BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000381
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   292   8e-77
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   288   1e-75
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   283   6e-74
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   278   2e-72
ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|2...   269   9e-70

>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  292 bits (748), Expect = 8e-77
 Identities = 169/291 (58%), Positives = 199/291 (68%), Gaps = 18/291 (6%)
 Frame = +2

Query: 107 ASSSLVLPSISI-KTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSNKG--CS 277
           ++SSLVLPS+S+ KTL +SK    +                   IS+S   PS++G    
Sbjct: 3   SASSLVLPSLSLPKTLAISKP--TSVSFFSLPFSCSSLKLHSNSISLS---PSSRGFLTL 57

Query: 278 SSRFVTRVAAEFDQAS-----SGRDETNFSPDLKIFVGNLPFSVESADLAELFEQSGTVE 442
           SSRFV  VA   D        S   E +FSPDLK+FVGNLPF+V+SA LA LFEQ+G VE
Sbjct: 58  SSRFVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVE 117

Query: 443 MVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGPPPPK------ 604
           MVEVIYDKI+GRSRGFGFVTMS+ +EV+AA +QFNGYE++GRQLRVNSGPPP +      
Sbjct: 118 MVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNF 177

Query: 605 ----DDYXXXXXXXXXXXXXXXXXXXNRCYVGNLSWGVDDLALETLFNEQGKVLEAKVVY 772
                ++                   NR YVGNLSWGVDDLALETLF+EQGKV EA+V+Y
Sbjct: 178 RGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIY 237

Query: 773 DRETGRSRGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEARQRRQF 925
           DRETGRSRGFGFVTY SAEEV  AI+SLDG DLNGRSIRV++AEAR RRQF
Sbjct: 238 DRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  288 bits (738), Expect = 1e-75
 Identities = 165/285 (57%), Positives = 198/285 (69%), Gaps = 12/285 (4%)
 Frame = +2

Query: 107 ASSSLVLPSISIKTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSN------- 265
           ++SSLVLPS++ KTL L    +                     IS+ SS  S+       
Sbjct: 5   SASSLVLPSLNPKTLSLCNPNK---------PISLSFKLHAKPISIPSSLFSSFVPLQQQ 55

Query: 266 KGCSSSRFVTRVA--AEFDQ---ASSGRDETNFSPDLKIFVGNLPFSVESADLAELFEQS 430
              SSSRFV  VA  +EF Q    SS  DE++FS DLK+FVGNLPF+V+SA LA LFE +
Sbjct: 56  PYSSSSRFVPSVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESA 115

Query: 431 GTVEMVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGPPPPKDD 610
           G VEMVEVIYDK++GRSRGFGFVTMSS DEV+AA +QFNGYE++GR LRVNSGPPP ++ 
Sbjct: 116 GNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRES 175

Query: 611 YXXXXXXXXXXXXXXXXXXXNRCYVGNLSWGVDDLALETLFNEQGKVLEAKVVYDRETGR 790
                               NR YVGNLSW VD+LALE+ F+EQGKV++AKVVYDRE+GR
Sbjct: 176 SFSRSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGR 235

Query: 791 SRGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEARQRRQF 925
           SRGFGFVTY SAEEV+ AIDSL+GA+L+GR+IRVSVAEAR RRQF
Sbjct: 236 SRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  283 bits (723), Expect = 6e-74
 Identities = 154/238 (64%), Positives = 178/238 (74%), Gaps = 9/238 (3%)
 Frame = +2

Query: 239 SVSSSFPSNKGCSSSRFVTRVA-AEFDQASSGRD-------ETNFSPDLKIFVGNLPFSV 394
           S++ S  S+  C SSRFV +V  ++FDQ     D       E NFSPDLKIFVGNLPFS 
Sbjct: 39  SLNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSA 98

Query: 395 ESADLAELFEQSGTVEMVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQL 574
           +SA LAELFE++G VEMVEVIYDK++GRSRGFGFVTMSS +EV+AA +QFNGYE+DGR L
Sbjct: 99  DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158

