BLASTX nr result

ID: Papaver22_contig00000409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000409
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   268   1e-69
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   266   5e-69
ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arab...   266   5e-69
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   265   2e-68

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  273 bits (699), Expect = 4e-71
 Identities = 140/277 (50%), Positives = 180/277 (64%), Gaps = 6/277 (2%)
 Frame = +3

Query: 249  NSLDDEPEFEIKSSSTGTYLAFKVLAVPSEMVTNRDPCLPILVGGINPAEQTAGYLQAKL 428
            N LD+E   EI+   TGTYL  ++  VP EMV + DPC PILVGGI   E+  GY+QA+L
Sbjct: 764  NDLDEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARL 823

Query: 429  KRHSWQMNSLKSNDPIVVSVGWRRYQTLPIYTL-DRGGRRRMLQYTPEDENCVATFWGPL 605
            KRH W    LK+ DP++ S+GWRRYQT P+Y + DR GR RML+YTPE  +C+ATFWGPL
Sbjct: 824  KRHRWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPL 883

Query: 606  AHSGAGVVVLPSSADNKAAFQILATAVVLDY-HAVKIWKKIKRTGTPCLILKKTALIKGL 782
            A    GVV + + A+N+A+F+I ATAVVL++ HA K+ KK+K  G PC I KKTALI  +
Sbjct: 884  APPNTGVVAVQNLANNQASFRITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNM 943

Query: 783  FTSYDEVDLFRNVKIKTEDGIRGAVIEAAKPDCG----ELNSQPTGGIARCTFDRMIHMG 950
            FTS  EV  F    ++T  GIRG V +AAK + G    +    P  GIARCTF+  I M 
Sbjct: 944  FTSDLEVARFEGAAVRTVSGIRGQVKKAAKDEIGNQPTKKGGAPREGIARCTFEDRILMS 1003

Query: 951  SIIILSAWSKTEVPRISNQPMTILEPSNSVWQSMDSI 1061
             I+ L AW++ E P   N   T L+P N  WQ M ++
Sbjct: 1004 DIVFLRAWTQVEAPCFYNPLTTALQPRNKTWQGMKTV 1040



 Score =  109 bits (273), Expect = 1e-21
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = +3

Query: 3   THPYLLVDRFKDITSPEEVCKDGNCARNIILYGYLRGCDIKKGTKVHIAGVGDYPLADVI 182
           +HPY+L DRF+D+T PE V  D  C RNI LYGYLRGC++K+GTKVHIAGVGDY LA V 
Sbjct: 253 SHPYVLADRFEDVTPPERVRVDNKCDRNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVT 312

Query: 183 ISADPCPLPS 212
             ADPCPLPS
Sbjct: 313 ALADPCPLPS 322


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  268 bits (686), Expect = 1e-69
 Identities = 144/286 (50%), Positives = 184/286 (64%), Gaps = 7/286 (2%)
 Frame = +3

Query: 225  QLKINIGQ-NSLDDEPEFEIKSSSTGTYLAFKVLAVPSEMVTNRDPCLPILVGGINPAEQ 401
            Q ++NI + N LD+    EI+   TGTYL  ++  VP EMV   DP  PILVGGI   E+
Sbjct: 753  QKQMNIAELNDLDEATRLEIEGFQTGTYLRLEIRDVPCEMVEYFDPYHPILVGGIGIGEE 812

Query: 402  TAGYLQAKLKRHSWQMNSLKSNDPIVVSVGWRRYQTLPIYTL-DRGGRRRMLQYTPEDEN 578
              GY+QA+LKRH W    LK+ DPI+VSVGWRRYQT PIY + D  GR RML+YTPE  +
Sbjct: 813  NVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMH 872

Query: 579  CVATFWGPLAHSGAGVVVLPSSADNKAAFQILATAVVLDY-HAVKIWKKIKRTGTPCLIL 755
            C+A FWGPLA    GVV + + ++N+A F+I ATAVVL++ HA +I KKIK  G PC I 
Sbjct: 873  CLAMFWGPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIF 932

Query: 756  KKTALIKGLFTSYDEVDLFRNVKIKTEDGIRGAVIEAAKPDCGELNSQPTG----GIARC 923
            KKTALIK +FTS  EV  F    I+T  GIRG V +AAK + G    +  G    GIARC
Sbjct: 933  KKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARC 992

