BLASTX nr result

ID: Papaver22_contig00000377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000377
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   2e-20
ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ...    78   5e-19
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   7e-18
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    77   2e-16
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    67   2e-16

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 84.3 bits (207), Expect(2) = 2e-20
 Identities = 49/151 (32%), Positives = 71/151 (47%)
 Frame = -3

Query: 896 VWLLWNPSIVDISCTSSSRWSIHAIVSLVNSPLYHPWLLSMIYGSPDSAIRQRLWAELEA 717
           +WL+W   I  +          HA+  L +       LL+ ++     + R + W +L  
Sbjct: 68  IWLMWKADIALVHYADYQPNHFHALFKLRSD--IPEVLLTGMHAPSVVSERNKYWVDLTE 125

Query: 716 VSLLSGCSWLALGDFNSFLHPTDKVGGNSVTLSQSQELARVFNNCGLIDMVSSGPRFTWN 537
            S   G  WL  GD N  LH  +K+GG  V   Q ++         L+D+   GP+FTW 
Sbjct: 126 DSPPRGTPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWT 185

Query: 536 NHQTGQHNIKERIDRVAVNSSFQMQFPTTQV 444
           N +TG   IKER+DR  VNS +   FP T+V
Sbjct: 186 NGRTGGSLIKERLDRALVNSEWLDLFPDTKV 216



 Score = 42.4 bits (98), Expect(2) = 2e-20
 Identities = 21/67 (31%), Positives = 33/67 (49%)
 Frame = -2

Query: 1098 MKIIFWNSRGTCRPYFVIVARDIIREHHPVIFAIVETRAFEDRATQIVNKLGFAKAFVVD 919
            MK I WN RG     F+  A D+++ H P +  ++ET+    RA Q   +LG+    ++ 
Sbjct: 1    MKAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIP 60

Query: 918  PIVFSGG 898
                 GG
Sbjct: 61   AFGKRGG 67


>ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
           gi|241947006|gb|EES20151.1| hypothetical protein
           SORBIDRAFT_0011s003210 [Sorghum bicolor]
          Length = 821

 Score = 77.8 bits (190), Expect(2) = 5e-19
 Identities = 46/140 (32%), Positives = 69/140 (49%)
 Frame = -3

Query: 890 LLWNPSIVDISCTSSSRWSIHAIVSLVNSPLYHPWLLSMIYGSPDSAIRQRLWAELEAVS 711
           L+W+ +++    T S R  I  I+S  +  + H W L+  YG P    R+  W  L  + 
Sbjct: 145 LMWHGNVMVAELTKS-RSHIDVILSCDHLKISH-WRLTGFYGEPRWERRRESWYLLRFLR 202

Query: 710 LLSGCSWLALGDFNSFLHPTDKVGGNSVTLSQSQELARVFNNCGLIDMVSSGPRFTWNNH 531
             S   WL LGDFN  L   +++G N   + Q      V N+C L D+   G  +TW+N 
Sbjct: 203 AQSSDPWLCLGDFNEVLAMEEQMGANEREMWQVTAFQDVVNDCALTDLGFHGLPYTWDNR 262

Query: 530 QTGQHNIKERIDRVAVNSSF 471
           Q G  N+K R+DR   ++ F
Sbjct: 263 QEGGRNVKVRLDRALGDNKF 282



 Score = 43.9 bits (102), Expect(2) = 5e-19
 Identities = 23/71 (32%), Positives = 37/71 (52%)
 Frame = -2

Query: 1098 MKIIFWNSRGTCRPYFVIVARDIIREHHPVIFAIVETRAFEDRATQIVNKLGFAKAFVVD 919
            M ++  N RG  RP  V     ++ E  P +  ++ETR  E++A  +  +LGF  A VV 
Sbjct: 76   MNVLSLNCRGCGRPEAVQEIHQLVVEKKPAVVFLMETRMGEEKALGLARRLGFQNAIVVK 135

Query: 918  PIVFSGGCLVV 886
                SGG +++
Sbjct: 136  SEGLSGGLMLM 146


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 76.3 bits (186), Expect(2) = 7e-18
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
 Frame = -3

Query: 896 VWLLWNPSIVDISCTSSSRWSIHAIVSLVNSPLYHPWLLSMIYGSPDSAIRQRLWAELEA 717
           +WL W    V ++   S    +   +  +      PWL S IY SPDS +R+ LW ELE 
Sbjct: 68  IWLFWKSEEVTVTPYGSHSQHLTVEIRRIGDD---PWLFSAIYASPDSTLRKELWRELEQ 124

