BLASTX nr result

ID: Papaver22_contig00002078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00002078
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   108   1e-21
emb|CBI37645.3| unnamed protein product [Vitis vinifera]              108   1e-21
ref|XP_002306429.1| high mobility group family [Populus trichoca...   107   4e-21
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...   106   7e-21
gb|ABK94286.1| unknown [Populus trichocarpa]                          105   1e-20

>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  108 bits (270), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 6   QFKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKVEYNKTMDAYNKKLAGGS 185
           Q+KEKHP NKSVSVVGKAGGDKWKSLS+AEKAPYVAKAEKRK EYNK+M AYNK++A G 
Sbjct: 64  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEGP 123

Query: 186 NA 191
            A
Sbjct: 124 TA 125


>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  108 bits (270), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 6   QFKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKVEYNKTMDAYNKKLAGGS 185
           Q+KEKHP NKSVSVVGKAGGDKWKSLS+AEKAPYVAKAEKRK EYNK+M AYNK++A G 
Sbjct: 62  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEGP 121

Query: 186 NA 191
            A
Sbjct: 122 TA 123


>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score =  107 bits (266), Expect = 4e-21
 Identities = 49/61 (80%), Positives = 55/61 (90%)
 Frame = +3

Query: 6   QFKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKVEYNKTMDAYNKKLAGGS 185
           Q+KE HPNNKSV+ VGKAGGDKWKSLS+AEKAPY AKAEKRK EYNK M AYNK+LAGG+
Sbjct: 56  QYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGGN 115

Query: 186 N 188
           +
Sbjct: 116 D 116


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  106 bits (264), Expect = 7e-21
 Identities = 50/60 (83%), Positives = 55/60 (91%)
 Frame = +3

Query: 6   QFKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKVEYNKTMDAYNKKLAGGS 185
           Q+KEKHP+NKSVSVVGKAGGDKWKS+S+AEKAPYVAKAEKRKVEY K M AYNKK A G+
Sbjct: 61  QYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQAEGT 120


>gb|ABK94286.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  105 bits (262), Expect = 1e-20
 Identities = 48/61 (78%), Positives = 55/61 (90%)
 Frame = +3

Query: 6   QFKEKHPNNKSVSVVGKAGGDKWKSLSDAEKAPYVAKAEKRKVEYNKTMDAYNKKLAGGS 185
           Q+KE HPNNKSV+ VGKAGGDKWKSLS+AEKAP+ AKAEKRK EYNK M AYNK+LAGG+
Sbjct: 56  QYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGGN 115

Query: 186 N 188
           +
Sbjct: 116 D 116


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