BLASTX nr result
ID: Papaver22_contig00000222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00000222
(1927 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like... 449 e-135
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin... 437 e-131
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like... 433 e-129
gb|ABK94828.1| unknown [Populus trichocarpa] 429 e-129
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2... 429 e-128
>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
gi|296086696|emb|CBI32331.3| unnamed protein product
[Vitis vinifera]
Length = 367
Score = 449 bits (1156), Expect(2) = e-135
Identities = 233/330 (70%), Positives = 265/330 (80%), Gaps = 5/330 (1%)
Frame = -3
Query: 1178 LLRKQTKSIQMCLASSTVVHPSQTSSIQIVGGKAPNWYSNGD-----TYEGADGEIDWPD 1014
+L Q K LA++ H + +S+IQIVGGK+ Y NG T+E E W +
Sbjct: 19 VLPSQIKPSTTALAATP--HLASSSTIQIVGGKSHGQYVNGGVSSNRTFEDISEESYWTN 76
Query: 1013 LDADLQYWTRLLRPVQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPLATGHPQMEAWI 834
LDADL +WT+ LRP+QWYPGHIAKT LMDVVIEV+DARIPL+T HPQME+W+
Sbjct: 77 LDADLYHWTKKLRPIQWYPGHIAKTEKELKEQLKLMDVVIEVQDARIPLSTSHPQMESWL 136
Query: 833 GNRKRILVLNREDMISTSDRNAWAHYFANQGTKVVFANGKLGMGAIKLGRLAKSMAVGVN 654
GNRKRILVLNREDMIST DRNAWA Y+A QG KVVF+NG+LGMG++KL RLAK++A GVN
Sbjct: 137 GNRKRILVLNREDMISTEDRNAWATYYAMQGIKVVFSNGQLGMGSMKLSRLAKTLASGVN 196
Query: 653 VKRKSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRLCTAAPRPGVTRHLKWVHFGKDLE 474
VKR++KGLLPR VRAGIVGYPNVGKSSLINRLLKRR+C AAPRPGVTR LKWV FGKDLE
Sbjct: 197 VKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRQLKWVQFGKDLE 256
Query: 473 LLDSPGIIPMRISDQTSAIKLAICDDIGERSYNVADVAAILVQMLMRIPTVGSKALYQRY 294
LLDSPGIIPMRISDQ++AIKLAICDDIGERSY+VADVAAILVQML RIP VG KALY RY
Sbjct: 257 LLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTRIPAVGPKALYNRY 316
Query: 293 KILAEGPGHSGKIFIDKLALQMFNGDVHQA 204
KI + G G IF+ KLALQ+FNGD HQA
Sbjct: 317 KI--DTDGLCGNIFVQKLALQLFNGDTHQA 344
Score = 62.0 bits (149), Expect(2) = e-135
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -2
Query: 138 NGDVHQASFRLLTDFRKGKFGWVALERPP 52
NGD HQA+FR+LTDFRKGKFGW+ALERPP
Sbjct: 338 NGDTHQAAFRILTDFRKGKFGWIALERPP 366
>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
gi|255634965|gb|ACU17841.1| unknown [Glycine max]
Length = 391
Score = 437 bits (1123), Expect(2) = e-131
Identities = 219/312 (70%), Positives = 255/312 (81%), Gaps = 8/312 (2%)
Frame = -3
Query: 1115 SQTSSIQIVGGKAPNWYSNG-------DTYEGADGEID-WPDLDADLQYWTRLLRPVQWY 960
SQ+ +IQI+G P+W NG + ++G GE D W +LD DL +WT+ LRPVQW+
Sbjct: 34 SQSPTIQIIGVGGPSWRENGYGNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWF 93
Query: 959 PGHIAKTXXXXXXXXXLMDVVIEVRDARIPLATGHPQMEAWIGNRKRILVLNREDMISTS 780
PGHIAK LMDVVIEVRD RIP++T HPQM+ W+GNRKRILVLNREDMIST+
Sbjct: 94 PGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDPWLGNRKRILVLNREDMISTA 153
