BLASTX nr result

ID: Papaver22_contig00001237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00001237
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246...   144   7e-35
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...   146   8e-33
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...   138   2e-30
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213...   138   2e-30
gb|AFK45778.1| unknown [Medicago truncatula]                          138   2e-30

>ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246461 isoform 1 [Vitis
           vinifera] gi|359495604|ref|XP_003635035.1| PREDICTED:
           uncharacterized protein LOC100246461 isoform 2 [Vitis
           vinifera] gi|297736694|emb|CBI25730.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  144 bits (362), Expect(2) = 7e-35
 Identities = 68/135 (50%), Positives = 98/135 (72%)
 Frame = -1

Query: 806 SSAPKLPVVVQLEIEKDLPKNAKCMMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKAL 627
           S+ PK P  ++L IE++LPKNAKCMMDC A   L+GIQ+Q+ +LS DPTIK+PL+FNK L
Sbjct: 90  SAVPKPPAPLELRIEQELPKNAKCMMDCEAALILKGIQEQMVVLSEDPTIKIPLSFNKGL 149

Query: 626 EYAKGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTT 447
           +YA+ S+ Y++P +V   LE L    +++ E+C+I+N CP+T+DEV+AL+PSLK    T 
Sbjct: 150 QYAQSSNCYASPQSVRLVLEPLSKYGVSDGEICVIANTCPETIDEVFALVPSLKPKWSTL 209

Query: 446 EGAIKNLLYELDNLK 402
              +K++L  L  LK
Sbjct: 210 REPLKDVLRGLAELK 224



 Score = 30.8 bits (68), Expect(2) = 7e-35
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = -2

Query: 1063 MAEKGGGGFGFTPSTAKKSSFKQPVAKSAVG-----GSSKKHKTVQFDTSSESE 917
            M EKGG GF    S   KSS K P+  S  G       SK+ + VQF+     E
Sbjct: 1    MGEKGGKGFSLN-SNLGKSSTKSPLEASLTGKDDSAAKSKRGRKVQFNNGGLPE 53


>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  146 bits (369), Expect = 8e-33
 Identities = 69/134 (51%), Positives = 102/134 (76%)
 Frame = -1

Query: 803 SAPKLPVVVQLEIEKDLPKNAKCMMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKALE 624
           S+ K P  ++L+IE+DLPKNAKC+MDC A   LQGIQ+Q+ +LSRDPTIKLP++F++AL+
Sbjct: 67  SSTKEPQPLELKIEQDLPKNAKCLMDCEAAQVLQGIQEQMVLLSRDPTIKLPVSFDRALQ 126

Query: 623 YAKGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTTE 444
           +A+  +R++NP +V   LE L+   ++E E+C I+NVCPD VDEV+AL+PSLK+ +    
Sbjct: 127 HARTGARFTNPQSVRRILEGLKKHGVSEGEICTIANVCPDGVDEVFALVPSLKSKKNVLR 186

Query: 443 GAIKNLLYELDNLK 402
             +K++L +L  LK
Sbjct: 187 EPLKDILGQLSELK 200


>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score =  138 bits (348), Expect = 2e-30
 Identities = 70/138 (50%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
 Frame = -1

Query: 806 SSAPKLPVVVQLEIEKDLPKNAKC--MMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNK 633
           +S  K P  ++L+IE++LPKN KC  +MDC A   LQGIQDQ+  LS DPTIK+P +F++
Sbjct: 82  ASIAKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDR 141

Query: 632 ALEYAKGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRL 453
            L+YAK ++ Y N  +V   LE L+   +T+SE+C+I+NVCPDT DEV+AL+PSLK  R 
Sbjct: 142 GLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRS 201

Query: 452 TTEGAIKNLLYELDNLKS 399
                I N+L EL  +KS
Sbjct: 202 KLSEPINNVLSELAKVKS 219


>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
          Length = 242

 Score =  138 bits (348), Expect = 2e-30
 Identities = 70/138 (50%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
 Frame = -1

Query: 806 SSAPKLPVVVQLEIEKDLPKNAKC--MMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNK 633
           +S  K P  ++L+IE++LPKN KC  +MDC A   LQGIQDQ+  LS DPTIK+P +F++
Sbjct: 82  ASIAKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDR 141

Query: 632 ALEYAKGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRL 453
            L+YAK ++ Y N  +V   LE L+   +T+SE+C+I+NVCPDT DEV+AL+PSLK  R 
Sbjct: 142 GLQYAKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRS 201

Query: 452 TTEGAIKNLLYELDNLKS 399
                I N+L EL  +KS
Sbjct: 202 KLSEPINNVLSELAKVKS 219


>gb|AFK45778.1| unknown [Medicago truncatula]
          Length = 201

 Score =  138 bits (348), Expect = 2e-30
 Identities = 71/137 (51%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
 Frame = -1

Query: 806 SSAPKLPVVVQLEIEKDLPKNAKCMMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKAL 627
           SSA K P   +  ++++LP+N KC+MDC A   LQGIQDQ+  LSRDP+IK+P +F+K L
Sbjct: 62  SSAAKDPHQFEHRVDQELPENFKCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGL 121

Query: 626 EYAK--GSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRL 453
            YAK   SS+YSNP +V H LE L    +TESE+C+I+NVCP+T DEV+AL+PSLK+ R 
Sbjct: 122 YYAKSSSSSKYSNPESVRHTLEPLMNHDLTESEICVIANVCPETADEVFALLPSLKSKRG 181

Query: 452 TTEGAIKNLLYELDNLK 402
                ++  L EL   K
Sbjct: 182 INSQPVEEALSELAKFK 198


Top