BLASTX nr result
ID: Papaver22_contig00000625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00000625
(2945 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera... 445 e-122
ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago tr... 443 e-121
ref|NP_851080.1| serine hydroxymethyltransferase 2 [Arabidopsis ... 443 e-121
gb|AAK59622.1| putative glycine hydroxymethyltransferase [Arabid... 443 e-121
ref|XP_002302357.1| precursor of transferase serine hydroxymethy... 440 e-121
>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
Short=SHMT; AltName: Full=Glycine
hydroxymethyltransferase; AltName: Full=Serine methylase;
Flags: Precursor gi|169158|gb|AAA33687.1| serine
hydroxymethyltransferase [Pisum sativum]
Length = 518
Score = 445 bits (1145), Expect = e-122
Identities = 221/237 (93%), Positives = 230/237 (97%)
Frame = +1
Query: 2233 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDY 2412
GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAY+R YDY
Sbjct: 182 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 241
Query: 2413 ARIRQVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRK 2592
ARIR+VCDKQKA+LLADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIF+RK
Sbjct: 242 ARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK 301
Query: 2593 GLKEVNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 2772
GLKEVNKQGKEV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEY+AYQEQVL
Sbjct: 302 GLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVL 361
Query: 2773 KNCSQFAKTLNALGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVMELVHIAANKNTV 2943
N S+FAK L+ GYDLVSGGTENHLVLVNLKNKGIDGSRVEKV+ELVHIAANKNTV
Sbjct: 362 SNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTV 418
Score = 176 bits (447), Expect(2) = 3e-50
Identities = 83/88 (94%), Positives = 87/88 (98%)
Frame = +3
Query: 1848 QWKGLELIPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 2027
QWKGLELIPSENFTS+SVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA
Sbjct: 74 QWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 133
Query: 2028 FRLDPAKWGVNVQSLSGSPANFQVYTAL 2111
FRLDPAKWGVNVQ LSGSP+NFQVYTAL
Sbjct: 134 FRLDPAKWGVNVQPLSGSPSNFQVYTAL 161
Score = 51.6 bits (122), Expect(2) = 3e-50
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +1
Query: 1621 MAMAMALRRLSSSSINKPIRPLFNADSYYCMSSLPSEAVDD 1743
MAMAMALR+LSSS +NK RPLF+A S Y SSLP EAV D
Sbjct: 1 MAMAMALRKLSSS-VNKSSRPLFSASSLYYKSSLPDEAVYD 40
>ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|163889372|gb|ABY48142.1|
serine-hydroxymethyltransferase [Medicago truncatula]
gi|355514289|gb|AES95912.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 518
Score = 443 bits (1140), Expect = e-121
Identities = 218/237 (91%), Positives = 230/237 (97%)
Frame = +1
Query: 2233 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDY 2412
GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAY+R YDY
Sbjct: 182 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 241
Query: 2413 ARIRQVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRK 2592
ARIR+VCDKQKA++LADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIF+RK
Sbjct: 242 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK 301
Query: 2593 GLKEVNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 2772
GLKEVNKQGKEV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL
Sbjct: 302 GLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 361
Query: 2773 KNCSQFAKTLNALGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVMELVHIAANKNTV 2943
NC++FA+ L+ GY+LVSGGTENHLVLVNLKNKGIDGSRVEKV+E VHIAANKNTV
Sbjct: 362 SNCAKFAQALSEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV 418
Score = 175 bits (443), Expect(2) = 3e-50
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +3
Query: 1848 QWKGLELIPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 2027
QWKGLELIPSENFTS+SVM+AVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA
Sbjct: 74 QWKGLELIPSENFTSLSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 133
Query: 2028 FRLDPAKWGVNVQSLSGSPANFQVYTAL 2111
FRLDPAKWGVNVQ LSGSP+NF VYTAL
Sbjct: 134 FRLDPAKWGVNVQPLSGSPSNFHVYTAL 161
Score = 53.1 bits (126), Expect(2) = 3e-50
Identities = 31/41 (75%), Positives = 32/41 (78%)
Frame = +1
Query: 1621 MAMAMALRRLSSSSINKPIRPLFNADSYYCMSSLPSEAVDD 1743
MAMAMALRRLSSS INK RPLF+A S Y SSLP EAV D
Sbjct: 1 MAMAMALRRLSSS-INKSSRPLFSASSVYYKSSLPDEAVYD 40
>ref|NP_851080.1| serine hydroxymethyltransferase 2 [Arabidopsis thaliana]
gi|227202628|dbj|BAH56787.1| AT5G26780 [Arabidopsis
thaliana] gi|332006219|gb|AED93602.1| serine
hydroxymethyltransferase 2 [Arabidopsis thaliana]
Length = 517
Score = 443 bits (1139), Expect = e-121
Identities = 217/237 (91%), Positives = 232/237 (97%)
Frame = +1
Query: 2233 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDY 2412
GYQTDTKKISAVSIFFETMPYRLDE+TGYIDYDQLEKSA LFRPKLIVAGASAY+R YDY
Sbjct: 181 GYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDY 240
Query: 2413 ARIRQVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRK 2592
