BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00054236
         (465 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAA11674.1 unnamed protein product [Nicotiana tabacum]                 92   9e-19
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN...    91   3e-18
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN...    86   2e-16
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN...    86   2e-16
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...    85   2e-16
KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN...    84   5e-16
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]         84   6e-16
KYP50580.1 Retrovirus-related Pol polyprotein from transposon TN...    80   8e-15
CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]         80   1e-14
KYP46555.1 Retrovirus-related Pol polyprotein from transposon TN...    79   1e-14
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN...    80   2e-14
KYP58932.1 Retrovirus-related Pol polyprotein from transposon TN...    79   2e-14
GAV91753.1 hypothetical protein CFOL_v3_35141, partial [Cephalot...    75   2e-14
KYP31774.1 Retrovirus-related Pol polyprotein from transposon TN...    79   3e-14
KYP68607.1 Retrovirus-related Pol polyprotein from transposon TN...    79   3e-14
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]              79   5e-14
AAW22873.1 putative polyprotein [Solanum lycopersicum]                 77   1e-13
KYP54199.1 Retrovirus-related Pol polyprotein from transposon TN...    75   1e-13
GAU23463.1 hypothetical protein TSUD_331610 [Trifolium subterran...    77   2e-13
AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]           77   2e-13

>BAA11674.1 unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 92.0 bits (227), Expect = 9e-19
 Identities = 63/135 (46%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
            ASAVGS MYAMVCTRPDIAHAVGVVS  L N GK+HW+       YLRGTSK+CL  G  
Sbjct: 1113 ASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGED 1172

Query: 288  ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
                + Y                   I  S   +  QSKLQKCVALST EAE I    + 
Sbjct: 1173 NPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEAC 1232

Query: 120  QGDVMVKNLPQRVGF 76
            +  + +K     +GF
Sbjct: 1233 KELIWMKKFLTELGF 1247



 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G+ +P L G+TDADMAGD +  KS SGYL+ F G  +S +S L+             +AT
Sbjct: 1170 GEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAAT 1229

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EACKE++W+K FL ELG  Q  Y + C
Sbjct: 1230 EACKELIWMKKFLTELGFSQDGYQLFC 1256


>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 64/141 (45%), Positives = 78/141 (55%), Gaps = 13/141 (9%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLR---- 295
            +SAVGS MYAMVCTRPDIAHAVGVVS  L N GK HWE       YLRGTSK+CLR    
Sbjct: 1106 SSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCLRFGGA 1165

Query: 294  ----EGIAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY* 127
                EG   A         R S    ++        W QSKLQKC++LST EAE +    
Sbjct: 1166 KPILEGYTDADMAGDLD-DRKSTSGYIFTFSGGAISW-QSKLQKCISLSTTEAEYVAATE 1223

Query: 126  SLQGDVMVKNLPQRVGFEAKE 64
            + +  + +K   Q +G + +E
Sbjct: 1224 AGKEMLWMKKFLQELGLKQEE 1244



 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G A P L+G+TDADMAGD +  KS SGY+ TF G  +S +S L+             +AT
Sbjct: 1163 GGAKPILEGYTDADMAGDLDDRKSTSGYIFTFSGGAISWQSKLQKCISLSTTEAEYVAAT 1222

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EA KEMLW+K FL+ELGLKQ++Y+V C
Sbjct: 1223 EAGKEMLWMKKFLQELGLKQEEYIVYC 1249


>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            GK  P L+G+TDAD+AGD +  KS SGYL TF G  +S +S L+             +AT
Sbjct: 1144 GKGKPVLQGYTDADLAGDIDSRKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAAT 1203

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EACKEMLW+K  L ELG++Q++YVVKC
Sbjct: 1204 EACKEMLWMKNMLLELGVEQERYVVKC 1230



 Score = 75.9 bits (185), Expect = 4e-13
 Identities = 60/138 (43%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL----- 298
            +S VGS MYAM+CTRPDIA+AVGVVS  L + G +HW        YLRGTSK CL     
Sbjct: 1087 SSVVGSLMYAMICTRPDIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKG 1146

Query: 297  ---REGIAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY* 127
                +G   A  L      R S    +         W QSKLQKCVALST EAE I    
Sbjct: 1147 KPVLQGYTDAD-LAGDIDSRKSTSGYLTTFAGGAVSW-QSKLQKCVALSTTEAEYIAATE 1204