Query: 716 VSLLSGCSWLALGDFNSFLHPTDKVGGNSVTLS-QSQELARVFNNCGLIDMVSSGPRFTW 540
           +       WL  GDFN      ++ G  S  +  + ++ A    N  LID+  +GP  TW
Sbjct: 125 IKNQYTGPWLLAGDFNETSSLCERNGSESSEMQRRCKDFANWIENNALIDLGFTGPAHTW 184

Query: 539 NNHQTGQHNIKERIDRVAVNSSFQMQF 459
           +   +       R+DR   NS ++++F
Sbjct: 185 SRGLSPTTFKSARLDRGLANSEWKLKF 211



 Score = 41.6 bits (96), Expect(2) = 7e-18
 Identities = 22/74 (29%), Positives = 43/74 (58%)
 Frame = -2

Query: 1098 MKIIFWNSRGTCRPYFVIVARDIIREHHPVIFAIVETRAFEDRATQIVNKLGFAKAFVVD 919
            +KI+ WN +G      ++  R+++R ++P + A+VET    D+A +I +++GF+    V+
Sbjct: 3    IKIMVWNVQGVGTKLTIL--RELMRINNPTVLALVETHISGDQAQRICDRIGFSGQTRVE 60

Query: 918  PIVFSGGCLVVMES 877
               F GG  +  +S
Sbjct: 61   AEGFRGGIWLFWKS 74


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 76.6 bits (187), Expect(2) = 2e-16
 Identities = 45/145 (31%), Positives = 73/145 (50%)
 Frame = -3

Query: 890 LLWNPSIVDISCTSSSRWSIHAIVSLVNSPLYHPWLLSMIYGSPDSAIRQRLWAELEAVS 711
           L+W  S V I    S +  I A++   +   Y    L+ IYG P  A R  LW  L  + 
Sbjct: 70  LMWKDS-VQIKVLQSDKRLIDALLIWQDKEFY----LTCIYGEPVQAERGELWERLTRLG 124

Query: 710 LLSGCSWLALGDFNSFLHPTDKVGGNSVTLSQSQELARVFNNCGLIDMVSSGPRFTWNNH 531
           L     W+  GDFN  + P++K+GG +   S   E  ++ N+CGL ++  SG +F+W  +
Sbjct: 125 LSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGN 184

Query: 530 QTGQHNIKERIDRVAVNSSFQMQFP 456
           +  +  ++ R+DR   N ++   FP
Sbjct: 185 RNDE-LVQCRLDRTVANQAWMELFP 208



 Score = 36.2 bits (82), Expect(2) = 2e-16
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -2

Query: 1098 MKIIFWNSRGTCRPYFVIVARDIIREHHPVIFAIVETRAFEDRATQIVNKLGFAKAFVVD 919
            M+I+ WN +G      V   R+I   + P +  + ET+   +    +V  LGF     V+
Sbjct: 1    MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 918  PIVFSGG 898
            PI  SGG
Sbjct: 61   PIGKSGG 67


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 67.4 bits (163), Expect(2) = 2e-16
 Identities = 45/178 (25%), Positives = 83/178 (46%)
 Frame = -3

Query: 896 VWLLWNPSIVDISCTSSSRWSIHAIVSLVNSPLYHPWLLSMIYGSPDSAIRQRLWAELEA 717
           +WLLW   + +++  +SS   IHA +      L+    L  +Y +P ++ R  LW +L  
Sbjct: 68  LWLLWKAEVGEVTIVNSSSQFIHARIVNGVEALH----LVTVYAAPSASRRSGLWEKLRD 123

Query: 716 VSLLSGCSWLALGDFNSFLHPTDKVGGNSVTLSQSQELARVFNNCGLIDMVSSGPRFTWN 537
           V        +  GDFN+ +   +++GGN      S       ++  LIDM   G R+TW 
Sbjct: 124 VVQAIDEPLIIGGDFNTIIRTDERIGGNGQLSPDSVAFGNWVSDLFLIDMGFKGNRYTWK 183

Query: 536 NHQTGQHNIKERIDRVAVNSSFQMQFPTTQVA*FRIAQDVLWRDLLIIFVPICLLLQK 363
             +   + I +R+DRV   +  ++++    V        VL  D   +++ +CL +++
Sbjct: 184 RGRAASNFIAKRLDRVFCCAHSRLKWQEAFVKHLA----VLSSDHTPLYIQLCLEVKR 237



 Score = 45.4 bits (106), Expect(2) = 2e-16
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = -2

Query: 1098 MKIIFWNSRGTCRPYFVIVARDIIREHHPVIFAIVETRAFEDRATQIVNKLGFAKAFVVD 919
            M  + WN RG  +P F    R I+++ +  I A+ ET A  DR  +    LGF  +F VD
Sbjct: 1    MNCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFRVD 60

Query: 918  PIVFSGG 898
             +  SGG
Sbjct: 61   VVGQSGG 67


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