BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00001034
         (1263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   178   5e-60
ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|2...   176   8e-59
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   177   3e-57
ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabi...   176   1e-56
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri...   174   1e-55

>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  178 bits (451), Expect(2) = 5e-60
 Identities = 88/102 (86%), Positives = 96/102 (94%)
 Frame = +2

Query: 323 YVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLEVFQE 502
           YVFFPEE KVGVKTMKTYTNRMK++ V RA+LVVQQNLTPFARTCI+EIS+KFHLEVFQE
Sbjct: 69  YVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQE 128

Query: 503 AELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQVLNMQ 628
           AELLVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQ+  +Q
Sbjct: 129 AELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQ 170



 Score = 80.9 bits (198), Expect(2) = 5e-60
 Identities = 35/52 (67%), Positives = 47/52 (90%)
 Frame = +3

Query: 69  ATDEDITRLYRVRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDL 224
           A++E+I+RL+R+R+TVMQML DRGY VGDFE+  T+ QF+SKFG+N+KREDL
Sbjct: 3   ASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDL 54


>ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|222873254|gb|EEF10385.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  176 bits (446), Expect(2) = 8e-59
 Identities = 87/102 (85%), Positives = 96/102 (94%)
 Frame = +2

Query: 323 YVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLEVFQE 502
           YVFFPEE KVGVKTMKTYTNRMK++ V RA+LVVQQNLTPFARTCI+EIS+KFHLEVFQE
Sbjct: 69  YVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQE 128

Query: 503 AELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQVLNMQ 628
           AELLVNIKEHVLVPEHQVL+ EEKKTLLERYT+KETQ+  +Q
Sbjct: 129 AELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQ 170



 Score = 79.0 bits (193), Expect(2) = 8e-59
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = +3

Query: 72  TDEDITRLYRVRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDL 224
           T+E+I RL R+R+TVMQML DRGY VGDFE+K TR QF SK+G+N+KREDL
Sbjct: 4   TEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDL 54


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  177 bits (448), Expect(2) = 3e-57
 Identities = 86/102 (84%), Positives = 96/102 (94%)
 Frame = +2

Query: 323 YVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLEVFQE 502
           Y+FFP+E KVGVKTMK YTNRMK++ V+RA+LVVQQNLTPFARTCISEISSKFHLEVFQE
Sbjct: 68  YIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQE 127

Query: 503 AELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQVLNMQ 628
           AE+LVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQ+  +Q
Sbjct: 128 AEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQ 169



 Score = 72.8 bits (177), Expect(2) = 3e-57
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +3

Query: 66  MATDEDITRLYRVRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDL 224
           M T+E+I RLYR+++T+MQML DRGY + D EL  T+ QF+ K GDN+KREDL
Sbjct: 1   MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDL 53


>ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana]
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           II subunit E [Arabidopsis thaliana]
          Length = 205

 Score =  176 bits (445), Expect(2) = 1e-56
 Identities = 86/102 (84%), Positives = 95/102 (93%)
 Frame = +2

Query: 323 YVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLEVFQE 502
           Y+FFP+E KVGVKTMK YTNRMK++ V RA+LVVQQNLTPFARTCISEISSKFHLEVFQE
Sbjct: 68  YIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQE 127

Query: 503 AELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQVLNMQ 628
           AE+LVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQ+  +Q
Sbjct: 128 AEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQ 169



 Score = 72.0 bits (175), Expect(2) = 1e-56
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +3

Query: 66  MATDEDITRLYRVRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDL 224
           M T+E++ RLYR+++T+MQML DRGY + D EL  T+ QF+ K GDN+KREDL
Sbjct: 1   MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDL 53


>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 225

 Score =  174 bits (442), Expect(2) = 1e-55
 Identities = 86/102 (84%), Positives = 96/102 (94%)
 Frame = +2

Query: 323 YVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLEVFQE 502
           YVFFPEE KVGVKTMKTYTNRMK++ V RA+LVVQQ+LTPFARTCI+EI+SKFHLEVFQE
Sbjct: 88  YVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQSLTPFARTCIAEIASKFHLEVFQE 147

Query: 503 AELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQVLNMQ 628
           +ELLVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQ+  +Q
Sbjct: 148 SELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQ 189



 Score = 70.1 bits (170), Expect(2) = 1e-55
 Identities = 32/51 (62%), Positives = 42/51 (82%)
 Frame = +3

Query: 72  TDEDITRLYRVRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDL 224
           ++++I RL+R+RRTVMQML DR YLV D E+  T+ QF SK+GDN+KREDL
Sbjct: 4   SEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDL 54