BLASTX nr result

ID: Papaver22_contig00000252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000252
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 ...    44   6e-09
emb|CBI17233.3| unnamed protein product [Vitis vinifera]               44   2e-08
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    44   2e-08
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...    43   2e-08
ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...    44   2e-08

>ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Brachypodium
           distachyon]
          Length = 1178

 Score = 44.3 bits (103), Expect(2) = 6e-09
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = -2

Query: 813 FYAPMSGLGGLLYDKDAVYIEFPD 742
           FYAPMSGLG LLYDKDAVYI   D
Sbjct: 337 FYAPMSGLGDLLYDKDAVYININD 360



 Score = 43.5 bits (101), Expect(2) = 6e-09
 Identities = 20/27 (74%), Positives = 21/27 (77%)
 Frame = -1

Query: 937 VHITNVGDLPLAGVTSLADLCPLPSVA 857
           VHIT  GD  L+GVTSLAD CPLPS A
Sbjct: 299 VHITGAGDFVLSGVTSLADPCPLPSAA 325


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = -2

Query: 813 FYAPMSGLGGLLYDKDAVYIEFPD 742
           FYAPMSGLG LLYDKDAVYI   D
Sbjct: 339 FYAPMSGLGDLLYDKDAVYININD 362



 Score = 42.0 bits (97), Expect(2) = 2e-08
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 937 VHITNVGDLPLAGVTSLADLCPLPSVA 857
           VHI  VGD  LAGVT LAD CPLPS A
Sbjct: 301 VHIAGVGDHSLAGVTGLADPCPLPSAA 327


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = -2

Query: 813 FYAPMSGLGGLLYDKDAVYIEFPD 742
           FYAPMSGLG LLYDKDAVYI   D
Sbjct: 339 FYAPMSGLGDLLYDKDAVYININD 362



 Score = 42.0 bits (97), Expect(2) = 2e-08
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 937 VHITNVGDLPLAGVTSLADLCPLPSVA 857
           VHI  VGD  LAGVT LAD CPLPS A
Sbjct: 301 VHIAGVGDHSLAGVTGLADPCPLPSAA 327


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 20/27 (74%), Positives = 21/27 (77%)
 Frame = -1

Query: 937 VHITNVGDLPLAGVTSLADLCPLPSVA 857
           VHI  VGD  LAGVT+LAD CPLPS A
Sbjct: 301 VHIAGVGDYSLAGVTALADPCPLPSAA 327



 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -2

Query: 813 FYAPMSGLGGLLYDKDAVYIEFPD 742
           FYAPMSG+G LLYDKDAVYI   D
Sbjct: 339 FYAPMSGVGDLLYDKDAVYININD 362


>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
           gi|241921770|gb|EER94914.1| hypothetical protein
           SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 20/24 (83%), Positives = 20/24 (83%)
 Frame = -2

Query: 813 FYAPMSGLGGLLYDKDAVYIEFPD 742
           FYAPMSGLG LLYDKDAVYI   D
Sbjct: 339 FYAPMSGLGDLLYDKDAVYININD 362



 Score = 41.6 bits (96), Expect(2) = 2e-08
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = -1

Query: 937 VHITNVGDLPLAGVTSLADLCPLPSVA 857
           VHIT  GD  L+GVT LAD CPLPS A
Sbjct: 301 VHITGAGDFSLSGVTGLADPCPLPSSA 327


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