query: 546  CSDQPEAVLVKFDVENEKFGTIPIPSFIADQIGKYNACCGHNYTYYCQNIVLLEVEGRLA 367
             +   + ++V FDV +E+F  I  P  +               + Y  ++  +E  G+ A
Sbjct: 260  -TSMFQDIVVTFDVRSEEFNIIQAPLVL---------------SAYVDSLDFIEYGGKPA 303

Query: 366  ILSKT---KSHTVKLWMLEDNYTNNKRTTTSSNENWTEVIISL-PCQ--WVDNWCDLRFH 205
            I   T   ++  V LW+LE            +  NW+  ++SL PCQ   VDN   L   
Sbjct: 304  IFYHTSLKENGLVDLWVLE------------NAGNWSRTVLSLQPCQLHLVDNDIPLTLV 351

Query: 204  TVAGTTDGIILQVQLHNGMFLYFYSLEKKALVEFNISGI 88
                  + +++   L +  ++ +Y ++K  L +  I  +
Sbjct: 352  DTTQNGEVVLVPSDLCSPFYILYYDIQKNHLRKVEIQAM 390


>ref|NP_201072.1| putative F-box protein [Arabidopsis thaliana]
            gi|75264265|sp|Q9LV12.1|FB299_ARATH RecName:
            Full=Putative F-box protein At5g62660
            gi|8809662|dbj|BAA97213.1| unnamed protein product
            [Arabidopsis thaliana] gi|332010257|gb|AED97640.1|
            putative F-box protein [Arabidopsis thaliana]
          Length = 379

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 98/372 (26%), Positives = 167/372 (44%), Gaps = 10/372 (2%)
 Frame = -3

Query: 1257 SLMRFKCVCKRLKSVIENDSKFIG---LNLTHRKHHPSVCMVLLEALKPDAEDVGWLPVN 1087
            SLMRFKCV K   S+I   S+F     L +   +  P + M L++ L  ++  V   P  
Sbjct: 57   SLMRFKCVSKLWSSLIR--SRFFSNCYLTVKTPRRPPRLYMSLVDHLLCNSLMVCHYP-- 112

Query: 1086 HCQMYLLTANLYEGGGKLSETTTVGSVAKLNRSSVPKLDLKPINGLICLFNTASKEKIDF 907
             C+  LL+++       L +  T+  +   N   +  L L     ++C   TAS      
Sbjct: 113  -CESVLLSSS--SSAESLEQNLTIAGMGGRNMVVLRGLILY----VVC--RTAS------ 157

Query: 906  SFRIYNIGTRESTSW--IKSSMAAAKLDTWSRFYRSNPITYTFQFSVNPTTQEYKVICVW 733
               IYN  TR+S +   +KS++ A K   W      N + Y F +  +P   +YKV+C  
Sbjct: 158  ---IYNPTTRQSVTLPAVKSNILAQK-SHW------NSLLYFFGY--DPVLDQYKVVCTV 205

Query: 732  VIPQERTRKKTHYADVVCEVLTTGEGTWRRIDEVPTHVPTGDSVYVNGCIYWSNWWFKKQ 553
             +  +R ++ T    V   VL  G G+W+RI+    H+PT   + VNG IY+    +K++
Sbjct: 206  ALFSKRLKRITSEHWVF--VLEPG-GSWKRIEFDQPHLPTRLGLCVNGVIYYLASTWKRR 262

Query: 552  STCSDQPEAVLVKFDVENEKFGTIPIPSFIADQIGKYNACCGHNYTYYCQNIVLLEVEGR 373
                     ++V FDV +E+F  I  P  +               + + +++  +E  G+
Sbjct: 263  D--------IVVSFDVRSEEFSMIQGPLKV---------------SAFSESVGFIEYGGK 299

Query: 372  LAILSKT---KSHTVKLWMLEDNYTNNKRTTTSSNENWTEVIISLPCQW--VDNWCDLRF 208
             A+   T   ++  V LW+LED    ++++           ++  PCQ   VDN  D+ F
Sbjct: 300  PAVFDYTMMKQTGLVDLWVLEDAGKWSRKS-----------LVLQPCQMHLVDN--DIEF 346

