BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00000057
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [B...   206   1e-86
gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis...   204   3e-84
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops...   204   3e-84
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab...   204   3e-84
gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia...   204   5e-84

>emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [Brassica juncea]
          Length = 283

 Score =  206 bits (524), Expect(2) = 1e-86
 Identities = 102/127 (80%), Positives = 106/127 (83%)
 Frame = +2

Query: 578 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 757
           LLDGNTL+YFGKNIPIN                YYRITNGLD EDKLHPGGPFDPL LA 
Sbjct: 157 LLDGNTLSYFGKNIPINLVLAVVGEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLDLAK 216

Query: 758 DPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGS 937
           DP+Q ALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVI+G+
Sbjct: 217 DPEQGALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVIAGT 276

Query: 938 VERAPTL 958
            ERAPTL
Sbjct: 277 AERAPTL 283



 Score =  141 bits (355), Expect(2) = 1e-86
 Identities = 68/93 (73%), Positives = 71/93 (76%)
 Frame = +3

Query: 186 TFKTVALFXXXXXXXXXXXXXXXXXNDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 365
           TFKTVALF                 NDELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 34  TFKTVALFSKKKPAPPPKAKTVSAANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 93

Query: 366 GDYGYDPFGLGKKPEDFAKYQGQELIHARWAML 464
           GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAML
Sbjct: 94  GDYGYDPFGLGKKPENFAKYQAFELIHARWAML 126


>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
          Length = 280

 Score =  204 bits (520), Expect(2) = 3e-84
 Identities = 100/127 (78%), Positives = 105/127 (82%)
 Frame = +2

Query: 578 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 757
           LLDGNTLNYFGKNIPIN                YYRITNGLD EDKLHPGGPFDPLGLA 
Sbjct: 154 LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGSEYYRITNGLDFEDKLHPGGPFDPLGLAK 213

Query: 758 DPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGS 937
           DP+Q ALLKVKEIKNGRLAMF+M  FFIQAYVTGEGPVENL+KHLSDPFGNNLLTVI+G+
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGT 273

Query: 938 VERAPTL 958
            ERAPTL
Sbjct: 274 AERAPTL 280



 Score =  135 bits (339), Expect(2) = 3e-84
 Identities = 67/93 (72%), Positives = 71/93 (76%)
 Frame = +3

Query: 186 TFKTVALFXXXXXXXXXXXXXXXXXNDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 365
           TFKTVALF                 +DELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 32  TFKTVALFSKKKPAPAKSKAVSET-SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 90

Query: 366 GDYGYDPFGLGKKPEDFAKYQGQELIHARWAML 464
           GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAML
Sbjct: 91  GDYGYDPFGLGKKPENFAKYQAFELIHARWAML 123


>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
           gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
           Full=Chlorophyll a-b binding protein CP26,
           chloroplastic; AltName: Full=LHCB5; AltName:
           Full=LHCIIc; AltName: Full=Light-harvesting complex II
           protein 5; Flags: Precursor
           gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein
           [Arabidopsis thaliana]
           gi|11908106|gb|AAG41482.1|AF326900_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|12642916|gb|AAK00400.1|AF339718_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|14190463|gb|AAK55712.1|AF380631_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|15983446|gb|AAL11591.1|AF424597_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
           [Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
           chlorophyll a-b binding protein CP26 [Arabidopsis
           thaliana]
          Length = 280

 Score =  204 bits (520), Expect(2) = 3e-84
 Identities = 100/127 (78%), Positives = 105/127 (82%)
 Frame = +2

Query: 578 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 757
           LLDGNTLNYFGKNIPIN                YYRITNGLD EDKLHPGGPFDPLGLA 
Sbjct: 154 LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAK 213

Query: 758 DPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGS 937
           DP+Q ALLKVKEIKNGRLAMF+M  FFIQAYVTGEGPVENL+KHLSDPFGNNLLTVI+G+
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGT 273

Query: 938 VERAPTL 958
            ERAPTL
Sbjct: 274 AERAPTL 280



 Score =  135 bits (339), Expect(2) = 3e-84
 Identities = 67/93 (72%), Positives = 71/93 (76%)
 Frame = +3

Query: 186 TFKTVALFXXXXXXXXXXXXXXXXXNDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 365
           TFKTVALF                 +DELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 32  TFKTVALFSKKKPAPAKSKAVSET-SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 90

Query: 366 GDYGYDPFGLGKKPEDFAKYQGQELIHARWAML 464
           GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAML
Sbjct: 91  GDYGYDPFGLGKKPENFAKYQAFELIHARWAML 123


>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
           lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
           ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  204 bits (520), Expect(2) = 3e-84
 Identities = 100/127 (78%), Positives = 105/127 (82%)
 Frame = +2

Query: 578 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 757
           LLDGNTLNYFGKNIPIN                YYRITNGLD EDKLHPGGPFDPLGLA 
Sbjct: 154 LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAK 213

Query: 758 DPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGS 937
           DP+Q ALLKVKEIKNGRLAMF+M  FFIQAYVTGEGPVENL+KHLSDPFGNNLLTVI+G+
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGT 273

Query: 938 VERAPTL 958
            ERAPTL
Sbjct: 274 AERAPTL 280



 Score =  135 bits (339), Expect(2) = 3e-84
 Identities = 67/93 (72%), Positives = 71/93 (76%)
 Frame = +3

Query: 186 TFKTVALFXXXXXXXXXXXXXXXXXNDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 365
           TFKTVALF                 +DELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 32  TFKTVALFSKKKPAPAKSKAVSET-SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 90

Query: 366 GDYGYDPFGLGKKPEDFAKYQGQELIHARWAML 464
           GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAML
Sbjct: 91  GDYGYDPFGLGKKPENFAKYQAFELIHARWAML 123


>gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia australiana]
          Length = 279

 Score =  204 bits (518), Expect(2) = 5e-84
 Identities = 100/127 (78%), Positives = 103/127 (81%)
 Frame = +2

Query: 578 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 757
           LLDGNTLNYFGKNIPIN                YYRI NGLDLEDKLHPGGPFDPLGLA 
Sbjct: 153 LLDGNTLNYFGKNIPINLVVAVIAEVVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLAS 212

Query: 758 DPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGS 937
           DPDQAA+LK KEIKNGRLAMF+M  FF+QAYVTGEGPVENLSKHLSDPFGNNLLTVIS S
Sbjct: 213 DPDQAAILKAKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLSKHLSDPFGNNLLTVISSS 272

Query: 938 VERAPTL 958
            ER PTL
Sbjct: 273 AERVPTL 279



 Score =  135 bits (339), Expect(2) = 5e-84
 Identities = 68/115 (59%), Positives = 73/115 (63%)
 Frame = +3

Query: 120 EILGNSLKKXXXXXXXXXXXXXTFKTVALFXXXXXXXXXXXXXXXXXNDELAKWYGADRK 299
           E+LG+ LK                K VALF                 NDELAKWYG DR+
Sbjct: 8   EMLGSPLKFAVASRPSSASASTPAKIVALFSKKKAAPAKTKAPPPPANDELAKWYGPDRR 67

Query: 300 IYLPGGLLDRDEIPEYLNGEVAGDYGYDPFGLGKKPEDFAKYQGQELIHARWAML 464
           I+LP GLLDR E+P YLNGEV GDYGYDPFGLGKKPEDFAKYQ  ELIHARWAML
Sbjct: 68  IFLPDGLLDRSEVPAYLNGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWAML 122