Query: 924  TFDRMIHMGSIIILSAWSKTEVPRISNQPMTILEPSNSVWQSMDSI 1061
            TF+  I M  I+ L AW++ EVP+  N   T L+P +  W+ M ++
Sbjct: 993  TFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMRTV 1038



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 43/70 (61%), Positives = 53/70 (75%)
 Frame = +3

Query: 3   THPYLLVDRFKDITSPEEVCKDGNCARNIILYGYLRGCDIKKGTKVHIAGVGDYPLADVI 182
           +H Y++VDRF+DIT PE+V  +  C R + LYGYLRGC++K G KVHIAGVGDY LA + 
Sbjct: 258 SHSYVMVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAGIT 317

Query: 183 ISADPCPLPS 212
              DPCPLPS
Sbjct: 318 ALPDPCPLPS 327


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  266 bits (681), Expect = 5e-69
 Identities = 144/286 (50%), Positives = 183/286 (63%), Gaps = 7/286 (2%)
 Frame = +3

Query: 225  QLKINIGQ-NSLDDEPEFEIKSSSTGTYLAFKVLAVPSEMVTNRDPCLPILVGGINPAEQ 401
            Q ++NI + N LD+    EI+   TGTYL  ++  VP EMV   DP  PILVGGI   E+
Sbjct: 748  QKQMNIAELNDLDEATRLEIEGFRTGTYLRLEIHDVPCEMVEYFDPYHPILVGGIGIGEE 807

Query: 402  TAGYLQAKLKRHSWQMNSLKSNDPIVVSVGWRRYQTLPIYTL-DRGGRRRMLQYTPEDEN 578
              GY+QA+LKRH W    LK+ DPI+VSVGWRRYQT PIY + D  GR RML+YTPE  +
Sbjct: 808  NVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRDRMLKYTPEHMH 867

Query: 579  CVATFWGPLAHSGAGVVVLPSSADNKAAFQILATAVVLDY-HAVKIWKKIKRTGTPCLIL 755
            C+A FWGPLA    GVV   + ++N+A F+I ATAVVL++ HA +I KKIK  G PC I 
Sbjct: 868  CLAMFWGPLAPPNTGVVAFQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIF 927

Query: 756  KKTALIKGLFTSYDEVDLFRNVKIKTEDGIRGAVIEAAKPDCGELNSQPTG----GIARC 923
            KKTALIK +FTS  EV  F    I+T  GIRG V +AAK + G    +  G    GIARC
Sbjct: 928  KKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARC 987

Query: 924  TFDRMIHMGSIIILSAWSKTEVPRISNQPMTILEPSNSVWQSMDSI 1061
            TF+  I M  I+ L AW++ EVP+  N   T L+P +  W+ M ++
Sbjct: 988  TFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMKTV 1033



 Score =  101 bits (252), Expect = 3e-19
 Identities = 45/70 (64%), Positives = 54/70 (77%)
 Frame = +3

Query: 3   THPYLLVDRFKDITSPEEVCKDGNCARNIILYGYLRGCDIKKGTKVHIAGVGDYPLADVI 182
           +HPY++VDRF+DIT PE+V  +  C R + LYGYLRGC++K G KVHIAGVGDY LA V 
Sbjct: 260 SHPYVMVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAVVT 319

Query: 183 ISADPCPLPS 212
              DPCPLPS
Sbjct: 320 ALPDPCPLPS 329


>ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
            lyrata] gi|297338198|gb|EFH68615.1| hypothetical protein
            ARALYDRAFT_470695 [Arabidopsis lyrata subsp. lyrata]
          Length = 1148

 Score =  266 bits (681), Expect = 5e-69
 Identities = 136/281 (48%), Positives = 181/281 (64%), Gaps = 3/281 (1%)
 Frame = +3

Query: 249  NSLDDEPEFEIKSSSTGTYLAFKVLAVPSEMVTNRDPCLPILVGGINPAEQTAGYLQAKL 428
            N LD+E   E+    TGTYL  ++  VP EMV   DPC PILVGGI   E   GY+QA+L
Sbjct: 738  NDLDEETRIELAGFRTGTYLRLEIHNVPYEMVEFFDPCHPILVGGIGFGEDNVGYMQARL 797

Query: 429  KRHSWQMNSLKSNDPIVVSVGWRRYQTLPIYTL-DRGGRRRMLQYTPEDENCVATFWGPL 605
            KRH W    LK+ DPI+VS+GWRRYQT+P+Y + DR GR RML+YTPE  +C+ATFWGPL
Sbjct: 798  KRHRWHKKVLKTRDPIIVSIGWRRYQTMPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPL 857