Query: 207  HTVAGTTDGIIL 172
            +    T +G ++
Sbjct: 347  NVEGTTQNGEVI 358


>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 105/389 (26%), Positives = 155/389 (39%), Gaps = 13/389 (3%)
 Frame = -3

Query: 1257 SLMRFKCVCKRLKSVIENDSKFIGLNLTHRKHHPSVCMV-LLEALKPDAEDVGWLPVNHC 1081
            SLMRF+CVCK   S+I  D  F+ L+     + P  C   LL + K    +  ++  +H 
Sbjct: 49   SLMRFRCVCKTWSSLI-RDPFFVKLHQNQSLNKP--CKTGLLMSTKHQLFNSHFVFADH- 104

Query: 1080 QMYLLTANLYEGGGKLSETTTVGSVAKLNRSSVPKLD--LKPINGLICLFNTASKEKIDF 907
                      EG   L E T           S+PK    L   NGL C+ N   K +I  
Sbjct: 105  ----------EGKQALEEDTI----------SIPKSSNVLGIANGLACIVN--DKHRIS- 141

Query: 906  SFRIYNIGTRESTSWIKSSMAAAKLDTWSRFYRSNPITYTFQFSVNPTTQEYKVICVWVI 727
               +YN+ TREST+           D  S             F  +P   EYK++     
Sbjct: 142  ---VYNLSTRESTTIPPPPQEIRIQDRLS-------------FGFDPLANEYKIVKFCAH 185

Query: 726  PQERTRKKTHYADVVCEVLTTGEGTWRRIDEVPTHVPTG-------DSVYVNGCIYWSNW 568
             +E+            E+ T G   WRRI+    +   G       +++ V G IYW   
Sbjct: 186  DKEQ-----------FEIFTLGTERWRRINRKHYNFYGGAKWYDFKEAICVKGVIYW--- 231

Query: 567  WFKKQSTCSDQPEAVLVKFDVENEKFGTIPIPSFIADQIGKYNACCGHNYTYYCQNIVLL 388
                  + ++  +  L  FDV  EKF  + +P          N  C  +         L+
Sbjct: 232  ---MVKSMAESLKINLHSFDVHGEKFQQVAVPG---------NGLCLFS--------DLI 271

Query: 387  EVEGRLAILSKTK-SHTVKLWMLEDNYTNNKRTTTSSNENWTEVIISLPCQWVDNWCDLR 211
            ++EG LA++  ++  +  KL ML+D Y NN          WT  II +P        D+R
Sbjct: 272  QIEGCLAVIQDSECGNKFKLKMLQD-YHNNV---------WTHKIIDIPL----GPKDVR 317

Query: 210  FHTVAGT--TDGIILQVQLHNGMFLYFYS 130
            + T+AGT  T  I++     +G F  FYS
Sbjct: 318  YPTLAGTLGTGEILILDDHFSGCFRLFYS 346


>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 15/293 (5%)
 Frame = -3

Query: 960  INGLICLFNTASKE--KIDFSFRIYNIGTRESTSWIKSSMAAAKLDTWSRFYRSNPITYT 787
            +NGLICL+    +   K+ F   + N  TRE     + ++   +       +    I+  
Sbjct: 568  VNGLICLYEQHDRSFPKLSFRVTLCNPSTRE-----RVTLPPTRFSNPDLCFDHQHISLG 622

Query: 786  FQFSVNPTTQEYKVICVWVIPQERTRKKTHYADVVCEVLTTGEGTWRRIDEVPTHVPTGD 607
            F    +P+T+ YK++ VW            +  ++CE+LT G   WR I +   +     
Sbjct: 623  F----DPSTKTYKILKVWF---------ERFNSIMCEILTLGXRAWRIIKDGLEYTLEAK 669