Query: 126  SLQGDVMVKNLPQRVGFE 73
            + +  + +KN+   +G E
Sbjct: 1205 ACKEMLWMKNMLLELGVE 1222


>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            GK  P L+G+TDAD+AGD +  KS SGYL TF G  +S +S L+             +AT
Sbjct: 1144 GKGKPVLQGYTDADLAGDIDSRKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAAT 1203

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EACKEMLW+K  L ELG++Q++YVVKC
Sbjct: 1204 EACKEMLWMKNMLLELGVEQERYVVKC 1230



 Score = 75.9 bits (185), Expect = 4e-13
 Identities = 60/138 (43%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL----- 298
            +S VGS MYAM+CTRPDIA+AVGVVS  L + G +HW        YLRGTSK CL     
Sbjct: 1087 SSVVGSLMYAMICTRPDIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKG 1146

Query: 297  ---REGIAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY* 127
                +G   A  L      R S    +         W QSKLQKCVALST EAE I    
Sbjct: 1147 KPVLQGYTDAD-LAGDIDSRKSTSGYLTTFAGGAVSW-QSKLQKCVALSTTEAEYIAATE 1204

Query: 126  SLQGDVMVKNLPQRVGFE 73
            + +  + +KN+   +G E
Sbjct: 1205 ACKEMLWMKNMLLELGVE 1222


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease CAA32025.1 unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 62/139 (44%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
            +SAVGS MYAMVCTRPDIAHAVGVVS  L N GK+HWE       YLRGT+  CL  G  
Sbjct: 1112 SSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS 1171

Query: 288  ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
                  Y                      S   +  QSKLQKCVALST EAE I    + 
Sbjct: 1172 DPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETG 1231

Query: 120  QGDVMVKNLPQRVGFEAKE 64
            +  + +K   Q +G   KE
Sbjct: 1232 KEMIWLKRFLQELGLHQKE 1250



 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G + P LKG+TDADMAGD +  KS +GYL TF G  +S +S L+             +AT
Sbjct: 1169 GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAAT 1228

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            E  KEM+WLK FL+ELGL QK+YVV C
Sbjct: 1229 ETGKEMIWLKRFLQELGLHQKEYVVYC 1255


>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 501

 Score = 84.0 bits (206), Expect = 5e-16
 Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296 GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
           GK  P L+G+TDAD+AGD +  KS SGYL TF G  +S +S L+             +AT
Sbjct: 340 GKGKPVLEGYTDADLAGDIDSRKSTSGYLTTFVGGAVSWQSKLQKCVALSTTEAEYIAAT 399

Query: 128 EACKEMLWLKIFLKELGLKQKKYVVKC 48
           EACKEMLW+K  L ELG+ Q++YV+KC
Sbjct: 400 EACKEMLWMKNMLLELGVDQERYVLKC 426



 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 61/138 (44%), Positives = 74/138 (53%), Gaps = 13/138 (9%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL----- 298
           +S VGS MYAM+CTRPDIA+AVGVVS  L N G +HW        YLRGTSK CL     
Sbjct: 283 SSVVGSLMYAMICTRPDIAYAVGVVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKG 342

Query: 297 ---REGIAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY* 127
               EG   A  L      R S    +   +     W QSKLQKCVALST EAE I    
Sbjct: 343 KPVLEGYTDAD-LAGDIDSRKSTSGYLTTFVGGAVSW-QSKLQKCVALSTTEAEYIAATE 400

Query: 126 SLQGDVMVKNLPQRVGFE 73
           + +  + +KN+   +G +
Sbjct: 401 ACKEMLWMKNMLLELGVD 418


>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 84.0 bits (206), Expect = 6e-16
 Identities = 59/136 (43%), Positives = 73/136 (53%), Gaps = 11/136 (8%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
            ASA+GS MYAMVCTRPDIA+AVGVVS  L N G+ HWE       YLRGTSK+ L  G  
Sbjct: 1083 ASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSG 1142

Query: 288  ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
                + Y                   +  S   +  QS+LQKCVALST EAE I    + 
Sbjct: 1143 KPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAVEAC 1202

Query: 120  QGDVMVKNLPQRVGFE 73
            +  + +K   Q +GF+
Sbjct: 1203 KELLWMKCFMQELGFK 1218



 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G   P L G+TD+DMAGD +  KS SGYL+TF G  +S +S L+             +A 
Sbjct: 1140 GSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAV 1199

