BLASTX nr result

ID: Papaver22_contig00000251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000251
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   219   4e-55
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   213   2e-53
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   208   7e-52
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   207   1e-51

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  219 bits (557), Expect = 4e-55
 Identities = 110/168 (65%), Positives = 135/168 (80%)
 Frame = +1

Query: 7   RLTQTKQRFIRQFRNEIYDKAELFYLSGLDNDSGMYLADQIGELAKFISDMKFNPLSWQT 186
           +L +TKQR   +F  EIYD A+LFYLSGL +  G Y+  +I  LA+FIS MKF+PLSW+T
Sbjct: 195 KLKKTKQRLKHRFWTEIYDGAKLFYLSGLIH--GKYVKREIHNLARFISVMKFHPLSWRT 252

Query: 187 AHPYVLVDHFKDVTSTDRVQIDDKCDRNIVMCGYLRGSNLKRGTKVHIAGVGDFPLYDIT 366
           +HPYVL D F+DVT  +RV++D+KCDRNI + GYLRG NLKRGTKVHIAGVGD+ L  +T
Sbjct: 253 SHPYVLADRFEDVTPPERVRVDNKCDRNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVT 312

Query: 367 SLADPCTLPSAAKVKGVGDKERLFYAQMSGLRDLLYDKDAKYIDQLND 510
           +LADPC LPSAAK KG+ DKE+LFYA MSGL DL+YDKDA YI+ +ND
Sbjct: 313 ALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLVYDKDAVYIN-IND 359



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = +1

Query: 457 LRDLLYDKDAKYIDQLNDPDEVTRLEIEGFRAGTYLRLEVRDVPFALTKNID 612
           L++ +  +  + I +LND DE TRLEIEGF+ GTYLRLE+ DVPF + ++ D
Sbjct: 748 LKEEIEIRKQRNIAELNDLDEETRLEIEGFQTGTYLRLELHDVPFEMVEHFD 799


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  213 bits (542), Expect = 2e-53
 Identities = 114/201 (56%), Positives = 145/201 (72%)
 Frame = +1

Query: 7   RLTQTKQRFIRQFRNEIYDKAELFYLSGLDNDSGMYLADQIGELAKFISDMKFNPLSWQT 186
           +L +TKQR   +F  EIYD A+LFYLSGL +  G Y   +I  LA+FIS MKF+PLSW+ 
Sbjct: 198 KLKKTKQRLKHRFWTEIYDGAKLFYLSGLVH--GKYPKREIHNLARFISVMKFHPLSWRA 255

Query: 187 AHPYVLVDHFKDVTSTDRVQIDDKCDRNIVMCGYLRGSNLKRGTKVHIAGVGDFPLYDIT 366
           +HPY+LVD F+DVT  +RVQ+++KCDRNI + GYLRG NLK+GTKVHIAGVGD  L  +T
Sbjct: 256 SHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVT 315

Query: 367 SLADPCTLPSAAKVKGVGDKERLFYAQMSGLRDLLYDKDAKYIDQLNDPDEVTRLEIEGF 546
            LADPC LPSAAK KG+ D+++LFYA MSGL DLLYDKDA YI+ +ND   V    ++  
Sbjct: 316 GLADPCPLPSAAKKKGLRDRDKLFYAPMSGLGDLLYDKDAVYIN-IND-HLVQFSNVDDE 373

Query: 547 RAGTYLRLEVRDVPFALTKNI 609
             G   + + RDV   L K++
Sbjct: 374 NGGAARKGKDRDVGEVLVKSL 394



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +1

Query: 499 QLNDPDEVTRLEIEGFRAGTYLRLEVRDVPFALTKNID 612
           +LND DE TR+E+EGFR GTYLRLEV DVPF + ++ D
Sbjct: 721 ELNDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFD 758


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  213 bits (542), Expect = 2e-53
 Identities = 114/201 (56%), Positives = 145/201 (72%)
 Frame = +1

Query: 7   RLTQTKQRFIRQFRNEIYDKAELFYLSGLDNDSGMYLADQIGELAKFISDMKFNPLSWQT 186
           +L +TKQR   +F  EIYD A+LFYLSGL +  G Y   +I  LA+FIS MKF+PLSW+ 
Sbjct: 198 KLKKTKQRLKHRFWTEIYDGAKLFYLSGLVH--GKYPKREIHNLARFISVMKFHPLSWRA 255

