BLASTX nr result
ID: Papaver22_contig00002620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00002620
(658 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 87 2e-15
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554... 84 2e-14
ref|NP_001147018.1| ribosomal RNA apurinic site specific lyase [... 83 4e-14
ref|NP_192778.2| F-box protein [Arabidopsis thaliana] gi|1453330... 83 5e-14
emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|72677... 83 5e-14
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 87.4 bits (215), Expect = 2e-15
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Frame = +1
Query: 22 DLKRVNAWITTAVKCEVKEFIFSWRNSHPSNGEVMPDSLFTCQSLTTLDFQFPELDVLHL 201
D RV WI+ AV VK+ R+ S V+P LF C++LT L+ P +L L
Sbjct: 109 DPSRVGTWISAAVNRNVKDLYLELRDFEASF--VLPHCLFNCETLTELEINMPY--ILKL 164
Query: 202 PNSISLPRLKILRLTNVAYEDQKSAGKLFSSCPVLEELCLTDCGWENVQFIRISAPRLKS 381
P+SISL LKIL L V + D S +LF S P L EL + +C W N+ + ISAP+L+S
Sbjct: 165 PSSISLSCLKILNLYEVIFTDDHSTQQLF-SLPNLVELEIHECNWMNLVAVSISAPKLQS 223
Query: 382 FTLN-GCLGS--YMESARVKIDAPNLLSFTFCDWLPEDFVVDSFPLLQDAFLYYNYGD 546
++ C S + V+I +L FT L D+ + +++ ++ D
Sbjct: 224 LDIHEPCQSSPASLGGCHVRIFGTHLADFTIIGTLSNDYCLYESSVVETCISIFSAAD 281
>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
F-box family-3 [Medicago truncatula]
Length = 642
Score = 84.0 bits (206), Expect = 2e-14
Identities = 64/184 (34%), Positives = 99/184 (53%), Gaps = 5/184 (2%)
Frame = +1
Query: 121 VMPDSLFTCQSLTTL--DFQFPELDVLHLPNSISLPRLKILRLTNVAYEDQKSAGKLFSS 294
V+P S +SL L QF LH+P+ I P LK L +TNV + ++ SA +LFS
Sbjct: 305 VLPHSFPAFESLNELRLGLQF----TLHIPSGICFPILKTLVVTNVTFANENSAQQLFSG 360
Query: 295 CPVLEELCLTDCGWENVQFIRISAPRLKSFTLNGCL--GSYMESARVKIDAPNLLS-FTF 465
CPVL+EL L +C WE++ I +S L+ T++ + Y ++KIDA NLLS +
Sbjct: 361 CPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAVNLLSLYCI 420
Query: 466 CDWLPEDFVVDSFPLLQDAFLYYNYGDIESRFLPLSKFVMKLCNVKVLKISGAYFKILKL 645
C+ + E V+ L+ DAF++ Y P + C++++LK G+ K LKL
Sbjct: 421 CNPIIEVIPVNLTSLV-DAFIFLGY------VYPHDEPYAAQCSIELLKGLGS-VKSLKL 472
Query: 646 GNAL 657
+ +
Sbjct: 473 NDII 476
>ref|NP_001147018.1| ribosomal RNA apurinic site specific lyase [Zea mays]
gi|195606500|gb|ACG25080.1| ribosomal RNA apurinic site
specific lyase [Zea mays]
Length = 419
Score = 83.2 bits (204), Expect = 4e-14
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 34 VNAWITTAVKCEVKEFIFSWRNSHPSNGEVMPDSLFTCQSLTTLDFQFPELDVLHLPNSI 213
+ W+ AV ++E S+ + + N ++P+SLF C+SL L +F L ++ +P++
Sbjct: 92 IRQWVEIAVSRHLRELDVSYSSDNKEN--MVPNSLFACKSLVVLKLRF--LTLMDVPSTA 147