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EACKE+LW+K F++ELG KQ++YVV C
Sbjct: 1200 EACKELLWMKCFMQELGFKQQRYVVYC 1226


>KYP50580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 478

 Score = 80.5 bits (197), Expect = 8e-15
 Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
           A AVGS MYAMVCTRPDIAHAVG VS  L N G++HW        YLRGTS + L  G  
Sbjct: 309 AYAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGREHWNAVKWILRYLRGTSGLKLYFGGD 368

Query: 288 ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
               + Y+                  ++ +   +  QS+LQKCVALST EAE I    + 
Sbjct: 369 KPTLVGYSDSDMAGDIDSRKSTSGYLVKFAGGVVAWQSRLQKCVALSTTEAEFIALTEAC 428

Query: 120 QGDVMVKNLPQRVGF 76
           +  + VK   Q +GF
Sbjct: 429 KELLWVKKFLQELGF 443



 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296 GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
           G   PTL G++D+DMAGD +  KS SGYL+ F G  ++ +S L+             + T
Sbjct: 366 GGDKPTLVGYSDSDMAGDIDSRKSTSGYLVKFAGGVVAWQSRLQKCVALSTTEAEFIALT 425

Query: 128 EACKEMLWLKIFLKELGLKQKKYVVKC 48
           EACKE+LW+K FL+ELG  Q KY++ C
Sbjct: 426 EACKELLWVKKFLQELGFVQDKYLLYC 452


>CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 58/136 (42%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
            ASAVGS MYAMVCTRPDIA+A+GVVS  L N G+ HWE       YLRGTSK+ L  G  
Sbjct: 964  ASAVGSLMYAMVCTRPDIAYAIGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSG 1023

Query: 288  ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
                + Y                   +  S   +  QS+LQKCVALST EA+ I    + 
Sbjct: 1024 KPILVGYTDSDMAGDVDNRRXTSGYLMTFSGGAVSWQSRLQKCVALSTTEAKYIATAEAC 1083

Query: 120  QGDVMVKNLPQRVGFE 73
            +  +  K   Q +GF+
Sbjct: 1084 KELLWXKCFMQELGFK 1099



 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G   P L G+TD+DMAGD +  +  SGYL+TF G  +S +S L+             +  
Sbjct: 1021 GSGKPILVGYTDSDMAGDVDNRRXTSGYLMTFSGGAVSWQSRLQKCVALSTTEAKYIATA 1080

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EACKE+LW K F++ELG KQ++Y V C
Sbjct: 1081 EACKELLWXKCFMQELGFKQQRYXVYC 1107


>KYP46555.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 316

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL--REG 289
           ASAVGS MYAMVCTRPDIAHAVGVVS  L N GK+HWE       YL+GTS + L  + G
Sbjct: 101 ASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKKHWEGVKWILRYLKGTSGINLLFKRG 160

Query: 288 IAYAKRLHRCRYG-----R*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*S 124
               +       G     R S    ++        W+ SKLQ  VALST EAE I    +
Sbjct: 161 NFTLQGFSDADLGGDLDTRKSTTGYIFTLGRTAVSWK-SKLQNRVALSTTEAEYIAISEA 219

Query: 123 LQGDVMVKNLPQRVGFEAK 67
            +  + +KN    +G E K
Sbjct: 220 AKEMIWLKNFLSELGKEQK 238


>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 60/138 (43%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREGIA 283
            +SAVGS MYAMVCTRPDIA+AVGVVS  L N GK+HW        YL+GT+K CL  G  
Sbjct: 1096 SSAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNG 1155

Query: 282  YAKRLHRCRYGR*S*PDKVYIRISIN----------FLWRQSKLQKCVALSTIEAESIFC 133
                L    Y        V  R S +            W QS+LQKC+ALST EAE I  
Sbjct: 1156 ---NLMLTGYSDADMAGDVDSRKSTSGYLITFAGGAISW-QSRLQKCIALSTTEAEFIAI 1211

Query: 132  Y*SLQGDVMVKNLPQRVG 79
                +  + +K   Q +G
Sbjct: 1212 TEGCKEILWMKKFLQELG 1229



 Score = 72.0 bits (175), Expect = 9e-12
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G  +  L G++DADMAGD +  KS SGYL+TF G  +S +S L+             + T
Sbjct: 1153 GNGNLMLTGYSDADMAGDVDSRKSTSGYLITFAGGAISWQSRLQKCIALSTTEAEFIAIT 1212