ARIR+VC+KQKA++LADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RK
Sbjct: 241 ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 300
Query: 2593 GLKEVNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 2772
GLKE+NKQGKEVMYDYED+INQAVFPGLQGGPHNHTITGLAVALKQA TPEYKAYQ+QVL
Sbjct: 301 GLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVL 360
Query: 2773 KNCSQFAKTLNALGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVMELVHIAANKNTV 2943
+NCS+FA+TL A GYDLVSGGT+NHLVLVNLKNKGIDGSRVEKV+ELVHIAANKNTV
Sbjct: 361 RNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTV 417
Score = 175 bits (444), Expect(2) = 1e-43
Identities = 82/88 (93%), Positives = 87/88 (98%)
Frame = +3
Query: 1848 QWKGLELIPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 2027
QWKG ELIPSENFTS+SVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA
Sbjct: 73 QWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 132
Query: 2028 FRLDPAKWGVNVQSLSGSPANFQVYTAL 2111
F+LDP+KWGVNVQSLSGSPANFQVYTAL
Sbjct: 133 FQLDPSKWGVNVQSLSGSPANFQVYTAL 160
Score = 30.4 bits (67), Expect(2) = 1e-43
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 1627 MAMALRRLSSSSINKPIRPL-FNADSYYCMSSLPSEAVDDS 1746
MA+ALRRL SSS+ KPI L N S MSSL + A+ +S
Sbjct: 1 MALALRRL-SSSVKKPISLLSSNGGSLRFMSSLSTAAMAES 40
>gb|AAK59622.1| putative glycine hydroxymethyltransferase [Arabidopsis thaliana]
Length = 517
Score = 443 bits (1139), Expect = e-121
Identities = 217/237 (91%), Positives = 232/237 (97%)
Frame = +1
Query: 2233 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDY 2412
GYQTDTKKISAVSIFFETMPYRLDE+TGYIDYDQLEKSA LFRPKLIVAGASAY+R YDY
Sbjct: 181 GYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDY 240
Query: 2413 ARIRQVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRK 2592
ARIR+VC+KQKA++LADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RK
Sbjct: 241 ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 300
Query: 2593 GLKEVNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 2772
GLKE+NKQGKEVMYDYED+INQAVFPGLQGGPHNHTITGLAVALKQA TPEYKAYQ+QVL
Sbjct: 301 GLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVL 360
Query: 2773 KNCSQFAKTLNALGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVMELVHIAANKNTV 2943
+NCS+FA+TL A GYDLVSGGT+NHLVLVNLKNKGIDGSRVEKV+ELVHIAANKNTV
Sbjct: 361 RNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTV 417
Score = 175 bits (444), Expect(2) = 1e-43
Identities = 82/88 (93%), Positives = 87/88 (98%)
Frame = +3
Query: 1848 QWKGLELIPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 2027
QWKG ELIPSENFTS+SVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA
Sbjct: 73 QWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 132
Query: 2028 FRLDPAKWGVNVQSLSGSPANFQVYTAL 2111
F+LDP+KWGVNVQSLSGSPANFQVYTAL
Sbjct: 133 FQLDPSKWGVNVQSLSGSPANFQVYTAL 160
Score = 30.4 bits (67), Expect(2) = 1e-43
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 1627 MAMALRRLSSSSINKPIRPL-FNADSYYCMSSLPSEAVDDS 1746
MA+ALRRL SSS+ KPI L N S MSSL + A+ +S
Sbjct: 1 MALALRRL-SSSVKKPISLLSSNGGSLRFMSSLSTAAMAES 40
>ref|XP_002302357.1| precursor of transferase serine hydroxymethyltransferase 3 [Populus
trichocarpa] gi|222844083|gb|EEE81630.1| precursor of
transferase serine hydroxymethyltransferase 3 [Populus
trichocarpa]
Length = 516
Score = 440 bits (1132), Expect = e-121
Identities = 216/237 (91%), Positives = 231/237 (97%)
Frame = +1
Query: 2233 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDY 2412
GYQTDTKKISAVSIFFETMPYRL+ESTGY+DYDQLEKSATLFRPKLIVAGASAY+R YDY
Sbjct: 181 GYQTDTKKISAVSIFFETMPYRLNESTGYVDYDQLEKSATLFRPKLIVAGASAYARLYDY 240
Query: 2413 ARIRQVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRK 2592
ARIR+VCDKQKA+LLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RK
Sbjct: 241 ARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 300
Query: 2593 GLKEVNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL 2772
G+KE+NKQGKEVMYDYEDKINQAVFPGLQGGPHNHTI+GLAVALKQA TPEYKAYQEQVL
Sbjct: 301 GVKEINKQGKEVMYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQARTPEYKAYQEQVL 360
Query: 2773 KNCSQFAKTLNALGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVMELVHIAANKNTV 2943
NCS+FA++L GY+LVSGGTENHLVLVNL+NKGIDGSRVEKV+ELVHIAANKNTV
Sbjct: 361 SNCSKFAQSLIEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLELVHIAANKNTV 417
Score = 176 bits (446), Expect(2) = 4e-47
Identities = 84/88 (95%), Positives = 86/88 (97%)
Frame = +3
Query: 1848 QWKGLELIPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 2027
QWKGLELIPSENFTSVSVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA
Sbjct: 73 QWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEA 132
Query: 2028 FRLDPAKWGVNVQSLSGSPANFQVYTAL 2111
F LDP KWGVNVQSLSGSPANFQVYTAL
Sbjct: 133 FGLDPQKWGVNVQSLSGSPANFQVYTAL 160
Score = 41.2 bits (95), Expect(2) = 4e-47
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 1627 MAMALRRLSSSSINKPIRPLFNADS-YYCMSSLPSEAVDD 1743
MA+ALRRL SSS+ PI+P N S YY MSSLP +A+ D
Sbjct: 1 MAIALRRL-SSSLRNPIKPYLNGGSLYYNMSSLPHKALPD 39