BLASTX nr result

ID: Papaver22_contig00002361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00002361
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457240.1| hypothetical protein SORBIDRAFT_03g003900 [S...   152   7e-35
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...   151   1e-34
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...   151   1e-34
gb|AFK45150.1| unknown [Lotus japonicus]                              151   1e-34
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   151   1e-34

>ref|XP_002457240.1| hypothetical protein SORBIDRAFT_03g003900 [Sorghum bicolor]
           gi|241929215|gb|EES02360.1| hypothetical protein
           SORBIDRAFT_03g003900 [Sorghum bicolor]
          Length = 86

 Score =  152 bits (384), Expect = 7e-35
 Identities = 72/76 (94%), Positives = 75/76 (98%)
 Frame = +3

Query: 159 MASVPVNPKPFLNNLTGKTVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNL 338
           MA+VPVNPKPFLNNLTGKTV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNL
Sbjct: 1   MATVPVNPKPFLNNLTGKTVIVKLKWGMEYKGYLTSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 339 GEILIRCNNVLYLRGV 386
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score =  151 bits (382), Expect = 1e-34
 Identities = 72/76 (94%), Positives = 75/76 (98%)
 Frame = +3

Query: 159 MASVPVNPKPFLNNLTGKTVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNL 338
           MA+VPVNPKPFLNNLTGK V+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNL
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 339 GEILIRCNNVLYLRGV 386
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|50252055|dbj|BAD27986.1| putative small nuclear
           ribonucleoprotein polypeptide F [Oryza sativa Japonica
           Group] gi|113535599|dbj|BAF07982.1| Os02g0177500 [Oryza
           sativa Japonica Group]
          Length = 86

 Score =  151 bits (382), Expect = 1e-34
 Identities = 72/76 (94%), Positives = 75/76 (98%)
 Frame = +3

Query: 159 MASVPVNPKPFLNNLTGKTVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNL 338
           MA+VPVNPKPFLNNLTGK V+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNL
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 339 GEILIRCNNVLYLRGV 386
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  151 bits (381), Expect = 1e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 159 MASVPVNPKPFLNNLTGKTVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNL 338
           MA++PVNPKPFLNNLTGK V+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 339 GEILIRCNNVLYLRGV 386
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
          Length = 88

 Score =  151 bits (381), Expect = 1e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 159 MASVPVNPKPFLNNLTGKTVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNL 338
           MA++PVNPKPFLNNLTGK V+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 339 GEILIRCNNVLYLRGV 386
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


Top