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            E CKE+LW+K FL+ELG  Q+ YV+ C
Sbjct: 1213 EGCKEILWMKKFLQELGQDQESYVLYC 1239


>KYP58932.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 389

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL--REG 289
           ASAVGS MYAMVCTRPDIAHAVGVVS  L N GK+HWE       YL+GTS + L  + G
Sbjct: 174 ASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKKHWEGVKWILRYLKGTSGINLLFKRG 233

Query: 288 IAYAKRLHRCRYG-----R*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*S 124
               +       G     R S    ++        W+ SKLQ  VALST EAE I    +
Sbjct: 234 NFTLQGFSDADLGGDLDTRKSTTGYIFTLGRTAVSWK-SKLQNRVALSTTEAEYIAISEA 292

Query: 123 LQGDVMVKNLPQRVGFEAK 67
            +  + +KN    +G E K
Sbjct: 293 AKEMIWLKNFLSELGKEQK 311


>GAV91753.1 hypothetical protein CFOL_v3_35141, partial [Cephalotus
           follicularis]
          Length = 145

 Score = 75.1 bits (183), Expect = 2e-14
 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296 GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
           G   P L G+TD+DMAGD +  KS SGYL+TF G  ++ +S L+             +AT
Sbjct: 51  GSEKPILVGYTDSDMAGDVDSRKSTSGYLITFSGGAVAWQSRLQKCIALSTTEAEFIAAT 110

Query: 128 EACKEMLWLKIFLKELGLKQKKYVVKC 48
           EACKE+LW+K F++ELG  Q++Y + C
Sbjct: 111 EACKELLWMKRFVQELGFTQERYELFC 137



 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
 Frame = -1

Query: 426 MYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG------IAY 280
           MYAMVCTRPDIAHAVG VS  + N GK+HW        YLRGTS + L  G      + Y
Sbjct: 1   MYAMVCTRPDIAHAVGTVSRFMSNPGKEHWTAVKWILRYLRGTSSLKLSFGSEKPILVGY 60

Query: 279 AKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SLQGDVMVK 100
                              I  S   +  QS+LQKC+ALST EAE I    + +  + +K
Sbjct: 61  TDSDMAGDVDSRKSTSGYLITFSGGAVAWQSRLQKCIALSTTEAEFIAATEACKELLWMK 120

Query: 99  NLPQRVGF 76
              Q +GF
Sbjct: 121 RFVQELGF 128


>KYP31774.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 515

 Score = 79.0 bits (193), Expect = 3e-14
 Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL--REG 289
           ASAVGS MYAMVCTRPDIAHAVGVVS  L N GK+HWE       YL+GTS + L  + G
Sbjct: 300 ASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKKHWEGVKWILRYLKGTSGINLLFKRG 359

Query: 288 IAYAKRLHRCRYG-----R*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*S 124
               +       G     R S    ++        W+ SKLQ  VALST EAE I    +
Sbjct: 360 NFTLQGFSDADLGGDLDTRKSTTGYIFTLGRTAVSWK-SKLQNRVALSTTEAEYIAISEA 418

Query: 123 LQGDVMVKNLPQRVGFEAK 67
            +  + +KN    +G E K
Sbjct: 419 AKEMIWLKNFLSELGKEQK 437


>KYP68607.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1291

 Score = 79.0 bits (193), Expect = 3e-14
 Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL--REG 289
            ASAVGS MYAMVCTRPDIAHAVGVVS  L N GK+HWE       YL+GTS + L  + G
Sbjct: 1060 ASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKKHWEGVKWILRYLKGTSGINLLFKRG 1119

Query: 288  IAYAKRLHRCRYG-----R*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*S 124
                +       G     R S    ++        W+ SKLQ  VALST EAE I    +
Sbjct: 1120 NFTLQGFSDADLGGDLDTRKSTTGYIFTLGRTAVSWK-SKLQNRVALSTTEAEYIAISEA 1178

Query: 123  LQGDVMVKNLPQRVGFEAK 67
             +  + +KN    +G E K
Sbjct: 1179 AKEMIWLKNFLSELGKEQK 1197


>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 78.6 bits (192), Expect = 5e-14
 Identities = 57/135 (42%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
            +SAVGS MYAMVCTRPDIAHAVGVVS  L N G++HW+       YLRGTS + L  G  
Sbjct: 1110 SSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTG 1169