Query: 606  SVYVNGCIYWSNWWFKKQSTCSDQPEAV-----LVKFDVENEKFGTIPIPSFIADQIGKY 442
             + +NG IYW++     +    D P  V     ++ FDV  EKF ++P+P     ++  +
Sbjct: 670  GICLNGTIYWAD----ARHISEDYPHFVVMQNRVIAFDVGEEKFRSVPVP----PEVPIW 721

Query: 441  NACCGHNYTYYCQNIVLLEVEGRLAI-----LSKTKSHTVKLWMLEDNYTNNKRTTTSSN 277
            + C             ++++ G +AI     ++   S  + +W LED          S N
Sbjct: 722  DKCMSS----------IIQIGGHMAIADYQHVATGISTVMLIWKLED----------SVN 761

Query: 276  ENWTEVIISLPCQWVDNWCD---LRFHTVAGTTDGIILQVQLHNGMFLYFYSL 127
              W++  I LP  W+        L    VA +  G I+ +   +G F  FY L
Sbjct: 762  GIWSQKRILLPESWIHRSVPNPRLCHFCVASSDGGNIILIP--SGFFRDFYVL 812


>ref|XP_002864811.1| hypothetical protein ARALYDRAFT_358470 [Arabidopsis lyrata subsp.
            lyrata] gi|297310646|gb|EFH41070.1| hypothetical protein
            ARALYDRAFT_358470 [Arabidopsis lyrata subsp. lyrata]
          Length = 556

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 94/373 (25%), Positives = 163/373 (43%), Gaps = 9/373 (2%)
 Frame = -3

Query: 1257 SLMRFKCVCKRLKSVIENDSKFIG---LNLTHRKHHPSVCMVLLEALKPDAEDVGWLPVN 1087
            SL+RFKC+ K   S+I   S+F     L +      P + M L++ L  ++ +V     N
Sbjct: 251  SLLRFKCISKLWSSLI--CSRFFSNRYLTVASPLRPPRLYMSLVDHLVCNSMEVCH---N 305

Query: 1086 HCQMYLLTANLYEGGGKLSETTTVGSVAKLNRSSVPKLDLKPINGLICLFNTASKEKIDF 907
            H +  +L ++       L +  T+  +   N        +  + GLI L+N   K  I  
Sbjct: 306  HPRESVLLSSSSSSAESLEQDLTLAGMGGRN--------MVVLRGLI-LYNVCRKACI-- 354

Query: 906  SFRIYNIGTRESTSWIKSSMAAAKLDTWSRFYRSNPITYTFQFSVNPTTQEYKVICVWVI 727
                YN  T +S +     + A K + ++  Y +  + Y F    +P   +YKV+C   +
Sbjct: 355  ----YNPTTTQSVT-----LPAVKSNIFAHEYYNKSVLYFFGH--DPVLDQYKVVCTVAV 403

Query: 726  PQERTRKKTHYADVVCEVLTTGEGTWRRIDEVPTHVPTGDSVYVNGCIYWSNWWFKKQST 547
              ++ ++ T    V   VL  G G+W+RI+    H+PT   + + G IY+        ST
Sbjct: 404  SSKKVKRITSEHWVF--VLEPG-GSWKRIEFDQPHIPTRLGLCIKGVIYY------LAST 454

Query: 546  CSDQPEAVLVKFDVENEKFGTIPIPSFIADQIGKYNACCGHNYTYYCQNIVLLEVEGRLA 367
            C  +   ++V FDV +E+F  I  P  +                 Y +++  +E  G+ A
Sbjct: 455  CKRRD--IVVSFDVRSEEFSMIQGPPVV---------------PAYGESVGFIEYGGKPA 497

Query: 366  ILSKT---KSHTVKLWMLEDNYTNNKRTTTSSNENWTEVIISLPCQW--VDNWCDLRFHT 202
            ++  T   ++  V LW+LED    ++++           ++  PCQ   VDN   L    
Sbjct: 498  VVDHTILEQTGLVDLWVLEDAGKWSRKS-----------LVLQPCQMHLVDNNIPL---M 543

Query: 201  VAGTT-DGIILQV 166
            V GTT +G I+ +
Sbjct: 544  VQGTTQNGEIINI 556


Top