Query: 779 DRNAWAHYFANQGTKVVFANGKLGMGAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAGIV 600
DRNAWA YF GTKVVF+NG+LGMG +KLGRLAK +A VNVKR+SKGLLPRAVRAGIV
Sbjct: 154 DRNAWADYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIV 213
Query: 599 GYPNVGKSSLINRLLKRRLCTAAPRPGVTRHLKWVHFGKDLELLDSPGIIPMRISDQTSA 420
GYPNVGKSSLINRLLKRR+C AAPRPGVTR L+WV FGKDLELLDSPGI+PMRISDQ++A
Sbjct: 214 GYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAA 273
Query: 419 IKLAICDDIGERSYNVADVAAILVQMLMRIPTVGSKALYQRYKILAEGPGHSGKIFIDKL 240
IKLAICDDIGERSY+VADVAAILVQML ++PTVG AL +RYKI + G+IFI+KL
Sbjct: 274 IKLAICDDIGERSYDVADVAAILVQMLSKLPTVGRDALCKRYKI--DVDCRDGRIFIEKL 331
Query: 239 ALQMFNGDVHQA 204
A+++FNGDVHQA
Sbjct: 332 AVRVFNGDVHQA 343
Score = 62.0 bits (149), Expect(2) = e-131
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -2
Query: 138 NGDVHQASFRLLTDFRKGKFGWVALERPPK 49
NGDVHQA+FR+L DFRKGKFGW ALERPPK
Sbjct: 337 NGDVHQAAFRVLADFRKGKFGWTALERPPK 366
>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
biogenesis GTPase A-like [Cucumis sativus]
Length = 370
Score = 433 bits (1113), Expect(2) = e-129
Identities = 219/314 (69%), Positives = 254/314 (80%), Gaps = 3/314 (0%)
Frame = -3
Query: 1136 SSTVVHPSQTSSIQIVGGKAPNWYSNGDTYEGADGEI---DWPDLDADLQYWTRLLRPVQ 966
S++V P T IQIVGGK N+ + ++ E+ DW D +ADL YWT LRPVQ
Sbjct: 37 SASVSSPHPT--IQIVGGKTSNFLGDSTPKGASNNELLEGDWVDFEADLYYWTNALRPVQ 94
Query: 965 WYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPLATGHPQMEAWIGNRKRILVLNREDMIS 786
WYPGHIAKT LMDVVIEVRDARIP++T HPQM+AW+GNR+RILVLNREDMIS
Sbjct: 95 WYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMIS 154
Query: 785 TSDRNAWAHYFANQGTKVVFANGKLGMGAIKLGRLAKSMAVGVNVKRKSKGLLPRAVRAG 606
++DRNAWA YF QG KVVF+NG+ GMG +KLGRLAK++A VNVKR++KGLLPRAVRAG
Sbjct: 155 SADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAG 214
Query: 605 IVGYPNVGKSSLINRLLKRRLCTAAPRPGVTRHLKWVHFGKDLELLDSPGIIPMRISDQT 426
IVGYPNVGKSSLINRLLKRR+C AAPRPGVTR LKWV FG DLELLDSPGIIPMRISDQT
Sbjct: 215 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISDQT 274
Query: 425 SAIKLAICDDIGERSYNVADVAAILVQMLMRIPTVGSKALYQRYKILAEGPGHSGKIFID 246
+AIKLAICDDIGERSYN ADVAAILVQ+L ++P+VG + L +RYK+ + G G+IF+
Sbjct: 275 AAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKV--DAGGQCGQIFVQ 332
Query: 245 KLALQMFNGDVHQA 204
KLALQ+FNGD HQA
Sbjct: 333 KLALQLFNGDNHQA 346
Score = 58.9 bits (141), Expect(2) = e-129
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -2
Query: 138 NGDVHQASFRLLTDFRKGKFGWVALERPPK 49
NGD HQA+FR+L+DFRKGKFGW ALERPP+
Sbjct: 340 NGDNHQAAFRILSDFRKGKFGWTALERPPR 369
>gb|ABK94828.1| unknown [Populus trichocarpa]
Length = 367
Score = 429 bits (1104), Expect(2) = e-129
Identities = 220/316 (69%), Positives = 255/316 (80%), Gaps = 6/316 (1%)
Frame = -3
Query: 1133 STVVHPSQTSS----IQIVGGKA-PNWYSNGDTYEGADGE-IDWPDLDADLQYWTRLLRP 972
+++V P+ SS IQIVGGK+ P+W +G+ G GE DW D + DL +WT+ LRP
