BLASTX nr result
ID: Papaver22_contig00002394
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00002394 (4694 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 1189 0.0 gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 1152 0.0 gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 1149 0.0 gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 1141 0.0 gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 1139 0.0 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 1189 bits (3077), Expect = 0.0 Identities = 636/1261 (50%), Positives = 824/1261 (65%), Gaps = 24/1261 (1%) Frame = -3 Query: 3831 LQKDLTSELYLKRRLHAFRMSPGKSMMDHINEFNKICSDLSNISVTISDTDKSMILLCSL 3652 + KDLTS+++LK++L ++ S+MDH++ F +I +DL ++ V + D +ILLCSL Sbjct: 1 MTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEEDLGLILLCSL 60 Query: 3651 PPSYDAFVDYLLSGKTDEGEDKDKLVFDDVVSALQAKALRKQEFSDE---AQVEGLFVDX 3481 P SY F D +L + D L +V AL AK K+ E +Q EGL V Sbjct: 61 PSSYANFRDTILYSR-------DTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRG 113 Query: 3480 XXXXXXXXXXXXXXXXSDIE-----------CYYCRKPGHIRADCLKLKARDEKREKSDS 3334 S C YC++ GH ++C KL+ +D++ K Sbjct: 114 RQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIP 173 Query: 3333 KNVVASVAEGSEALEDPMCGFDEEVLTVTSKSYLNDGWMLDSGASYHMCPSKDCFTTYRE 3154 K EG A+ E ++ + +D W+LD+ +YHMCP++D F TY Sbjct: 174 KG--KKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEA 231 Query: 3153 VNGGTVMMGNSNACKTVGVGTVQVRSH-GVITTLSEVRHVPDLRKSLISLGVLESLGYKY 2977 V GGTV+MG+ C+ G+GTVQ++ G I TL +VRH+P+L++SLISL L+ GYKY Sbjct: 232 VQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKY 291 Query: 2976 AAEYGFLKVFYNGSLKMTGE-RHGNLYFLRGDIVCGG-AMVSQSIDEKQVESTRLWHMRL 2803 + G LKV + M + ++ NLY LRG + G A VS S+ ++T LWHMRL Sbjct: 292 SGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNS--DATNLWHMRL 349 Query: 2802 GHMSEKGMSVLSSKGLLGGEKTCKLDFCEHCIFGKQCRSSFGTAVHHTQGMLDYIHSDVW 2623 GHMSE G++ LS +GLL G+ KL FCEHCIFGK R F T+ H T+G+LDY+HSD+W Sbjct: 350 GHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLW 409 Query: 2622 GPSRTVSKGGARWFVTFIDDFSRRVWLYTMKHKNEVTEVFKKWKTMVEKQLGRVVKKIRS 2443 GP+R S GGAR+ +T +DD+SR+VW Y +KHK + +VFK+WKTMVE+Q R VK +R+ Sbjct: 410 GPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRT 469 Query: 2442 DNGGEYIEDPLKEFCEEQGIVRHFTVKGTPQQNGVAERMNRTLLERARCMLSNASLDKIW 2263 DNG E K +C+ +GIVRH+TV TPQQNGVAERMNRT++ +ARCMLSNASL K + Sbjct: 470 DNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQF 529 Query: 2262 WAEAVNTACYLVNRSPSTAIKCKSPMEVWTGNPVNYSNLRVFGCPAYFHVKEDKLGVRAK 2083 WAEAV+TACYL+NRSPS AI K+P+EVW+G+P NYS+LRVFGC AY HV KL R Sbjct: 530 WAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVI 589 Query: 2082 KAIFLGYPLGVKGYRLWCPELNKFIISRDVTFNERAMLDSKKSTDWDSQIXXXXXXXXXX 1903 K IFLGY GVKGY+LWCPE K +ISR+V F+E ML K ST+ Sbjct: 590 KCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTN-------VPVESQEK 642 Query: 1902 XSMQVEQRVPSSSTIXXXXXXXXXXXXXXXXXXXESTQQQIE-NIPSLTSQRERRPPTRY 1726 S+QVE + S QQ + +I +R +PP RY Sbjct: 643 VSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRRY 702 Query: 1725 GFD-EYASYALSVFED-----EPFTFEEAMSTTHAIEWKTAMDEEMKSLHKNHTWELVKL 1564 + +YALSV E+ EP T+ +A+ + W TAM +EM+SL KNH+WEL KL Sbjct: 703 IEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKL 762 Query: 1563 PKGRKKIGCKWVYTVKDGIPDSKGIVSGVRYKARLVAKGYAQREGVDYNEVFSPVVKHTS 1384 PK +K I CKW++ K+G+ S RYKARLVAKGY+Q G+D+N+VFSPVVKH+S Sbjct: 763 PKEKKPIRCKWIFKRKEGMSPS----DEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSS 818 Query: 1383 IRVLLAFVAQFDLELEQLDVKTAFLHGNLEEDIYMSQPIGYEVAGKEDYVCRLQKSLYGL 1204 IR LL+ VA D ELEQ+DVKTAFLHG LEEDIYM QP G+ V GKE+ VCRL+KSLYGL Sbjct: 819 IRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGL 878 Query: 1203 KQSPRQWYKRFDTFMLQQKYTRSKYDQCVYFKKFPGGSFVYLLLYVDDMLIAAKSKSEID 1024 KQSPRQWYKRFD+FML QK+ RS YD CVY K GS +YLLLYVDDMLIAAK KSEI Sbjct: 879 KQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIA 937 Query: 1023 VLKKQLSLEFEMKDLGPAKKILGMEITRDRSKGKLCLTQKSYLEKVLRRFGMHNSKAISV 844 LK QLS EFEMKDLG AKKILGMEITR+R GKL L+QK Y+EKVL RF MH++K +S Sbjct: 938 KLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVST 997 Query: 843 PIPSTVKLSKQLCPTTTEEMEFMSKVPYANAVGSLMYAMVCTRPDTAQAVGLVSRYMANP 664 + + +LS LCP + ++E+MS+VPY++AV SLMYAMVC+RPD + A+ +VSRYMANP Sbjct: 998 LLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANP 1057 Query: 663 GRAHWYAVKGILRYLNGTLDIGLVFEKEQSLKVCGFVDSDYAGDRDKCRSTSGYCFTLSG 484 G+ HW AV+ I RYL GT L F + S + G+VDSD+AGD D+ RS +GY FT+ G Sbjct: 1058 GKEHWKAVQWIFRYLRGTSSACLQFGR-SSDGLVGYVDSDFAGDLDRRRSLTGYVFTVGG 1116 Query: 483 APISWRSMLQPIVALSTTEAEYIAVTEAVKEALWLRGLVKDLGMIQRSVVVNCDSQSAIH 304 +SW++ LQ VALSTTEAEY+A++EA KE +WLRGL +L + + + CDSQSAI Sbjct: 1117 CAVSWKASLQATVALSTTEAEYMAISEACKEVIWLRGLYTELCGVTSCINIFCDSQSAIC 1176 Query: 303 LAKNQVYHARTKHIDIRYHKVREVVDNGLVQLLKVDTEDNPADMLTKVVPKVKFERCLSL 124 L K+Q++H RTKHID+RYH +R V+ G V++ K+ T DNP DM+TK VP KFE C SL Sbjct: 1177 LTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPATKFELCSSL 1236 Query: 123 I 121 + Sbjct: 1237 V 1237 >gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 1152 bits (2981), Expect = 0.0 Identities = 624/1342 (46%), Positives = 846/1342 (63%), Gaps = 18/1342 (1%) Frame = -3 Query: 4095 FDIIKFNGKNNFTSWQTDVKDILVSMKQIKAIKAKPATLPKDWTDEKWADLDLMACSTIR 3916 F+I KFNG+N F+ W+ ++ IL + AI +PA D TDEKW ++D A + + Sbjct: 5 FEIEKFNGRN-FSLWKLKIRAILRKDNCLDAIDGRPA----DITDEKWKEMDDNAVANLH 59 Query: 3915 LCLSRDITHNFSSETSAKVLWEKLEKLYLQKDLTSELYLKRRLHAFRMSPGKSMMDHINE 3736 L ++ + + + + +AK +W+ L KLY K L + ++LKRRL+ RM S+ DHIN Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINT 119 Query: 3735 FNKICSDLSNISVTISDTDKSMILLCSLPPSYDAFVDYLLSGKTDEGEDKDKLVFDDVVS 3556 N + S L+ I++ +++ +LL SLP SYD + + + D L FDDV Sbjct: 120 LNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNI-----ADTLHFDDVAG 174 Query: 3555 AL---QAKALRKQEFSDEAQ-------VEGLFVDXXXXXXXXXXXXXXXXXSDIECYYCR 3406 A+ +++ K+E S+ ++ G + +I+CY C Sbjct: 175 AILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCG 234 Query: 3405 KPGHIRADCLKLKARDEKR-EKSDSKNVVASVAEGSEALEDPMCGFDEEVLTVTSKSYLN 3229 GH++ +C +K EK E S S+ VAS ++ E L + E + + LN Sbjct: 235 MKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEIL------YSEAATSSKGERRLN 288 Query: 3228 DGWMLDSGASYHMCPSKDCFTTYREVNGGTVMMGNSNACKTVGVGTVQVRSH-GVITTLS 3052 D W++DSGA++HM P +D F +Y ++ G+V MGN +A + GVGT++++ H G + + Sbjct: 289 DVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348 Query: 3051 EVRHVPDLRKSLISLGVLESLGYKYAAEYGFLKVFYNGSLKMTGER-HGNLYFLRGDIVC 2875 VRHV L+K+L+S+G L+ LG K E G LKV + M E+ NLY L GD + Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQ 408 Query: 2874 -GGAMVSQSIDEKQVESTRLWHMRLGHMSEKGMSVLSSKGLLGGEKTCKLDFCEHCIFGK 2698 A V+ + E E+T +WH RLGHMSE+G+ VL + LL G KT L FCEHC+ K Sbjct: 409 EADASVAAASQE---ETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISK 465 Query: 2697 QCRSSFGTAVHHTQGMLDYIHSDVWGPSRTVSKGGARWFVTFIDDFSRRVWLYTMKHKNE 2518 Q R F ++ +LD IHSDVW S +S GGAR+FV+FIDD+SRR+W+Y +K K++ Sbjct: 466 QHRLKFARVTTRSKHILDLIHSDVW-ESPELSLGGARYFVSFIDDYSRRLWVYPIKKKSD 524 Query: 2517 VTEVFKKWKTMVEKQLGRVVKKIRSDNGGEYIEDPLKEFCEEQGIVRHFTVKGTPQQNGV 2338 V VFK +K +E + G+ +K +R+DNGGEY++ FC+++GIVR FTV TPQQNGV Sbjct: 525 VFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGV 584 Query: 2337 AERMNRTLLERARCMLSNASLDKIWWAEAVNTACYLVNRSPSTAIKCKSPMEVWTGNPVN 2158 AERMNRTLLER R ML A + K +WAEAV TACY++NRSPSTAI K+PME+W G PV+ Sbjct: 585 AERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVD 644 Query: 2157 YSNLRVFGCPAYFHVKED---KLGVRAKKAIFLGYPLGVKGYRLWCPELNKFIISRDVTF 1987 YS+L VFGCP Y KL +++K IFLGY VKGYRLW P K ++SRDV F Sbjct: 645 YSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVF 704 Query: 1986 NERAMLDSKKSTDWDSQIXXXXXXXXXXXSMQVEQRVPSSSTIXXXXXXXXXXXXXXXXX 1807 E L SK+ D S+ +Q+E++ S + Sbjct: 705 AENE-LQSKQKNDSTSK---------ETAIVQMEEKSKESDSSEAEPVHEEQEPDDVNNG 754 Query: 1806 XXESTQQQIENIPSLTSQRERRPPTRYGFDEYASYALSVFEDEPFTFEEAMSTTHAIEWK 1627 ST+Q + PS S Y + +Y L E EP TF EA++ + A +W Sbjct: 755 VRRSTRQTQK--PSWQSD--------YVMTSHDAYCLITEEGEPSTFHEALNGSDASQWM 804 Query: 1626 TAMDEEMKSLHKNHTWELVKLPKGRKKIGCKWVYTVK-DGIPDSKGIVSGVRYKARLVAK 1450 TAM EEM++LH+N TWELV+LPKGRK IG KWVY +K DG + RY+ARLV K Sbjct: 805 TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVE------RYRARLVVK 858 Query: 1449 GYAQREGVDYNEVFSPVVKHTSIRVLLAFVAQFDLELEQLDVKTAFLHGNLEEDIYMSQP 1270 GYAQ+EG+D+NE+FSPVV+ T+IRV+LA A DL LEQLDVKTAFLHG LEE+IYM QP Sbjct: 859 GYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQP 918 Query: 1269 IGYEVAGKEDYVCRLQKSLYGLKQSPRQWYKRFDTFMLQQKYTRSKYDQCVYFKKFPGGS 1090 G++ GKE+ VCRL KSLYGLKQ+PR WYKRFD+F++ Y+R D C Y+K+F G Sbjct: 919 EGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGND 978 Query: 1089 FVYLLLYVDDMLIAAKSKSEIDVLKKQLSLEFEMKDLGPAKKILGMEITRDRSKGKLCLT 910 F+ LLLYVDDML+ +K + LK QL+ EF+MKDLGPA KILGM+I RDR K+ L+ Sbjct: 979 FIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLS 1038 Query: 909 QKSYLEKVLRRFGMHNSKAISVPIPSTVKLSKQLCPTTTEEMEFMSKVPYANAVGSLMYA 730 QK+YL KVLRRF M + K IS P+P KLS + P+ E MS+VPYA+AVGSLMYA Sbjct: 1039 QKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYA 1098 Query: 729 