BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00001195
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   152   3e-35
gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein ...   152   3e-35
emb|CAA48410.1| light harvesting chlorophyll a /b binding protei...   152   3e-35
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      151   7e-35
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   151   7e-35

>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 182
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV
Sbjct: 153 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 212

Query: 183 KELKNGRLAMFSMFG 227
           KELKNGRLAMFSMFG
Sbjct: 213 KELKNGRLAMFSMFG 227



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +2

Query: 350 IVTGKGPLENLADHLADPVNNNAWSYATNFAPGK 451
           IVTGKGPLENLAD LADPVNNNAW+YATNF PGK
Sbjct: 233 IVTGKGPLENLADPLADPVNNNAWAYATNFVPGK 266


>gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
           sativum]
          Length = 266

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 182
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV
Sbjct: 153 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 212

Query: 183 KELKNGRLAMFSMFG 227
           KELKNGRLAMFSMFG
Sbjct: 213 KELKNGRLAMFSMFG 227



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +2

Query: 350 IVTGKGPLENLADHLADPVNNNAWSYATNFAPGK 451
           IVTGKGPLENLADHL+DPVNNNAWSYATNF PGK
Sbjct: 233 IVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266


>emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
          Length = 193

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 182
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV
Sbjct: 80  VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 139

Query: 183 KELKNGRLAMFSMFG 227
           KELKNGRLAMFSMFG
Sbjct: 140 KELKNGRLAMFSMFG 154



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +2

Query: 350 IVTGKGPLENLADHLADPVNNNAWSYATNFAPGK 451
           IVTGKGPLENLADHLADPVNNNAW+YATNF PGK
Sbjct: 160 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 193


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  151 bits (381), Expect = 7e-35
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 182
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKV
Sbjct: 153 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 212

Query: 183 KELKNGRLAMFSMFG 227
           KELKNGRLAMFSMFG
Sbjct: 213 KELKNGRLAMFSMFG 227



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +2

Query: 350 IVTGKGPLENLADHLADPVNNNAWSYATNFAPGK 451
           IVTGKGPLENLADHLADPVNNNAW+YATNF PGK
Sbjct: 233 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  151 bits (381), Expect = 7e-35
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +3

Query: 3   VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 182
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKV
Sbjct: 119 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 178

Query: 183 KELKNGRLAMFSMFG 227
           KELKNGRLAMFSMFG
Sbjct: 179 KELKNGRLAMFSMFG 193



 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +2

Query: 350 IVTGKGPLENLADHLADPVNNNAWSYATNFAPGK 451
           IVTGKGPLENLADHLADPVNNNAWSYATNF PGK
Sbjct: 199 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232