BLASTX nr result

ID: Papaver22_contig00000410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000410
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   260   3e-67
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   260   3e-67
ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arab...   260   3e-67
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              260   3e-67

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  263 bits (673), Expect = 3e-68
 Identities = 134/283 (47%), Positives = 182/283 (64%), Gaps = 7/283 (2%)
 Frame = +3

Query: 108  NSLDEEPQFEIKSFSTGTYLAFEVLDVPSEMVTNGDPCQPILVGGINPTEQS-GYLQAKL 284
            N LDEE + EI+ F TGTYL  E+ DVP EMV + DPC PILVGGI   E+  GY+QA+L
Sbjct: 764  NDLDEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARL 823

Query: 285  ERHSWHMNSLKSNDPIVVSVGWRRYQTLPIYT-RDHGGRRRMLQYTPENESCVATFWGPL 461
            +RH WH   LK+ DP++ S+GWRRYQT P+Y   D  GR RML+YTPE+  C+ATFWGPL
Sbjct: 824  KRHRWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPL 883

Query: 462  ASSGAGVAVLRSSADNKAAFQILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGL 638
            A    GV  +++ A+N+A+F+I ATAVVL++ HA ++ KK+K  G P  I K+TALI  +
Sbjct: 884  APPNTGVVAVQNLANNQASFRITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNM 943

Query: 639  FTSDDEVDLFRKFKIKTEDGTRGMVLEAAKPDF----SELNSPPGEGIAKCTFDSMIHMG 806
            FTSD EV  F    ++T  G RG V +AAK +     ++    P EGIA+CTF+  I M 
Sbjct: 944  FTSDLEVARFEGAAVRTVSGIRGQVKKAAKDEIGNQPTKKGGAPREGIARCTFEDRILMS 1003

Query: 807  SIIVMSEWIEIEVPRISNQPMAVLEPSKSVRQSMDSIVETQKK 935
             I+ +  W ++E P   N     L+P     Q M ++ E +++
Sbjct: 1004 DIVFLRAWTQVEAPCFYNPLTTALQPRNKTWQGMKTVAELRRE 1046


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  260 bits (665), Expect = 3e-67
 Identities = 134/285 (47%), Positives = 184/285 (64%), Gaps = 9/285 (3%)
 Frame = +3

Query: 108  NSLDEEPQFEIKSFSTGTYLAFEVLDVPSEMVTNGDPCQPILVGGINPTEQS-GYLQAKL 284
            N LDEE + E++ F TGTYL  EV DVP EMV + DP  P+LVGGI   E++ GY+Q ++
Sbjct: 723  NDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRI 782

Query: 285  ERHSWHMNSLKSNDPIVVSVGWRRYQTLPIY-TRDHGGRRRMLQYTPENESCVATFWGPL 461
            +RH WH   LK+ DPI+VS+GWRRYQT+P+Y T D  GR RML+YT E+  C+A FWGPL
Sbjct: 783  KRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPL 842

Query: 462  ASSGAGVAVLRSSADNKAAFQILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGL 638
            A    GV  +++ ++N+A F+I+ATAVVL++ HA ++ KKIK  G P  I K+TALIK +
Sbjct: 843  APPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNM 902

Query: 639  FTSDDEVDLFRKFKIKTEDGTRGMVLEAAKPDFSELNSP------PGEGIAKCTFDSMIH 800
            FTSD E+  F    ++T  G RG V +AAK +    N P      P EGIA+CTF+  I 
Sbjct: 903  FTSDLEIARFEGAAVQTASGIRGQVKKAAKEELG--NQPKKKGGLPREGIARCTFEDRIL 960

Query: 801  MGSIIVMSEWIEIEVPRISNQPMAVLEPSKSVRQSMDSIVETQKK 935
            M  ++ +  W E+EVP   N     L+P     Q M ++ E +++
Sbjct: 961  MSDLVFLRAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAELRRE 1005


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  260 bits (665), Expect = 3e-67
 Identities = 140/290 (48%), Positives = 185/290 (63%), Gaps = 8/290 (2%)
 Frame = +3

Query: 90   KINIGQ-NSLDEEPQFEIKSFSTGTYLAFEVLDVPSEMVTNGDPCQPILVGGINPTEQS- 263
            ++NI + N LDE  + EI+ F TGTYL  E+ DVP EMV   DP  PILVGGI   E++ 
Sbjct: 755  QMNIAELNDLDEATRLEIEGFQTGTYLRLEIRDVPCEMVEYFDPYHPILVGGIGIGEENV 814

Query: 264  GYLQAKLERHSWHMNSLKSNDPIVVSVGWRRYQTLPIYT-RDHGGRRRMLQYTPENESCV 440
            GY+QA+L+RH WH   LK+ DPI+VSVGWRRYQT PIY   D  GR RML+YTPE+  C+
Sbjct: 815  GYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCL 874

Query: 441  ATFWGPLASSGAGVAVLRSSADNKAAFQILATAVVLDY-HAVQIWKKIKRTGTPSLILKE 617
            A FWGPLA    GV  +++ ++N+A F+I ATAVVL++ HA +I KKIK  G P  I K+
Sbjct: 875  AMFWGPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKK 934