MVCTRPDTAQAVGLVSRYMANPGRAHWYAVKGILRYLNGTLDIGLVFEKEQSLKVCGFVD 550 M+CTRPD AQAVG+VSR+MA+PG+ HW AVK I+RY+ GT + + F + L V G+VD Sbjct: 1099 MICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSE-LTVRGYVD 1157 Query: 549 SDYAGDRDKCRSTSGYCFTLSGAPISWRSMLQPIVALSTTEAEYIAVTEAVKEALWLRGL 370 SD+AGD DK +ST+GY FTL+G +SW S LQ +VALSTTEAEY+A T+A KEA+W++ L Sbjct: 1158 SDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRL 1217 Query: 369 VKDLGMIQRSVVVNCDSQSAIHLAKNQVYHARTKHIDIRYHKVREVVDNGLVQLLKVDTE 190 +++LG Q + V CDSQSA+H+A+N +H+RTKHI ++YH VREVV+ G V + K+ T Sbjct: 1218 MEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTN 1277 Query: 189 DNPADMLTKVVPKVKFERCLSL 124 DN AD +TK + KF C SL Sbjct: 1278 DNLADAMTKSINTDKFIWCRSL 1299 >gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 1149 bits (2972), Expect = 0.0 Identities = 619/1341 (46%), Positives = 843/1341 (62%), Gaps = 18/1341 (1%) Frame = -3 Query: 4095 FDIIKFNGKNNFTSWQTDVKDILVSMKQIKAIKAKPATLPKDWTDEKWADLDLMACSTIR 3916 F+I KFNG+N F+ W+ ++ IL + AI +PA D TDEKW ++D A + + Sbjct: 5 FEIEKFNGRN-FSLWKLKIRAILRKDNCLDAIDGRPA----DITDEKWKEMDDNAVANLH 59 Query: 3915 LCLSRDITHNFSSETSAKVLWEKLEKLYLQKDLTSELYLKRRLHAFRMSPGKSMMDHINE 3736 L ++ + + + + +AK +W+ L KLY K L + ++LKRRL+ RM S+ DHIN Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINT 119 Query: 3735 FNKICSDLSNISVTISDTDKSMILLCSLPPSYDAFVDYLLSGKTDEGEDKDKLVFDDVVS 3556 N + S L+ I++ +++ +LL SLP SYD + + + D L FDDV Sbjct: 120 LNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNIT-----DTLHFDDVAG 174 Query: 3555 AL---QAKALRKQEFSDEAQ-------VEGLFVDXXXXXXXXXXXXXXXXXSDIECYYCR 3406 A+ +++ K+E S+ ++ G + +I+CY C Sbjct: 175 AILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCG 234 Query: 3405 KPGHIRADCLKLKARDEKR-EKSDSKNVVASVAEGSEALEDPMCGFDEEVLTVTSKSYLN 3229 GH++ +C +K EK E S S+ VAS ++ E L + E + + LN Sbjct: 235 MKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEIL------YSEAATSSKGERRLN 288 Query: 3228 DGWMLDSGASYHMCPSKDCFTTYREVNGGTVMMGNSNACKTVGVGTVQVRSH-GVITTLS 3052 D W++DSGA++HM P +D F +Y ++ G+V MGN +A + GVGT++++ H G + + Sbjct: 289 DVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348 Query: 3051 EVRHVPDLRKSLISLGVLESLGYKYAAEYGFLKVFYNGSLKMTGER-HGNLYFLRGDIVC 2875 VRHV L+K+L+S+G L+ LG K E G LKV + M E+ NLY L GD + Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQ 408 Query: 2874 -GGAMVSQSIDEKQVESTRLWHMRLGHMSEKGMSVLSSKGLLGGEKTCKLDFCEHCIFGK 2698 A V+ S E E+T +WH RLGHMSE+G+ VL+ + LL G K L FCEHC+ K Sbjct: 409 EADASVAASSQE---ETTMMWHQRLGHMSERGLKVLAERNLLHGLKAVNLPFCEHCVISK 465 Query: 2697 QCRSSFGTAVHHTQGMLDYIHSDVWGPSRTVSKGGARWFVTFIDDFSRRVWLYTMKHKNE 2518 Q R F ++ +LD IHSDVW S +S GGAR+FV+FIDD+SRR+W+Y +K K++ Sbjct: 466 QHRLKFARVTTRSKHILDLIHSDVW-ESPEISLGGARYFVSFIDDYSRRLWVYPIKKKSD 524 Query: 2517 VTEVFKKWKTMVEKQLGRVVKKIRSDNGGEYIEDPLKEFCEEQGIVRHFTVKGTPQQNGV 2338 V VFK +K +E + + +K +R+DNGGEYI+ FC+++GIVR FTV TPQQNGV Sbjct: 525 VFPVFKAFKAQIELETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGV 584 Query: 2337 AERMNRTLLERARCMLSNASLDKIWWAEAVNTACYLVNRSPSTAIKCKSPMEVWTGNPVN 2158 AERMNRTLLER R ML A + K +WAEAV TACY++NRSPSTAI K+PME+W G PV+ Sbjct: 585 AERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVD 644 Query: 2157 YSNLRVFGCPAYFHVKED---KLGVRAKKAIFLGYPLGVKGYRLWCPELNKFIISRDVTF 1987 YS+L VFGCP Y KL +++K IFLGY VKGYRLW P K ++SRDV F Sbjct: 645 YSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVF 704 Query: 1986 NERAMLDSKKSTDWDSQIXXXXXXXXXXXSMQVEQRVPSSSTIXXXXXXXXXXXXXXXXX 1807 E + +K+ + +Q+E++ S + Sbjct: 705 AENELQSEQKNDSTSKETAI----------VQMEEKSKESDSSEAESVHEEQEPDDVNDG 754 Query: 1806 XXESTQQQIENIPSLTSQRERRPPTRYGFDEYASYALSVFEDEPFTFEEAMSTTHAIEWK 1627 ST+Q + PS S Y + +Y L E EP TF EA++ + A +W Sbjct: 755 VRRSTRQTQK--PSWQSD--------YVMTSHDAYCLITEEGEPSTFHEALNGSDASQWM 804 Query: 1626 TAMDEEMKSLHKNHTWELVKLPKGRKKIGCKWVYTVK-DGIPDSKGIVSGVRYKARLVAK 1450 TAM EEM++LH+N TWELV+LPKGRK IG KWVY +K DG + RY+ARLV K Sbjct: 805 TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVE------RYRARLVVK 858 Query: 1449 GYAQREGVDYNEVFSPVVKHTSIRVLLAFVAQFDLELEQLDVKTAFLHGNLEEDIYMSQP 1270 GYAQ+EG+D+NE+FSPVV+ T+IRV+LA A DL LEQLDVKTAFLHG LEE+IYM QP Sbjct: 859 GYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQP 918 Query: 1269 IGYEVAGKEDYVCRLQKSLYGLKQSPRQWYKRFDTFMLQQKYTRSKYDQCVYFKKFPGGS 1090 G++ GKE+ VCRL KSLYGLKQ+PR WYKRFD+F++ Y+R D C Y+K+F G Sbjct: 919 EGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGND 978 Query: 1089 FVYLLLYVDDMLIAAKSKSEIDVLKKQLSLEFEMKDLGPAKKILGMEITRDRSKGKLCLT 910 F+ LLLYVDDML+ +K + LK QL+ EF+MKDLGPA KILGM+I RDR K+ L+ Sbjct: 979 FIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLS 1038 Query: 909 QKSYLEKVLRRFGMHNSKAISVPIPSTVKLSKQLCPTTTEEMEFMSKVPYANAVGSLMYA 730 QK+YL KVLRRF M + K IS P+P KLS + P+ E MS+VPYA+AVGSLMYA Sbjct: 1039 QKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYA 1098 Query: 729 MVCTRPDTAQAVGLVSRYMANPGRAHWYAVKGILRYLNGTLDIGLVFEKEQSLKVCGFVD 550 M+CTRPD AQAVG+VSR+MA+PG+ HW AVK I+RY+ GT + + F + L V G+VD Sbjct: 1099 MICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSE-LTVRGYVD 1157 Query: 549 SDYAGDRDKCRSTSGYCFTLSGAPISWRSMLQPIVALSTTEAEYIAVTEAVKEALWLRGL 370 SD+AGD DK +ST+GY FTL+G +SW S LQ +VALSTTEAEY+A T+A KEA+W++ L Sbjct: 1158 SDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRL 1217 Query: 369 VKDLGMIQRSVVVNCDSQSAIHLAKNQVYHARTKHIDIRYHKVREVVDNGLVQLLKVDTE 190 +++LG Q + V CDSQSA+H+A+N +H+RTKHI ++YH VREVV+ G V + K+ T Sbjct: 1218 MEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTN 1277 Query: 189 DNPADMLTKVVPKVKFERCLS 127 DN AD++TK + KF C S Sbjct: 1278 DNLADVMTKPINADKFVWCRS 1298 >gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 1141 bits (2951), Expect = 0.0 Identities = 615/1341 (45%), Positives = 841/1341 (62%), Gaps = 18/1341 (1%) Frame = -3 Query: 4095 FDIIKFNGKNNFTSWQTDVKDILVSMKQIKAIKAKPATLPKDWTDEKWADLDLMACSTIR 3916 F+I KFNG+N F+ W+ ++ IL + AI + A D TDEKW ++D A + + Sbjct: 5 FEIEKFNGRN-FSLWKLKIRAILRKDNCLDAIDGRLA----DITDEKWKEMDDNAVANLH 59 Query: 3915 LCLSRDITHNFSSETSAKVLWEKLEKLYLQKDLTSELYLKRRLHAFRMSPGKSMMDHINE 3736 L ++ + + + + +AK +W+ L KLY K L + ++LKRRL+ +M S+ DHIN Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMGESTSVTDHINT 