BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00001209
         (1879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   467   e-129
ref|XP_002313865.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   458   e-126
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   458   e-126
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...   452   e-124

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  467 bits (1202), Expect = e-129
 Identities = 227/278 (81%), Positives = 256/278 (92%)
 Frame = +1

Query: 1045 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 1224
            MEG SYQRFP+IKIRE+KD+Y KFELR+TD SMANALRR+MIAEVPT+AI+LVEIEVNS+
Sbjct: 1    MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1225 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 1404
            VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQC+YCSVEFHL  +C  DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 1405 TSADLLTADPNVIPVDVANAARSTSFDSSENKGIIIVKLRRGQELRLRAIARKGIGKDHA 1584
            TS DL ++D  V+PVD ++   S+ +DSSE +GIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLYSSDHTVVPVDFSD---SSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHA 177

Query: 1585 KWSPTATVTFMYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVIVVDPEAY 1764
            KWSP ATVTFMYEPDIHINED+M +L+LEEKQSWVESSPTKVFDIDPNTQQV+VVDPEAY
Sbjct: 178  KWSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAY 237

Query: 1765 TYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAV 1878
            TYD+EVIKKAE+MGKPGLV I A+EDSFIFTVESTGA+
Sbjct: 238  TYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAI 275


>ref|XP_002313865.1| predicted protein [Populus trichocarpa] gi|222850273|gb|EEE87820.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  458 bits (1179), Expect = e-126
 Identities = 230/280 (82%), Positives = 254/280 (90%), Gaps = 2/280 (0%)
 Frame = +1

Query: 1045 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 1224
            ME +SYQRFPKIKIREMKD+YLKFELRETD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1    MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1225 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 1404
            VLNDEF+AHRLGLIPLTS++AMGMRFSRDCDACDGDGQCEYCSVEFHL  +C  DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 1405 TSADLLTADPNVIPVDVANAARSTS-FDSSE-NKGIIIVKLRRGQELRLRAIARKGIGKD 1578
            TS DL ++D  VIPVD ++ + +   FD +E  +GIIIVKLRRGQELRLRAIARKGIGKD
Sbjct: 121  TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180

Query: 1579 HAKWSPTATVTFMYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVIVVDPE 1758
            HAKWSP ATVTFMYEP+IHINED+M TLTLEEK SW+ESSPTKVFDID  TQQV+VVDPE
Sbjct: 181  HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE 240

Query: 1759 AYTYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAV 1878
            AYTYDDEVIKKAEAMGK GL++I A+EDSFIFTVESTGAV
Sbjct: 241  AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAV 280


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
            vinifera]
          Length = 318

 Score =  458 bits (1179), Expect = e-126
 Identities = 223/278 (80%), Positives = 255/278 (91%)
 Frame = +1

Query: 1045 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 1224
            MEG+SYQRFPKIKIRE+KD+Y KFELRETD SMANALRR+MIAEVPT+AI+LVEIEVNS+
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1225 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 1404
            VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 1405 TSADLLTADPNVIPVDVANAARSTSFDSSENKGIIIVKLRRGQELRLRAIARKGIGKDHA 1584
            TS DL+++D  V+PVD ++   S+ +DS++ KGIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLISSDHTVVPVDFSD---SSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHA 177

Query: 1585 KWSPTATVTFMYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVIVVDPEAY 1764
            KWSP ATVTFMYEP+IHINED+M +LTLEEK SWVESSPTKVFDID ++QQV+V D EAY
Sbjct: 178  KWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAY 237

Query: 1765 TYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAV 1878
            TYDDEV+KKAEAMGKPGLVEI A+EDSFIFTVESTGA+
Sbjct: 238  TYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAI 275


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  458 bits (1179), Expect = e-126
 Identities = 223/278 (80%), Positives = 255/278 (91%)
 Frame = +1

Query: 1045 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 1224
            MEG+SYQRFPKIKIRE+KD+Y KFELRETD SMANALRR+MIAEVPT+AI+LVEIEVNS+
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1225 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 1404
            VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 1405 TSADLLTADPNVIPVDVANAARSTSFDSSENKGIIIVKLRRGQELRLRAIARKGIGKDHA 1584
            TS DL+++D  V+PVD ++   S+ +DS++ KGIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLISSDHTVVPVDFSD---SSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHA 177

Query: 1585 KWSPTATVTFMYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVIVVDPEAY 1764
            KWSP ATVTFMYEP+IHINED+M +LTLEEK SWVESSPTKVFDID ++QQV+V D EAY
Sbjct: 178  KWSPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAY 237

Query: 1765 TYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAV 1878
            TYDDEV+KKAEAMGKPGLVEI A+EDSFIFTVESTGA+
Sbjct: 238  TYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAI 275


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Cucumis sativus]
          Length = 320

 Score =  452 bits (1162), Expect = e-124
 Identities = 220/278 (79%), Positives = 252/278 (90%)
 Frame = +1

Query: 1045 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 1224
            MEG SYQRFPK+KIRE++D+Y KFELR+TD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1    MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1225 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 1404
            VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 1405 TSADLLTADPNVIPVDVANAARSTSFDSSENKGIIIVKLRRGQELRLRAIARKGIGKDHA 1584
            TS DL ++D  V+PVD +++A +T  ++ + KGIIIVKLRRGQELRLRAIARKGIGKDHA
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSAAATG-EALDTKGIIIVKLRRGQELRLRAIARKGIGKDHA 179

Query: 1585 KWSPTATVTFMYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVIVVDPEAY 1764
            KWSP ATVTFMYEP IHINED+M TLTLEEK++WVES PT+VF++D  T QV+VVDPEAY
Sbjct: 180  KWSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAY 239

Query: 1765 TYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAV 1878
            TYDDEVIKKAEAMGK GLV+ITAREDSFIFTVESTGA+
Sbjct: 240  TYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAI 277