Sbjct: 31 ASLVTPASLSSPPPTIQIVGGKSTPSWQGSGNDVCGGGGEETDWYDFETDLYHWTKPLRP 90
Query: 971 VQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPLATGHPQMEAWIGNRKRILVLNREDM 792
VQWYPGHIAKT LMDVVIEVRDARIPL+T HPQM+AW+GNRKRILVLNREDM
Sbjct: 91 VQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDM 150
Query: 791 ISTSDRNAWAHYFANQGTKVVFANGKLGMGAIKLGRLAKSMAVGVNVKRKSKGLLPRAVR 612
IS +DRNAWA YFA QG KVV +NG+LGMG +KL R AKS+A VNVKR+ KGLLPR VR
Sbjct: 151 ISKADRNAWATYFARQGIKVVLSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVR 210
Query: 611 AGIVGYPNVGKSSLINRLLKRRLCTAAPRPGVTRHLKWVHFGKDLELLDSPGIIPMRISD 432
AGIVGYPNVGKSSLINRLLKRR+C AAPRPGVTR L+WV FG DLELLDSPGIIPMRISD
Sbjct: 211 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISD 270
Query: 431 QTSAIKLAICDDIGERSYNVADVAAILVQMLMRIPTVGSKALYQRYKILAEGPGHSGKIF 252
Q++AIKLAICDDIGERSY+V DVAAILVQ+L ++PTVG+KAL RYK+ A+ GKIF
Sbjct: 271 QSAAIKLAICDDIGERSYDVTDVAAILVQILTKLPTVGAKALNNRYKMDAD--DFCGKIF 328
Query: 251 IDKLALQMFNGDVHQA 204
+ KL++ +FNGD HQA
Sbjct: 329 VQKLSVHLFNGDTHQA 344
Score = 60.1 bits (144), Expect(2) = e-129
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -2
Query: 138 NGDVHQASFRLLTDFRKGKFGWVALERPPK 49
NGD HQA+FR+L+DFRKGKFGW ALERPP+
Sbjct: 338 NGDTHQAAFRILSDFRKGKFGWAALERPPR 367
>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
predicted protein [Populus trichocarpa]
Length = 387
Score = 429 bits (1104), Expect(2) = e-128
Identities = 220/316 (69%), Positives = 255/316 (80%), Gaps = 6/316 (1%)
Frame = -3
Query: 1133 STVVHPSQTSS----IQIVGGKA-PNWYSNGDTYEGADGE-IDWPDLDADLQYWTRLLRP 972
+++V P+ SS IQIVGGK+ P+W +G+ G GE DW D + DL +WT+ LRP
Sbjct: 31 ASLVTPASLSSPPPTIQIVGGKSTPSWQGSGNDVCGGGGEETDWYDFETDLYHWTKPLRP 90
Query: 971 VQWYPGHIAKTXXXXXXXXXLMDVVIEVRDARIPLATGHPQMEAWIGNRKRILVLNREDM 792
VQWYPGHIAKT LMDVVIEVRDARIPL+T HPQM+AW+GNRKRILVLNREDM
Sbjct: 91 VQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDM 150
Query: 791 ISTSDRNAWAHYFANQGTKVVFANGKLGMGAIKLGRLAKSMAVGVNVKRKSKGLLPRAVR 612
IS +DRNAWA YFA QG KVV +NG+LGMG +KL R AKS+A VNVKR+ KGLLPR VR
Sbjct: 151 ISKADRNAWATYFARQGIKVVLSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVR 210
Query: 611 AGIVGYPNVGKSSLINRLLKRRLCTAAPRPGVTRHLKWVHFGKDLELLDSPGIIPMRISD 432
AGIVGYPNVGKSSLINRLLKRR+C AAPRPGVTR L+WV FG DLELLDSPGIIPMRISD
Sbjct: 211 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISD 270
Query: 431 QTSAIKLAICDDIGERSYNVADVAAILVQMLMRIPTVGSKALYQRYKILAEGPGHSGKIF 252
Q++AIKLAICDDIGERSY+V DVAAILVQ+L ++PTVG+KAL RYK+ A+ GKIF
Sbjct: 271 QSAAIKLAICDDIGERSYDVTDVAAILVQILTKLPTVGAKALNNRYKMDAD--DFCGKIF 328
Query: 251 IDKLALQMFNGDVHQA 204
+ KL++ +FNGD HQA
Sbjct: 329 VQKLSVHLFNGDTHQA 344
Score = 59.3 bits (142), Expect(2) = e-128
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -2
Query: 138 NGDVHQASFRLLTDFRKGKFGWVALERPP 52
NGD HQA+FR+L+DFRKGKFGW ALERPP
Sbjct: 338 NGDTHQAAFRILSDFRKGKFGWAALERPP 366