BLASTX nr result

ID: Papaver22_contig00002059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00002059
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285261.1| PREDICTED: transcription elongation factor 1...   172   5e-41
ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002522506.1| Transcription elongation factor, putative [R...   169   4e-40
ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK...   169   4e-40

>ref|XP_002285261.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
           [Vitis vinifera] gi|225461578|ref|XP_002285263.1|
           PREDICTED: transcription elongation factor 1 homolog
           isoform 2 [Vitis vinifera] gi|302142940|emb|CBI20235.3|
           unnamed protein product [Vitis vinifera]
          Length = 92

 Score =  172 bits (436), Expect = 5e-41
 Identities = 80/91 (87%), Positives = 85/91 (93%)
 Frame = +1

Query: 115 MGKRKSRAKPETKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICGICQESFSMTI 294
           MGKRKSRAKP  KKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA+C ICQESFSMT+
Sbjct: 1   MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCRICQESFSMTV 60

Query: 295 NALSEPIDVYSEWIDECERVNNVEDD*AKGE 387
           NALSEPIDVYSEWIDECERVN +++D AK E
Sbjct: 61  NALSEPIDVYSEWIDECERVNTLDEDAAKDE 91


>ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|222847664|gb|EEE85211.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  170 bits (431), Expect = 2e-40
 Identities = 77/86 (89%), Positives = 83/86 (96%)
 Frame = +1

Query: 115 MGKRKSRAKPETKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICGICQESFSMTI 294
           MGKRKSRAKP  KKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA+CGICQE+FSMTI
Sbjct: 1   MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQENFSMTI 60

Query: 295 NALSEPIDVYSEWIDECERVNNVEDD 372
            AL+EPID+YSEWIDECERVN++EDD
Sbjct: 61  TALTEPIDIYSEWIDECERVNSLEDD 86


>ref|XP_002522506.1| Transcription elongation factor, putative [Ricinus communis]
           gi|223538197|gb|EEF39806.1| Transcription elongation
           factor, putative [Ricinus communis]
          Length = 88

 Score =  169 bits (428), Expect = 4e-40
 Identities = 78/86 (90%), Positives = 81/86 (94%)
 Frame = +1

Query: 115 MGKRKSRAKPETKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICGICQESFSMTI 294
           MGKRKSRAKP  KKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA+C ICQESFS TI
Sbjct: 1   MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCAICQESFSTTI 60

Query: 295 NALSEPIDVYSEWIDECERVNNVEDD 372
            AL+EPIDVYSEWIDECERVNNV+DD
Sbjct: 61  TALTEPIDVYSEWIDECERVNNVDDD 86


>ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  169 bits (428), Expect = 4e-40
 Identities = 77/86 (89%), Positives = 82/86 (95%)
 Frame = +1

Query: 115 MGKRKSRAKPETKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICGICQESFSMTI 294
           MGKRKS AKP  KKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA+CGICQESFSMTI
Sbjct: 70  MGKRKSTAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTI 129

Query: 295 NALSEPIDVYSEWIDECERVNNVEDD 372
            AL+EPID+YSEWIDECERVN++EDD
Sbjct: 130 TALTEPIDIYSEWIDECERVNSLEDD 155


>gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK96677.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 88

 Score =  169 bits (428), Expect = 4e-40
 Identities = 77/86 (89%), Positives = 82/86 (95%)
 Frame = +1

Query: 115 MGKRKSRAKPETKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAICGICQESFSMTI 294
           MGKRKS AKP  KKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEA+CGICQESFSMTI
Sbjct: 1   MGKRKSTAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTI 60

Query: 295 NALSEPIDVYSEWIDECERVNNVEDD 372
            AL+EPID+YSEWIDECERVN++EDD
Sbjct: 61  TALTEPIDIYSEWIDECERVNSLEDD 86


Top