BLASTX nr result

ID: Papaver22_contig00000346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000346
         (1727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
gb|AAA79033.1| SUP2, partial [Nicotiana tabacum]                      401   e-109
gb|AAA79032.1| EF-1-alpha-related GTP-binding protein [Nicotiana...   399   e-108
ref|XP_002532529.1| eukaryotic peptide chain release factor GTP-...   399   e-108
ref|XP_003532534.1| PREDICTED: eukaryotic peptide chain release ...   391   e-106

>ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|222870975|gb|EEF08106.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  405 bits (1040), Expect = e-110
 Identities = 199/255 (78%), Positives = 222/255 (87%)
 Frame = +2

Query: 503  YLKSVLCSQHVDVQFLPISALLGSNMQTRLDKSVCPWWDGPCLFEVMDVIEVPLRDPKGP 682
            +LKS   +   DVQFLPIS L+G+NM+TRLDK+VCPWW+GPCLFE +D IEVP RDP GP
Sbjct: 264  FLKSSGYNVKKDVQFLPISGLMGTNMKTRLDKAVCPWWNGPCLFEALDSIEVPPRDPNGP 323

Query: 683  VRMPIIDKFKDMGTVVMGKIESGSIREGDNLVVLPNKAHVKVLAVYCDENKVRRAGPGEN 862
            +RMPIIDKFKDMGTVVMGK+ESGS+ EGD L+V+PNK  VKVLAV+CDENKVRRAGPGEN
Sbjct: 324  LRMPIIDKFKDMGTVVMGKVESGSVTEGDTLLVMPNKTQVKVLAVFCDENKVRRAGPGEN 383

Query: 863  VRVKLSGIEEEDILEGFVLCSTANPITAVTEFNAQLQILELLDNAIFTAGYKAVLHVHSA 1042
            VRVKLSGI++EDIL GFVL S A PI AVTEF+AQLQILELLDNAIFTAGYKAVLHVHS 
Sbjct: 384  VRVKLSGIDDEDILSGFVLSSVARPIFAVTEFDAQLQILELLDNAIFTAGYKAVLHVHSV 443

Query: 1043 VEECEIVELLAQIDXXXXXXXXXXILFVKNGAVVLCRIQVSNLICVEKFSDFPQLGRFTL 1222
            VEECEIV+LL QID          +LFVKNGA+VLCRIQV+NLICVEKFSDFPQLGRFTL
Sbjct: 444  VEECEIVQLLQQIDPKTRKPMKKKVLFVKNGAIVLCRIQVNNLICVEKFSDFPQLGRFTL 503

Query: 1223 RTEGKTVAVGKITSM 1267
            RTEGKTVAVGK+T +
Sbjct: 504  RTEGKTVAVGKVTEL 518


>gb|AAA79033.1| SUP2, partial [Nicotiana tabacum]
          Length = 409

 Score =  401 bits (1030), Expect = e-109
 Identities = 196/255 (76%), Positives = 222/255 (87%)
 Frame = +2

Query: 503  YLKSVLCSQHVDVQFLPISALLGSNMQTRLDKSVCPWWDGPCLFEVMDVIEVPLRDPKGP 682
            +L+S   +   DVQFLPIS LLGSN++TR++KSVCPWW+GPCLFE +D +EVP RDP GP
Sbjct: 148  FLRSSGYNVKKDVQFLPISGLLGSNLKTRMEKSVCPWWNGPCLFETLDAVEVPPRDPNGP 207

Query: 683  VRMPIIDKFKDMGTVVMGKIESGSIREGDNLVVLPNKAHVKVLAVYCDENKVRRAGPGEN 862
            +RMPIIDKFKDMGTVVMGKIESGSIREGDNL+V+PNKA VKVLA++CDE+KVR  GPGEN
Sbjct: 208  LRMPIIDKFKDMGTVVMGKIESGSIREGDNLLVMPNKAAVKVLAIFCDEDKVRHVGPGEN 267