Query: 606  AHSGAGVVVLPSSADNKAAFQILATAVVLDY-HAVKIWKKIKRTGTPCLILKKTALIKGL 782
                 G V   + ++N+A F+I AT+VVL++ H  +I KKIK  GTPC I KKTA IK +
Sbjct: 858  VPPNTGFVAFQNLSNNQAGFRITATSVVLEFNHQARIVKKIKMVGTPCKIKKKTAFIKDM 917

Query: 783  FTSYDEVDLFRNVKIKTEDGIRGAVIEAAKPDCGELNSQPTGGIARCTFDRMIHMGSIII 962
            FTS  E+  F    ++T  GIRG V +A K     L+++   GIARCTF+  IHM  ++ 
Sbjct: 918  FTSDLEIARFEGSSVRTVSGIRGQVKKAGK---NMLDNKAEEGIARCTFEDQIHMSDMVF 974

Query: 963  LSAWSKTEVPRISNQPMTILEPSNSVWQSMDS-IETQKKLD 1082
            L AW+  EVP+  N   T L+P +  W  M + +E +++L+
Sbjct: 975  LRAWTTVEVPQFYNPLTTALQPRDKTWNGMKTFVELRRELN 1015



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 45/70 (64%), Positives = 51/70 (72%)
 Frame = +3

Query: 3   THPYLLVDRFKDITSPEEVCKDGNCARNIILYGYLRGCDIKKGTKVHIAGVGDYPLADVI 182
           +HPY+L DR +D+T PE V  D  C RNI LYGYLRGC+ KKG KVHIAGVGDY +A V 
Sbjct: 253 SHPYVLADRLEDVTPPENVQMDKKCDRNITLYGYLRGCNFKKGMKVHIAGVGDYSVAGVT 312

Query: 183 ISADPCPLPS 212
              DPC LPS
Sbjct: 313 ALPDPCSLPS 322


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  265 bits (676), Expect = 2e-68
 Identities = 138/284 (48%), Positives = 184/284 (64%), Gaps = 7/284 (2%)
 Frame = +3

Query: 231  KINIGQ-NSLDDEPEFEIKSSSTGTYLAFKVLAVPSEMVTNRDPCLPILVGGINPAEQTA 407
            ++NI + N LD++   E++   TGTYL  +V  VP EMV + DP  PILVGG+   E+  
Sbjct: 751  QMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENV 810

Query: 408  GYLQAKLKRHSWQMNSLKSNDPIVVSVGWRRYQTLPIYTL-DRGGRRRMLQYTPEDENCV 584
            GY+QA+LKRH W    LK+ DPI+VSVGWRRYQT P+Y + D  GR RML+YTPE  +C+
Sbjct: 811  GYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCL 870

Query: 585  ATFWGPLAHSGAGVVVLPSSADNKAAFQILATAVVLDY-HAVKIWKKIKRTGTPCLILKK 761
            A FWGPLA    G+V + + ++N+A F+I ATAVV+++ HA +I KKIK  G PC I KK
Sbjct: 871  AMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKK 930

Query: 762  TALIKGLFTSYDEVDLFRNVKIKTEDGIRGAVIEAAKPDCGELNSQPTG----GIARCTF 929
            TALIK +FTS  EV  F    I+T  GIRG V + AK + G    +  G    GIARCTF
Sbjct: 931  TALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIARCTF 990

Query: 930  DRMIHMGSIIILSAWSKTEVPRISNQPMTILEPSNSVWQSMDSI 1061
            +  I M  I+ L AW++ EVP+  N   T L+P +  W+ M ++
Sbjct: 991  EDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTV 1034



 Score =  104 bits (259), Expect = 4e-20
 Identities = 47/70 (67%), Positives = 55/70 (78%)
 Frame = +3

Query: 3   THPYLLVDRFKDITSPEEVCKDGNCARNIILYGYLRGCDIKKGTKVHIAGVGDYPLADVI 182
           +HPY+LVDRF+DIT PE+V  +  C R + LYGYLRGC++KKG KVHIAGVGDY LA V 
Sbjct: 253 SHPYVLVDRFEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYGLAHVT 312

Query: 183 ISADPCPLPS 212
              DPCPLPS
Sbjct: 313 GLPDPCPLPS 322


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