Query: 575 RVNSGPPPPKDDYXXXXXXXXXXXXXXXXXXXNRCYVGNLSWGVDDLALETLFNEQGKVL 754
           RVNSGPPP K +                    NR YVGNL+WGVD  ALETLF+EQGKV+
Sbjct: 159 RVNSGPPPEKRE---NSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVV 215

Query: 755 EAKVVYDRETGRSRGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEAR-QRRQF 925
           +AKVVYDR++GRSRGFGFVTY SAEEV  AI+SLDG DLNGR+IRVS AEAR  RRQF
Sbjct: 216 DAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  278 bits (710), Expect = 2e-72
 Identities = 162/285 (56%), Positives = 190/285 (66%), Gaps = 12/285 (4%)
 Frame = +2

Query: 107 ASSSLVLPSISIKTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSNKGCSSSR 286
           ++SSL   S++ +TL+L K    T                    S++ S  S   C SSR
Sbjct: 4   SASSLHFLSLTPQTLLLPKPTSQTTSLSFFSLPPS---------SLNLSLSSPSSCFSSR 54

Query: 287 FVTRVAA-EFDQASSGRD-------ETNFSPDLKIFVGNLPFSVESADLAELFEQSGTVE 442
           FV +V   +FDQ     D       E NFSPDLKIFVGNL FS +SA LAELFE++G VE
Sbjct: 55  FVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVE 114

Query: 443 MVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGPPPPK---DDY 613
           MVEVIYDK++GRSRGFGFVTMSS +EV+AA +QFNGYE+DGR LRVNSGPPP K     +
Sbjct: 115 MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSF 174

Query: 614 XXXXXXXXXXXXXXXXXXXNRCYVGNLSWGVDDLALETLFNEQGKVLEAKVVYDRETGRS 793
                              NR YVGNL+WGVD  ALETLF+EQGKV++AKVVYDR++GRS
Sbjct: 175 RENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRS 234

Query: 794 RGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEAR-QRRQF 925
           RGFGFVTY SAEEV  AI+SLDG DLNGR+IRVS AEAR  RRQF
Sbjct: 235 RGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279


>ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|222868100|gb|EEF05231.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  269 bits (687), Expect = 9e-70
 Identities = 153/278 (55%), Positives = 190/278 (68%), Gaps = 5/278 (1%)
 Frame = +2

Query: 107 ASSSLVLPSISIKTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSNKGCSSSR 286
           ++SSLVLPS++    + S   +                     +S+  SF   +   SSR
Sbjct: 5   SASSLVLPSLNHPNTIKSFYSKPNSLFFLSPSSTSSLKP----VSLLLSFQHQQQPLSSR 60

Query: 287 FVTRVA--AEFDQAS---SGRDETNFSPDLKIFVGNLPFSVESADLAELFEQSGTVEMVE 451
           F+  VA  +EF Q     S  DE +FS DLK+FVGNLPF+V+SA LA LFE +G VEMVE
Sbjct: 61  FLKNVAISSEFGQEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVE 120

Query: 452 VIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGPPPPKDDYXXXXXX 631
           VIYDK++GRSRGFGFVTM++ +EV+AA +QFNGYE+DGR LRVN GPPP K+        
Sbjct: 121 VIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKES-----SF 175

Query: 632 XXXXXXXXXXXXXNRCYVGNLSWGVDDLALETLFNEQGKVLEAKVVYDRETGRSRGFGFV 811
                        NR YVGNLSW VD+LALETLF E+G+V++AKVVYDR++GRSRGFGFV
Sbjct: 176 SRGPRGGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFV 235

Query: 812 TYGSAEEVQGAIDSLDGADLNGRSIRVSVAEARQRRQF 925
           TY SAEEV  AIDSL+GA+L+GR+IRVSVAEA+ RRQF
Sbjct: 236 TYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAKPRRQF 273