BLASTX nr result

ID: Papaver22_contig00002346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00002346
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    84   2e-14
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    83   3e-14
ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...    82   4e-14
gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana]              78   1e-12
gb|AAF73380.1| MOM [Arabidopsis thaliana]                              78   1e-12

>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222837824|gb|EEE76189.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1996

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
 Frame = +1

Query: 1    QTGGTYSSDVSLPGELEMQSLDEELPHVFWEKLLNRTTPKWRYLPDASLSQRPRKRVQYF 180
            Q  G+Y++++ L GE ++Q LDEELPHVFWE+LL    P+W+Y   + L QR RKRVQYF
Sbjct: 747  QNQGSYTTNLPLHGEPKIQLLDEELPHVFWERLLKGKQPQWKY--SSGLFQRNRKRVQYF 804

Query: 181  EGSLEKTDFDYANVPKKRRTMVLPGTIDAGAQKPVVEDKREVGGVNKE------------ 324
            +   +  + +   V KKR+ + +  +     +   +E  R       E            
Sbjct: 805  DDIQKNPEVEADEVVKKRKKVAIDNSNSPSLKAAPIEYCRPNNARIAELLESTFTVSPIH 864

Query: 325  -GASGTPGGDCSQFLPSPKVPTGATRFRKANAVSS 426
             G SG P    SQF+PS    TG      AN VS+
Sbjct: 865  AGTSGAPVCSMSQFMPS---STGCLTTTDANHVSN 896


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 56/148 (37%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
 Frame = +1

Query: 1    QTGGTYSSDVSLPGELEMQSLDEELPHVFWEKLLNRTTPKWRYLPDASLSQRPRKRVQYF 180
            Q  G Y+++  L GE ++Q LDEELPH+FW+KLL    P+W+Y   + LSQR RKRVQY 
Sbjct: 1114 QNQGIYTTNFPLHGERKIQLLDEELPHIFWKKLLEGKQPRWKY--SSGLSQRNRKRVQYA 1171

Query: 181  EGSLEKTDFDYANVPKKRRTMVLPGTIDAGAQKPVVEDKREVGGVNKEGASGTPGGDCSQ 360
            +   + T  +   V KKR  +    T     +  ++            G SG P  + SQ
Sbjct: 1172 DDIQKNTVVEGDEVVKKRNKVANNSTNSPSLKAALI------------GTSGAPVLNMSQ 1219

Query: 361  FLPSP--KVPTGAT----RFRKANAVSS 426
            FLPS   ++ T AT     FR +N+ SS
Sbjct: 1220 FLPSSTGRLNTTATNHVSNFRHSNSNSS 1247


>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
 Frame = +1

Query: 13  TYSSDVSLPGELEMQSLDEELPHVFWEKLLNRTTPKWRYLPDASLSQRPRKRVQYFEGSL 192
           +Y  +V+L GELE+QS D+  PHVFW KLL    P+W+Y   +  SQR RKRVQYF+ S 
Sbjct: 535 SYCKNVTLHGELEIQSTDKVPPHVFWTKLLEGRYPQWKY--SSGPSQRNRKRVQYFDESS 592

Query: 193 EKTDFDYANVPKKRRTMVLPGTIDAGAQKPVVEDKREVGGVNKEGASGTPGGDCSQFLPS 372
           ++++ +   V KKRR +                DK ++   +KEGASG    + SQ L  
Sbjct: 593 KRSEHESDEVVKKRRKV----------------DKGKLVTGDKEGASGISANNESQSLSR 636

Query: 373 PKVPT-GATRFRKANAVSSIPADFIRESDKV-PVQQELEGEIREIHQS 510
           P   T  A    +A+    + +D    S ++  ++ E   ++R+  +S
Sbjct: 637 PTACTHDALHANRASTSPPLVSDISEASSEIHTIEFEGRRKLRDAQKS 684


>gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana]
          Length = 2254

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 62/190 (32%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
 Frame = +1

Query: 10   GTYSSDVSLPGELEMQSLDEELPHVFWEKLLNRTTPKWRYLPDASLSQRPRKRVQYFEGS 189
            GTYSSD +L GE  ++  DEE P++FW KLL    P W+Y  D    QR RKRVQYFEGS
Sbjct: 1021 GTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGKNPMWKYPSDT--PQRNRKRVQYFEGS 1078

Query: 190  LEKTDFDYANVPKKRRTMVLPGTIDAGAQKPVVEDKREVGGVNKEGASGTPGGDCSQFLP 369
                        KKR+      T       PV +D+R+  G +  GA  +P     Q   
Sbjct: 1079 EASPKTGDGGNAKKRKKASDDVTDPRVTDPPVDDDERKASGKDHMGALESPKVITLQSSC 1138

Query: 370  SPKVPTGAT-------RFRKANAVSSIPADFIRESD--KVPVQQELEGEIREIHQSCQKT 522
                  G          +   + +S IP D +   D  K+P + +     R +H     T
Sbjct: 1139 KSSGTDGTLDGNDAFGLYSMGSHISGIPEDMLASQDWGKIPDESQ-----RRLH-----T 1188

Query: 523  VLPPPSEPSC 552
            VL P     C
Sbjct: 1189 VLKPKMAKLC 1198


>gb|AAF73380.1| MOM [Arabidopsis thaliana]
          Length = 2001

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 62/190 (32%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
 Frame = +1

Query: 10   GTYSSDVSLPGELEMQSLDEELPHVFWEKLLNRTTPKWRYLPDASLSQRPRKRVQYFEGS 189
            GTYSSD +L GE  ++  DEE P++FW KLL    P W+Y  D    QR RKRVQYFEGS
Sbjct: 788  GTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGGKNPMWKYPSDT--PQRNRKRVQYFEGS 845

Query: 190  LEKTDFDYANVPKKRRTMVLPGTIDAGAQKPVVEDKREVGGVNKEGASGTPGGDCSQFLP 369
                        KKR+      T       PV +D+R+  G +  GA  +P     Q   
Sbjct: 846  EASPKTGDGGNAKKRKKASDDVTDPRVTDPPVDDDERKASGKDHMGALESPKVITLQSSC 905

Query: 370  SPKVPTGAT-------RFRKANAVSSIPADFIRESD--KVPVQQELEGEIREIHQSCQKT 522
                  G          +   + +S IP D +   D  K+P + +     R +H     T
Sbjct: 906  KSSGTDGTLDGNDAFGLYSMGSHISGIPEDMLASQDWGKIPDESQ-----RRLH-----T 955

Query: 523  VLPPPSEPSC 552
            VL P     C
Sbjct: 956  VLKPKMAKLC 965


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