Query: 863  VRVKLSGIEEEDILEGFVLCSTANPITAVTEFNAQLQILELLDNAIFTAGYKAVLHVHSA 1042
            VRV+LSG+EE+DIL GFVLCS A PI AVTEF AQLQILELLDNAIFTAGYKAVLH+HS 
Sbjct: 268  VRVRLSGVEEDDILSGFVLCSVAKPIHAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSV 327

Query: 1043 VEECEIVELLAQIDXXXXXXXXXXILFVKNGAVVLCRIQVSNLICVEKFSDFPQLGRFTL 1222
            VEECEIVEL+ QID           LFVKNGA+VLCR+QV+NLICVEKFSDF QLGRFTL
Sbjct: 328  VEECEIVELMQQIDLKTKKPMKKKPLFVKNGAIVLCRVQVNNLICVEKFSDFAQLGRFTL 387

Query: 1223 RTEGKTVAVGKITSM 1267
            RTEGKTVAVGKIT++
Sbjct: 388  RTEGKTVAVGKITAL 402


>gb|AAA79032.1| EF-1-alpha-related GTP-binding protein [Nicotiana tabacum]
          Length = 515

 Score =  399 bits (1024), Expect = e-108
 Identities = 194/255 (76%), Positives = 221/255 (86%)
 Frame = +2

Query: 503  YLKSVLCSQHVDVQFLPISALLGSNMQTRLDKSVCPWWDGPCLFEVMDVIEVPLRDPKGP 682
            +L+S   +   DVQFLPIS LLGSN++TR++KSVCPWW+GPCLFE +D +EVP RDP GP
Sbjct: 254  FLRSSGYNVKKDVQFLPISGLLGSNLKTRMEKSVCPWWNGPCLFETLDAVEVPPRDPNGP 313

Query: 683  VRMPIIDKFKDMGTVVMGKIESGSIREGDNLVVLPNKAHVKVLAVYCDENKVRRAGPGEN 862
            +RMPIIDKFKDMGTVVMGKIESGSI EGDNL+++PNKA VKVLA++CDE+KVR  GPGEN
Sbjct: 314  LRMPIIDKFKDMGTVVMGKIESGSIHEGDNLLIIPNKAAVKVLAIFCDEDKVRHVGPGEN 373

Query: 863  VRVKLSGIEEEDILEGFVLCSTANPITAVTEFNAQLQILELLDNAIFTAGYKAVLHVHSA 1042
            VRV+LSG+EE+DIL GFVLCS A PI AVTEF AQLQILELLDNAIFTAGYKAVLH+HS 
Sbjct: 374  VRVRLSGVEEDDILSGFVLCSVAKPIHAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSV 433

Query: 1043 VEECEIVELLAQIDXXXXXXXXXXILFVKNGAVVLCRIQVSNLICVEKFSDFPQLGRFTL 1222
            VEECEIVEL+ QID           LFVKNGA+VLCR+QV+NLICVEKFSDF QLGRFTL
Sbjct: 434  VEECEIVELMQQIDLKTKKPMKKKPLFVKNGAIVLCRVQVNNLICVEKFSDFAQLGRFTL 493

Query: 1223 RTEGKTVAVGKITSM 1267
            RTEGKTVAVGKIT++
Sbjct: 494  RTEGKTVAVGKITAL 508


>ref|XP_002532529.1| eukaryotic peptide chain release factor GTP-binding subunit, putative
            [Ricinus communis] gi|223527760|gb|EEF29863.1| eukaryotic
            peptide chain release factor GTP-binding subunit,
            putative [Ricinus communis]
          Length = 497

 Score =  399 bits (1024), Expect = e-108
 Identities = 191/255 (74%), Positives = 221/255 (86%)
 Frame = +2