119 Query: 3735 FNKICSDLSNISVTISDTDKSMILLCSLPPSYDAFVDYLLSGKTDEGEDKDKLVFDDVVS 3556 N + S L+ I+ +++ +LL SLP SYD + + + D L FDDV Sbjct: 120 LNTLFSQLTASDFKIAKNERAELLLQSLPDSYDQLIINITNNNI-----ADTLHFDDVAG 174 Query: 3555 AL---QAKALRKQEFSDEAQ-------VEGLFVDXXXXXXXXXXXXXXXXXSDIECYYCR 3406 A+ +++ K+E S+ ++ G + +I+CY C Sbjct: 175 AILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNIKCYGCG 234 Query: 3405 KPGHIRADCLKLKARDEKR-EKSDSKNVVASVAEGSEALEDPMCGFDEEVLTVTSKSYLN 3229 GH++ +C +K EK E S S+ VAS ++ E L + E + + LN Sbjct: 235 MKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEIL------YSEAATSSKGERRLN 288 Query: 3228 DGWMLDSGASYHMCPSKDCFTTYREVNGGTVMMGNSNACKTVGVGTVQVRSH-GVITTLS 3052 D W++DSGA++HM P +D F +Y ++ G+V MGN +A + GVGT++++ H G + + Sbjct: 289 DVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348 Query: 3051 EVRHVPDLRKSLISLGVLESLGYKYAAEYGFLKVFYNGSLKMTGER-HGNLYFLRGDIVC 2875 VRHV L+K+L+S+G L+ LG K E G LKV + M E+ NLY L GD + Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQ 408 Query: 2874 -GGAMVSQSIDEKQVESTRLWHMRLGHMSEKGMSVLSSKGLLGGEKTCKLDFCEHCIFGK 2698 A V+ + E E+T +WH RLGHMSE+G+ VL + LL G KT L FCEHC+ K Sbjct: 409 EADASVAAASQE---ETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVMSK 465 Query: 2697 QCRSSFGTAVHHTQGMLDYIHSDVWGPSRTVSKGGARWFVTFIDDFSRRVWLYTMKHKNE 2518 Q R F ++ +LD IHSDVW S +S GGAR+FV+FIDD+SRR+W+Y +K K++ Sbjct: 466 QHRLKFARVTTRSKHILDLIHSDVW-ESPEISLGGARYFVSFIDDYSRRLWVYPIKKKSD 524 Query: 2517 VTEVFKKWKTMVEKQLGRVVKKIRSDNGGEYIEDPLKEFCEEQGIVRHFTVKGTPQQNGV 2338 V VFK +K +E + + +K +R+DNGGEY++ FC+++GIVR FTV TPQQNGV Sbjct: 525 VFPVFKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGV 584 Query: 2337 AERMNRTLLERARCMLSNASLDKIWWAEAVNTACYLVNRSPSTAIKCKSPMEVWTGNPVN 2158 AERMNRTLLER R ML A + K +WAEA TACY++NRSPSTAI K+PME+W G PV+ Sbjct: 585 AERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVD 644 Query: 2157 YSNLRVFGCPAYFHV---KEDKLGVRAKKAIFLGYPLGVKGYRLWCPELNKFIISRDVTF 1987 YS+L VFGCP Y ++ KL +++K IFLGY VKGYRLW P K ++SRDV F Sbjct: 645 YSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVF 704 Query: 1986 NERAMLDSKKSTDWDSQIXXXXXXXXXXXSMQVEQRVPSSSTIXXXXXXXXXXXXXXXXX 1807 E + +K+ + +Q+E++ S + Sbjct: 705 AENELQSEQKNDSTSKETAI----------VQMEEKSKESDSSEAESVHEEQEPDDVNDG 754 Query: 1806 XXESTQQQIENIPSLTSQRERRPPTRYGFDEYASYALSVFEDEPFTFEEAMSTTHAIEWK 1627 ST+Q + PS S Y + +Y L E EP TF EA++ + A +W Sbjct: 755 VRRSTRQTQK--PSWQSD--------YVMTSHDAYCLITEEGEPSTFHEALNGSDASQWM 804 Query: 1626 TAMDEEMKSLHKNHTWELVKLPKGRKKIGCKWVYTVK-DGIPDSKGIVSGVRYKARLVAK 1450 TAM EEM++LH+N TWELV+LPKGRK IG KWVY +K DG + RY+ARLV K Sbjct: 805 TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVE------RYRARLVVK 858 Query: 1449 GYAQREGVDYNEVFSPVVKHTSIRVLLAFVAQFDLELEQLDVKTAFLHGNLEEDIYMSQP 1270 GYAQ+EG+D+NE+FSPVV+ T+IRV+LA A DL LEQLDVKTAFLHG LEE+IYM QP Sbjct: 859 GYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQP 918 Query: 1269 IGYEVAGKEDYVCRLQKSLYGLKQSPRQWYKRFDTFMLQQKYTRSKYDQCVYFKKFPGGS 1090 G++ GKE+ VCRL KSLYGLKQ+PR WYKRFD+F++ Y R D C Y+K+F G Sbjct: 919 EGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGND 978 Query: 1089 FVYLLLYVDDMLIAAKSKSEIDVLKKQLSLEFEMKDLGPAKKILGMEITRDRSKGKLCLT 910 F+ LLLYVDDML+ +K + LK QL+ EF+MKDLGPA KILGM+I RDR K+ L+ Sbjct: 979 FIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLS 1038 Query: 909 QKSYLEKVLRRFGMHNSKAISVPIPSTVKLSKQLCPTTTEEMEFMSKVPYANAVGSLMYA 730 QK+YL KVLRRF M + K IS P+P KLS + P+ E MS+VPYA+AVGSLMYA Sbjct: 1039 QKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYA 1098 Query: 729 MVCTRPDTAQAVGLVSRYMANPGRAHWYAVKGILRYLNGTLDIGLVFEKEQSLKVCGFVD 550 M+CTRPD AQAVG+VSR+MA+PG+ HW AVK I+RY+ GT + + F + L V G+VD Sbjct: 1099 MICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSE-LTVWGYVD 1157 Query: 549 SDYAGDRDKCRSTSGYCFTLSGAPISWRSMLQPIVALSTTEAEYIAVTEAVKEALWLRGL 370 SD+AGD DK +ST+GY FTL+G +SW S LQ +VALSTTEAEY+A T+A KEA+W++ L Sbjct: 1158 SDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRL 1217 Query: 369 VKDLGMIQRSVVVNCDSQSAIHLAKNQVYHARTKHIDIRYHKVREVVDNGLVQLLKVDTE 190 +++LG Q + V CDSQSA+H+A+N +H+RTKHI ++YH VREVV+ G V + K+ T Sbjct: 1218 MEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTN 1277 Query: 189 DNPADMLTKVVPKVKFERCLS 127 DN AD++TK + KF C S Sbjct: 1278 DNLADVMTKPINTDKFVWCRS 1298 >gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 1139 bits (2945), Expect = 0.0 Identities = 614/1341 (45%), Positives = 841/1341 (62%), Gaps = 18/1341 (1%) Frame = -3 Query: 4095 FDIIKFNGKNNFTSWQTDVKDILVSMKQIKAIKAKPATLPKDWTDEKWADLDLMACSTIR 3916 F+I KFNG+ F+ W+ ++ IL + AI +PA D TDEKW ++D A + + Sbjct: 5 FEIEKFNGRK-FSLWKLKIRAILRKDNCLDAIDGRPA----DITDEKWKEMDDNAVANLH 59 Query: 3915 LCLSRDITHNFSSETSAKVLWEKLEKLYLQKDLTSELYLKRRLHAFRMSPGKSMMDHINE 3736 L ++ + + + + +AK +W+ L KLY K L + ++LKRRL+ RM S+ DHIN Sbjct: 60 LAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINT 119 Query: 3735 FNKICSDLSNISVTISDTDKSMILLCSLPPSYDAFVDYLLSGKTDEGEDKDKLVFDDVVS 3556 N + S L+ I++ +++ +LL SLP SYD + + + D L FDDV Sbjct: 120 LNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNI-----ADTLHFDDVAG 174 Query: 3555 AL---QAKALRKQEFSDEAQ-------VEGLFVDXXXXXXXXXXXXXXXXXSDIECYYCR 3406 A+ +++ K+E S+ ++ G + ++I+CY C Sbjct: 175 AILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKNNIKCYGCG 234 Query: 3405 KPGHIRADCLKLKARDEKR-EKSDSKNVVASVAEGSEALEDPMCGFDEEVLTVTSKSYLN 3229 GH++ +C K EK E + S+ VAS ++ E L + E + + LN Sbjct: 235 MKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEIL------YSEAATSSEGERQLN 288 Query: 3228 DGWMLDSGASYHMCPSKDCFTTYREVNGGTVMMGNSNACKTVGVGTVQVRSH-GVITTLS 3052 D W++DSGA++HM P +D F +Y ++ G+V MGN +A + GVGT++++ H G + + Sbjct: 289 DVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348 Query: 3051 EVRHVPDLRKSLISLGVLESLGYKYAAEYGFLKVFYNGSLKMTGER-HGNLYFLRGDIVC 2875 VRHV L+K+L+S+G L+ LG K +E G LKV + M E+ NLY L GD + Sbjct: 349 GVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQ 408 Query: 2874 -GGAMVSQSIDEKQVESTRLWHMRLGHMSEKGMSVLSSKGLLGGEKTCKLDFCEHCIFGK 2698 A V+ + E E+T +WH RLGHMSE+G+ VL + LL G KT L FCEHC+ K Sbjct: 409 EADASVAAASQE---ETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISK 