BLASTX nr result
ID: Papaver22_contig00000221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00000221
(490 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like... 69 3e-23
ref|XP_002441151.1| hypothetical protein SORBIDRAFT_09g021290 [S... 68 7e-22
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2... 69 1e-21
gb|AAD15335.1| hypothetical protein [Arabidopsis thaliana] gi|72... 65 1e-21
ref|XP_002874896.1| GTP-binding family protein [Arabidopsis lyra... 65 1e-21
>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
gi|296086696|emb|CBI32331.3| unnamed protein product
[Vitis vinifera]
Length = 367
Score = 69.3 bits (168), Expect(4) = 3e-23
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -3
Query: 488 VIEFRDAKVPLATGHPQMEA*IGNGKRILVLNREDMISTLDRNA 357
VIE +DA++PL+T HPQME+ +GN KRILVLNREDMIST DRNA
Sbjct: 115 VIEVQDARIPLSTSHPQMESWLGNRKRILVLNREDMISTEDRNA 158
Score = 43.1 bits (100), Expect(4) = 3e-23
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3
Query: 68 IRAGIVGYPNVGKSSPINRLLK 3
+RAGIVGYPNVGKSS INRLLK
Sbjct: 209 VRAGIVGYPNVGKSSLINRLLK 230
Score = 30.8 bits (68), Expect(4) = 3e-23
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 358 HANQGIKVVFANGKLGMVS 302
+A QGIKVVF+NG+LGM S
Sbjct: 163 YAMQGIKVVFSNGQLGMGS 181
Score = 29.6 bits (65), Expect(4) = 3e-23
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -2
Query: 231 GAIKLGRLAKSMAVGVNVK 175
G++KL RLAK++A GVNVK
Sbjct: 180 GSMKLSRLAKTLASGVNVK 198
>ref|XP_002441151.1| hypothetical protein SORBIDRAFT_09g021290 [Sorghum bicolor]
gi|241946436|gb|EES19581.1| hypothetical protein
SORBIDRAFT_09g021290 [Sorghum bicolor]
Length = 375
Score = 67.8 bits (164), Expect(4) = 7e-22
Identities = 31/44 (70%), Positives = 39/44 (88%)
Frame = -3
Query: 488 VIEFRDAKVPLATGHPQMEA*IGNGKRILVLNREDMISTLDRNA 357
VIE RDA++PL+T HP+M++ +GN KRI+VLNREDMIST DRNA
Sbjct: 123 VIEIRDARIPLSTSHPKMDSWLGNRKRIIVLNREDMISTEDRNA 166
Score = 43.1 bits (100), Expect(4) = 7e-22
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3
Query: 68 IRAGIVGYPNVGKSSPINRLLK 3
+RAGIVGYPNVGKSS INRLLK
Sbjct: 217 VRAGIVGYPNVGKSSLINRLLK 238
Score = 30.8 bits (68), Expect(4) = 7e-22
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 355 ANQGIKVVFANGKLGM 308
ANQG KVVF+NG+LGM
Sbjct: 172 ANQGTKVVFSNGQLGM 187
Score = 26.6 bits (57), Expect(4) = 7e-22
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 231 GAIKLGRLAKSMAVGVNVK 175
G +KLGR+AKS+A VN K
Sbjct: 188 GTMKLGRMAKSVASVVNTK 206
>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
predicted protein [Populus trichocarpa]
Length = 387
Score = 68.6 bits (166), Expect(4) = 1e-21
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -3
Query: 488 VIEFRDAKVPLATGHPQMEA*IGNGKRILVLNREDMISTLDRNA 357
VIE RDA++PL+T HPQM+A +GN KRILVLNREDMIS DRNA
Sbjct: 115 VIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNA 158
Score = 43.1 bits (100), Expect(4) = 1e-21
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -3
Query: 68 IRAGIVGYPNVGKSSPINRLLK 3
+RAGIVGYPNVGKSS INRLLK
Sbjct: 209 VRAGIVGYPNVGKSSLINRLLK 230
Score = 28.1 bits (61), Expect(4) = 1e-21
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 355 ANQGIKVVFANGKLGM 308
A QGIKVV +NG+LGM
Sbjct: 164 ARQGIKVVLSNGQLGM 179
Score = 27.3 bits (59), Expect(4) = 1e-21
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 231 GAIKLGRLAKSMAVGVNVK 175
G +KL R AKS+A VNVK
Sbjct: 180 GTMKLSRFAKSLAASVNVK 198
>gb|AAD15335.1| hypothetical protein [Arabidopsis thaliana]
gi|7269764|emb|CAB77764.1| hypothetical protein
[Arabidopsis thaliana]
Length = 375
Score = 64.7 bits (156), Expect(4) = 1e-21
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -3
Query: 488 VIEFRDAKVPLATGHPQMEA*IGNGKRILVLNREDMISTLDRN 360
VIE RDA++PL+T HP+M+A +GN KRILVLNREDMIS DRN
Sbjct: 123 VIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRN 165
Score = 42.7 bits (99), Expect(4) = 1e-21
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -3
Query: 68 IRAGIVGYPNVGKSSPINRLLK 3
+RAGI+GYPNVGKSS INRLLK
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLK 238
Score = 31.2 bits (69), Expect(4) = 1e-21
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 355 ANQGIKVVFANGKLGM 308
A QGIKV+F NGKLGM
Sbjct: 172 AKQGIKVIFTNGKLGM 187
Score = 28.5 bits (62), Expect(4) = 1e-21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 231 GAIKLGRLAKSMAVGVNVK 175
GA+KLGRLAKS+A VN K
Sbjct: 188 GAMKLGRLAKSLAGDVNGK 206
>ref|XP_002874896.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297320733|gb|EFH51155.1| GTP-binding family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 64.7 bits (156), Expect(4) = 1e-21
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -3
Query: 488 VIEFRDAKVPLATGHPQMEA*IGNGKRILVLNREDMISTLDRN 360
VIE RDA++PL+T HP+M+A +GN KRILVLNREDMIS DRN
Sbjct: 120 VIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRN 162
Score = 42.7 bits (99), Expect(4) = 1e-21
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -3
Query: 68 IRAGIVGYPNVGKSSPINRLLK 3
+RAGI+GYPNVGKSS INRLLK
Sbjct: 214 VRAGIIGYPNVGKSSLINRLLK 235
Score = 31.2 bits (69), Expect(4) = 1e-21
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 355 ANQGIKVVFANGKLGM 308
A QGIKV+F NGKLGM
Sbjct: 169 AKQGIKVIFTNGKLGM 184
Score = 28.5 bits (62), Expect(4) = 1e-21
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 231 GAIKLGRLAKSMAVGVNVK 175
GA+KLGRLAKS+A VN K
Sbjct: 185 GAMKLGRLAKSLAGDVNGK 203