Query: 618  TALIKGLFTSDDEVDLFRKFKIKTEDGTRGMVLEAAKPDFSELNSPPG----EGIAKCTF 785
            TALIK +FTSD EV  F    I+T  G RG V +AAK +        G    EGIA+CTF
Sbjct: 935  TALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARCTF 994

Query: 786  DSMIHMGSIIVMSEWIEIEVPRISNQPMAVLEPSKSVRQSMDSIVETQKK 935
            +  I M  I+ +  W ++EVP+  N     L+P     + M ++ E +++
Sbjct: 995  EDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMRTVAELRRE 1044


>ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
            lyrata] gi|297338198|gb|EFH68615.1| hypothetical protein
            ARALYDRAFT_470695 [Arabidopsis lyrata subsp. lyrata]
          Length = 1148

 Score =  260 bits (665), Expect = 3e-67
 Identities = 132/281 (46%), Positives = 180/281 (64%), Gaps = 3/281 (1%)
 Frame = +3

Query: 108  NSLDEEPQFEIKSFSTGTYLAFEVLDVPSEMVTNGDPCQPILVGGINPTEQS-GYLQAKL 284
            N LDEE + E+  F TGTYL  E+ +VP EMV   DPC PILVGGI   E + GY+QA+L
Sbjct: 738  NDLDEETRIELAGFRTGTYLRLEIHNVPYEMVEFFDPCHPILVGGIGFGEDNVGYMQARL 797

Query: 285  ERHSWHMNSLKSNDPIVVSVGWRRYQTLPIYT-RDHGGRRRMLQYTPENESCVATFWGPL 461
            +RH WH   LK+ DPI+VS+GWRRYQT+P+Y   D  GR RML+YTPE+  C+ATFWGPL
Sbjct: 798  KRHRWHKKVLKTRDPIIVSIGWRRYQTMPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPL 857

Query: 462  ASSGAGVAVLRSSADNKAAFQILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGL 638
                 G    ++ ++N+A F+I AT+VVL++ H  +I KKIK  GTP  I K+TA IK +
Sbjct: 858  VPPNTGFVAFQNLSNNQAGFRITATSVVLEFNHQARIVKKIKMVGTPCKIKKKTAFIKDM 917

Query: 639  FTSDDEVDLFRKFKIKTEDGTRGMVLEAAKPDFSELNSPPGEGIAKCTFDSMIHMGSIIV 818
            FTSD E+  F    ++T  G RG V +A K   + L++   EGIA+CTF+  IHM  ++ 
Sbjct: 918  FTSDLEIARFEGSSVRTVSGIRGQVKKAGK---NMLDNKAEEGIARCTFEDQIHMSDMVF 974

Query: 819  MSEWIEIEVPRISNQPMAVLEPSKSVRQSMDSIVETQKKLD 941
            +  W  +EVP+  N     L+P       M + VE +++L+
Sbjct: 975  LRAWTTVEVPQFYNPLTTALQPRDKTWNGMKTFVELRRELN 1015


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  260 bits (665), Expect = 3e-67
 Identities = 134/285 (47%), Positives = 184/285 (64%), Gaps = 9/285 (3%)
 Frame = +3

Query: 108  NSLDEEPQFEIKSFSTGTYLAFEVLDVPSEMVTNGDPCQPILVGGINPTEQS-GYLQAKL 284
            N LDEE + E++ F TGTYL  EV DVP EMV + DP  P+LVGGI   E++ GY+Q ++
Sbjct: 889  NDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRI 948

Query: 285  ERHSWHMNSLKSNDPIVVSVGWRRYQTLPIY-TRDHGGRRRMLQYTPENESCVATFWGPL 461
            +RH WH   LK+ DPI+VS+GWRRYQT+P+Y T D  GR RML+YT E+  C+A FWGPL
Sbjct: 949  KRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPL 1008

Query: 462  ASSGAGVAVLRSSADNKAAFQILATAVVLDY-HAVQIWKKIKRTGTPSLILKETALIKGL 638
            A    GV  +++ ++N+A F+I+ATAVVL++ HA ++ KKIK  G P  I K+TALIK +
Sbjct: 1009 APPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNM 1068

Query: 639  FTSDDEVDLFRKFKIKTEDGTRGMVLEAAKPDFSELNSP------PGEGIAKCTFDSMIH 800
            FTSD E+  F    ++T  G RG V +AAK +    N P      P EGIA+CTF+  I 
Sbjct: 1069 FTSDLEIARFEGAAVQTASGIRGQVKKAAKEELG--NQPKKKGGLPREGIARCTFEDRIL 1126

Query: 801  MGSIIVMSEWIEIEVPRISNQPMAVLEPSKSVRQSMDSIVETQKK 935
            M  ++ +  W E+EVP   N     L+P     Q M ++ E +++
Sbjct: 1127 MSDLVFLRAWTEVEVPCFFNPLTTALQPRDQTWQGMKTVAELRRE 1171


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