Query: 214 SLPRLKILRLTNVAYEDQKSAGKLFSSCPVLEELCLTDCGWENVQFIRISAPRLKSFTLN 393
LP LK L L V YEDQK L S CPVLE+L + E++Q I+ P L+ L+
Sbjct: 148 CLPSLKTLLLELVVYEDQKPFEALLSICPVLEDLEVWFREDESIQEFTINVPSLRKLCLH 207
Query: 394 GCLGSYMES-ARVKIDAPNLLSFTFCDWLPEDFVVDSFPLLQDA 522
+ Y S R +ID P L DW +V + P L+ A
Sbjct: 208 --VSYYWSSLERYEIDTPCLEYLELADWNDSPCLVKNMPKLEKA 249
>ref|NP_192778.2| F-box protein [Arabidopsis thaliana]
gi|145333003|ref|NP_001078367.1| F-box protein
[Arabidopsis thaliana]
gi|142989615|sp|Q9SV82.2|FBD40_ARATH RecName:
Full=FBD-associated F-box protein At4g10400
gi|119935957|gb|ABM06044.1| At4g10400 [Arabidopsis
thaliana] gi|332657476|gb|AEE82876.1| F-box protein
[Arabidopsis thaliana] gi|332657477|gb|AEE82877.1| F-box
protein [Arabidopsis thaliana]
Length = 409
Score = 82.8 bits (203), Expect = 5e-14
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Frame = +1
Query: 10 NEYFDLKRVNAWITTAVKCEVKEF-IFSWRNSHPSNGEVMPDSLFTCQSLTTLDFQFPEL 186
+ +F + + W+ AV ++E I+S N ++P SL+TC+SL L L
Sbjct: 84 DSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQN--ILPSSLYTCKSLVILKLDGGVL 141
Query: 187 DVLHLPNSISLPRLKILRLTNVAYEDQKSAGKLFSSCPVLEELCLTDCGWENVQFIRISA 366
L +P + LP LK L L V Y Q S +L +CPVLE+L + +N+ + +
Sbjct: 142 --LDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIV 199
Query: 367 PRLKSFTLNGCLGSYMESARVKIDAPNLLSFTFCDWLPED--FVVDSFPLLQDAFLYYNY 540
P L+ +L S S ID P+LLSF D F++++ P L++A++ +
Sbjct: 200 PSLQRLSL-----STPSSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPF 254
Query: 541 GDIESRFLPLSKFVMKLCNVKVLKIS 618
DI+S + + +VK L IS
Sbjct: 255 ADIKS-------LIGSITSVKRLAIS 273
>emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|7267737|emb|CAB78163.1|
putative protein [Arabidopsis thaliana]
Length = 326
Score = 82.8 bits (203), Expect = 5e-14
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Frame = +1
Query: 10 NEYFDLKRVNAWITTAVKCEVKEF-IFSWRNSHPSNGEVMPDSLFTCQSLTTLDFQFPEL 186
+ +F + + W+ AV ++E I+S N ++P SL+TC+SL L L
Sbjct: 84 DSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQN--ILPSSLYTCKSLVILKLDGGVL 141
Query: 187 DVLHLPNSISLPRLKILRLTNVAYEDQKSAGKLFSSCPVLEELCLTDCGWENVQFIRISA 366
L +P + LP LK L L V Y Q S +L +CPVLE+L + +N+ + +
Sbjct: 142 --LDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIV 199
Query: 367 PRLKSFTLNGCLGSYMESARVKIDAPNLLSFTFCDWLPED--FVVDSFPLLQDAFLYYNY 540
P L+ +L S S ID P+LLSF D F++++ P L++A++ +
Sbjct: 200 PSLQRLSL-----STPSSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPF 254
Query: 541 GDIESRFLPLSKFVMKLCNVKVLKIS 618
DI+S + + +VK L IS
Sbjct: 255 ADIKS-------LIGSITSVKRLAIS 273