465 Query: 2697 QCRSSFGTAVHHTQGMLDYIHSDVWGPSRTVSKGGARWFVTFIDDFSRRVWLYTMKHKNE 2518 Q R F ++ +LD IHSDVW S +S GGAR+FV+FIDD+SRR+W+Y +K K++ Sbjct: 466 QHRLKFARVTTRSKHILDLIHSDVW-ESPKLSLGGARYFVSFIDDYSRRLWVYPIKKKSD 524 Query: 2517 VTEVFKKWKTMVEKQLGRVVKKIRSDNGGEYIEDPLKEFCEEQGIVRHFTVKGTPQQNGV 2338 V VFK +K +E + G+ +K +R+DNGGEY++ FC+++GIVR FTV TPQQNGV Sbjct: 525 VFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGV 584 Query: 2337 AERMNRTLLERARCMLSNASLDKIWWAEAVNTACYLVNRSPSTAIKCKSPMEVWTGNPVN 2158 AERMNRTLLER R ML A + K +WAEAV TACY++NRSPST I K+PME+W G PV+ Sbjct: 585 AERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVD 644 Query: 2157 YSNLRVFGCPAYFHVKED---KLGVRAKKAIFLGYPLGVKGYRLWCPELNKFIISRDVTF 1987 YS+L VFGCP Y KL +++K IFLGY VKGYRLW P K ++SRDV F Sbjct: 645 YSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVF 704 Query: 1986 NERAMLDSKKSTDWDSQIXXXXXXXXXXXSMQVEQRVPSSSTIXXXXXXXXXXXXXXXXX 1807 E + +K+ + +Q+E++ S + Sbjct: 705 AENELQSEQKNDSTFKETAI----------LQIEEKSKESDSSEAESVHEEQEPDDVNNG 754 Query: 1806 XXESTQQQIENIPSLTSQRERRPPTRYGFDEYASYALSVFEDEPFTFEEAMSTTHAIEWK 1627 ST+Q + PS S Y + +Y L E EP TF EA++ + A +W Sbjct: 755 VRRSTRQTQK--PSWQSD--------YVMTGHDAYCLIAEEGEPSTFHEALNGSDASQWM 804 Query: 1626 TAMDEEMKSLHKNHTWELVKLPKGRKKIGCKWVYTVK-DGIPDSKGIVSGVRYKARLVAK 1450 TA+ EEM++L KN TWELV+LPKGRK IG KWVY +K DG + RY+ARLV K Sbjct: 805 TAIHEEMEALRKNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVE------RYRARLVVK 858 Query: 1449 GYAQREGVDYNEVFSPVVKHTSIRVLLAFVAQFDLELEQLDVKTAFLHGNLEEDIYMSQP 1270 GYAQ+EG+D+NE+FSPVV+ T+IRV+LA A DL LEQLDVKTAFLHG LEE+IYM QP Sbjct: 859 GYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQP 918 Query: 1269 IGYEVAGKEDYVCRLQKSLYGLKQSPRQWYKRFDTFMLQQKYTRSKYDQCVYFKKFPGGS 1090 G++ GKE+ VCRL KSLYGLKQ+PR WYKRFD+F++ Y R D C Y+K+F G Sbjct: 919 EGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGND 978 Query: 1089 FVYLLLYVDDMLIAAKSKSEIDVLKKQLSLEFEMKDLGPAKKILGMEITRDRSKGKLCLT 910 F+ LLLYVDD+L+ +K + LK QL+ EF+MKDLGPA KILGM+I RDR K+ L+ Sbjct: 979 FIILLLYVDDILVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLS 1038 Query: 909 QKSYLEKVLRRFGMHNSKAISVPIPSTVKLSKQLCPTTTEEMEFMSKVPYANAVGSLMYA 730 QK+YL KVLRRF M + K IS P+P KLS + P+ E MS+VPYA+AVGSLMYA Sbjct: 1039 QKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYA 1098 Query: 729 MVCTRPDTAQAVGLVSRYMANPGRAHWYAVKGILRYLNGTLDIGLVFEKEQSLKVCGFVD 550 M+CTRPD AQAVG+VSR+MA+PG+ HW AVK I+RY+ GT + + F + L V G+VD Sbjct: 1099 MICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSE-LTVRGYVD 1157 Query: 549 SDYAGDRDKCRSTSGYCFTLSGAPISWRSMLQPIVALSTTEAEYIAVTEAVKEALWLRGL 370 SD+AGD DK +ST+GY FTL+G +SW S LQ +VALSTTEAEY+A T+A KEA+W++ L Sbjct: 1158 SDFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRL 1217 Query: 369 VKDLGMIQRSVVVNCDSQSAIHLAKNQVYHARTKHIDIRYHKVREVVDNGLVQLLKVDTE 190 +++LG Q + V CDSQSA+H+A+N +H+RTKHI ++YH VREVV+ G V + K+ T Sbjct: 1218 MEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTN 1277 Query: 189 DNPADMLTKVVPKVKFERCLS 127 DN AD++TK + KF C S Sbjct: 1278 DNLADVMTKPINADKFVWCRS 1298