Query: 503  YLKSVLCSQHVDVQFLPISALLGSNMQTRLDKSVCPWWDGPCLFEVMDVIEVPLRDPKGP 682
            +L+S   +   DVQFLP+S L+G+NM+TR+DK+ C WW+GPCLFE +D IEVPLRDPKGP
Sbjct: 236  FLRSSGYNVKKDVQFLPLSGLVGTNMKTRVDKNTCSWWNGPCLFEALDAIEVPLRDPKGP 295

Query: 683  VRMPIIDKFKDMGTVVMGKIESGSIREGDNLVVLPNKAHVKVLAVYCDENKVRRAGPGEN 862
             RMPIIDKFKDMGTVVMGK+ESGS+ EGD+L+V+PNK HVKV+AVYCDENKVRRAGPGEN
Sbjct: 296  FRMPIIDKFKDMGTVVMGKVESGSVTEGDSLLVMPNKTHVKVVAVYCDENKVRRAGPGEN 355

Query: 863  VRVKLSGIEEEDILEGFVLCSTANPITAVTEFNAQLQILELLDNAIFTAGYKAVLHVHSA 1042
            +RV+LSGI++EDIL GFVL S A PI AVTEF AQLQILELLDNAIFTAGYKAVLH+HS 
Sbjct: 356  LRVRLSGIDDEDILAGFVLSSVAKPIVAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSV 415

Query: 1043 VEECEIVELLAQIDXXXXXXXXXXILFVKNGAVVLCRIQVSNLICVEKFSDFPQLGRFTL 1222
            VEECEIVELL QID          +LFVKNGAVV+CR+Q +N+IC+EKFSDFPQLGRFTL
Sbjct: 416  VEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQANNMICIEKFSDFPQLGRFTL 475

Query: 1223 RTEGKTVAVGKITSM 1267
            RTEGKTVAVGK+T +
Sbjct: 476  RTEGKTVAVGKVTEL 490


>ref|XP_003532534.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
            subunit ERF3A-like [Glycine max]
          Length = 570

 Score =  391 bits (1005), Expect = e-106
 Identities = 186/244 (76%), Positives = 216/244 (88%)
 Frame = +2

Query: 536  DVQFLPISALLGSNMQTRLDKSVCPWWDGPCLFEVMDVIEVPLRDPKGPVRMPIIDKFKD 715
            DV FLPIS L+G+NM+TR+DKSVCPWW+GPCLFE +D IEVPLRDPKGP RMPIIDKFKD
Sbjct: 327  DVLFLPISGLMGANMKTRVDKSVCPWWNGPCLFEALDAIEVPLRDPKGPFRMPIIDKFKD 386

Query: 716  MGTVVMGKIESGSIREGDNLVVLPNKAHVKVLAVYCDENKVRRAGPGENVRVKLSGIEEE 895
            MGTVVMGK+ESGS+REGD+L+V+PNK  VKV+A++ DE++V+RAGPGEN+R++LSG+E+E
Sbjct: 387  MGTVVMGKVESGSVREGDSLLVMPNKDQVKVVAIFIDEDRVKRAGPGENLRIRLSGVEDE 446

Query: 896  DILEGFVLCSTANPITAVTEFNAQLQILELLDNAIFTAGYKAVLHVHSAVEECEIVELLA 1075
            DIL GFVL S ANPI AVTEF AQL ILELLDNAIFTAGYKAVLH+HS VEECEIVELL 
Sbjct: 447  DILSGFVLSSVANPIPAVTEFVAQLVILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQ 506

Query: 1076 QIDXXXXXXXXXXILFVKNGAVVLCRIQVSNLICVEKFSDFPQLGRFTLRTEGKTVAVGK 1255
            QID          +LFVKNGAVV+CR+QV+N IC+EKFSDFPQLGRFTLRTEGKTVAVGK
Sbjct: 507  QIDTKTKKPMKKKVLFVKNGAVVMCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGK 566

Query: 1256 ITSM 1267
            +T +
Sbjct: 567  VTGL 570


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