Query: 187 AHPYVLVDHFKDVTSTDRVQIDDKCDRNIVMCGYLRGSNLKRGTKVHIAGVGDFPLYDIT 366
           +HPY+LVD F+DVT  +RVQ+++KCDRNI + GYLRG NLK+GTKVHIAGVGD  L  +T
Sbjct: 256 SHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVT 315

Query: 367 SLADPCTLPSAAKVKGVGDKERLFYAQMSGLRDLLYDKDAKYIDQLNDPDEVTRLEIEGF 546
            LADPC LPSAAK KG+ D+++LFYA MSGL DLLYDKDA YI+ +ND   V    ++  
Sbjct: 316 GLADPCPLPSAAKKKGLRDRDKLFYAPMSGLGDLLYDKDAVYIN-IND-HLVQFSNVDDE 373

Query: 547 RAGTYLRLEVRDVPFALTKNI 609
             G   + + RDV   L K++
Sbjct: 374 NGGAARKGKDRDVGEVLVKSL 394



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +1

Query: 499  QLNDPDEVTRLEIEGFRAGTYLRLEVRDVPFALTKNID 612
            +LND DE TR+E+EGFR GTYLRLEV DVPF + ++ D
Sbjct: 887  ELNDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFD 924


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  208 bits (529), Expect = 7e-52
 Identities = 106/168 (63%), Positives = 132/168 (78%)
 Frame = +1

Query: 7   RLTQTKQRFIRQFRNEIYDKAELFYLSGLDNDSGMYLADQIGELAKFISDMKFNPLSWQT 186
           +L +TKQR   +F  EIYD A+LFYLSGL +  G Y   +I  LA+FIS MKF+PLSW+T
Sbjct: 198 KLRKTKQRLKHRFWTEIYDGAKLFYLSGLIH--GKYPRREIHNLARFISVMKFHPLSWRT 255

Query: 187 AHPYVLVDHFKDVTSTDRVQIDDKCDRNIVMCGYLRGSNLKRGTKVHIAGVGDFPLYDIT 366
           +HPYVLVD F+DVT  ++V ++ K DRN+ + GYLRG NLK+GTKVHIAGVGD+ L  +T
Sbjct: 256 SHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVT 315

Query: 367 SLADPCTLPSAAKVKGVGDKERLFYAQMSGLRDLLYDKDAKYIDQLND 510
           +LADPC LPSAAK KG+ DKE+LFYA MSG+ DLLYDKDA YI+ +ND
Sbjct: 316 ALADPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYIN-IND 362



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 493 IDQLNDPDEVTRLEIEGFRAGTYLRLEVRDVPFALTKNID 612
           I +LND DEVTRLEIEGF+ GTY+RLEV DVPF + ++ D
Sbjct: 719 IAELNDLDEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFD 758


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  207 bits (527), Expect = 1e-51
 Identities = 108/168 (64%), Positives = 128/168 (76%)
 Frame = +1

Query: 7   RLTQTKQRFIRQFRNEIYDKAELFYLSGLDNDSGMYLADQIGELAKFISDMKFNPLSWQT 186
           +L +TKQR   +F  EI   A+LFYLSGL +  G Y   ++  LA+FIS MKF PLSW+T
Sbjct: 199 KLRKTKQRLKHRFWTEIRTGAKLFYLSGLVH--GKYPKREVHNLARFISVMKFQPLSWRT 256

Query: 187 AHPYVLVDHFKDVTSTDRVQIDDKCDRNIVMCGYLRGSNLKRGTKVHIAGVGDFPLYDIT 366
            HPYVLVD F+DVT  +RV  ++KCDRNI + GYLRG NLK GTKVHIAGVGDF L  +T
Sbjct: 257 NHPYVLVDRFEDVTPPERVHTNNKCDRNITLYGYLRGCNLKYGTKVHIAGVGDFELASVT 316

Query: 367 SLADPCTLPSAAKVKGVGDKERLFYAQMSGLRDLLYDKDAKYIDQLND 510
           +LADPC LPSAAK KG+ DKE+LFYA MSGL DLLYDKDA YI+ +ND
Sbjct: 317 NLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYIN-IND 363


Top