Query: 288  ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
                  Y                   I  +   +  QS+LQKCV LST EAE I    + 
Sbjct: 1170 KPILTGYTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASVEAS 1229

Query: 120  QGDVMVKNLPQRVGF 76
            +  + +K   Q +GF
Sbjct: 1230 KEMLWMKKFLQELGF 1244



 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G   P L G+TD+DMAGD +  KS SGYL+T+ G  +S +S L+             ++ 
Sbjct: 1167 GTGKPILTGYTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASV 1226

Query: 128  EACKEMLWLKIFLKELGLKQKK 63
            EA KEMLW+K FL+ELG  Q +
Sbjct: 1227 EASKEMLWMKKFLQELGFVQDR 1248


>AAW22873.1 putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296 GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
           G   P L+GFTDADMAGD +  KS SGYL  F    +S +S L+             +A 
Sbjct: 529 GGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARGAISWQSKLQKCVALSTTEVEYIAAV 588

Query: 128 EACKEMLWLKIFLKELGLKQKKYVVKC 48
           EA KEMLWLK FL+ELGLKQ +YVV C
Sbjct: 589 EASKEMLWLKRFLQELGLKQSEYVVFC 615



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 57/141 (40%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCL----- 298
           +S VGS MYAMVCTRPDIAHAVG+VS  L N  K HWE       YLRGTS + L     
Sbjct: 472 SSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFGGG 531

Query: 297 ---REGIAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY* 127
               EG   A         + +       + +   +  QSKLQKCVALST E E I    
Sbjct: 532 EPILEGFTDADMAGDLDNRKST--SGYLFKFARGAISWQSKLQKCVALSTTEVEYIAAVE 589

Query: 126 SLQGDVMVKNLPQRVGFEAKE 64
           + +  + +K   Q +G +  E
Sbjct: 590 ASKEMLWLKRFLQELGLKQSE 610


>KYP54199.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 256

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 54/135 (40%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGT--SKVCLREG 289
           ASAVGS MY MVCTRPDIAHAVG V+  L N G++HW        YL GT   K+C R  
Sbjct: 38  ASAVGSLMYEMVCTRPDIAHAVGTVNRFLSNPGREHWNAVKWILRYLHGTVDMKLCFRGD 97

Query: 288 ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
               + Y+                  I+ +   +  QS+LQKCVALSTIE + I    + 
Sbjct: 98  KPTLVGYSDSDMAGDVDSRKSTSGYLIKFAGGAVAWQSRLQKCVALSTIEVKFIAITEAC 157

Query: 120 QGDVMVKNLPQRVGF 76
           +  + +K   Q +GF
Sbjct: 158 KELLWLKKFLQELGF 172



 Score = 70.9 bits (172), Expect = 7e-12
 Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
 Frame = -2

Query: 284 PTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSATEACK 117
           PTL G++D+DMAGD +  KS SGYL+ F G  ++ +S L+             + TEACK
Sbjct: 99  PTLVGYSDSDMAGDVDSRKSTSGYLIKFAGGAVAWQSRLQKCVALSTIEVKFIAITEACK 158

Query: 116 EMLWLKIFLKELGLKQKKYVV 54
           E+LWLK FL+ELG  Q+KY++
Sbjct: 159 ELLWLKKFLQELGFVQEKYLL 179


>GAU23463.1 hypothetical protein TSUD_331610 [Trifolium subterraneum]
          Length = 720

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 15/139 (10%)
 Frame = -1

Query: 447 ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLR---- 295
           ASAVGS MYAMVCTRPDI HAVG VS  L N G++HW        YLRGT+  C+R    
Sbjct: 78  ASAVGSLMYAMVCTRPDITHAVGTVSRFLSNPGREHWNAVKWVLRYLRGTT--CMRLCFG 135

Query: 294 ------EGIAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFC 133
                 EG + +         + +      I+ +   +  QS+LQKCVALST EAE I  
Sbjct: 136 GDKPTLEGYSDSDMAGDIDSRKST--SGYMIKFAGGAVAWQSRLQKCVALSTTEAEFIAI 193

Query: 132 Y*SLQGDVMVKNLPQRVGF 76
             + +  + +K   Q +GF
Sbjct: 194 TEACKELLWLKKFLQELGF 212



 Score = 72.4 bits (176), Expect = 6e-12
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
 Frame = -2

Query: 296 GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
           G   PTL+G++D+DMAGD +  KS SGY++ F G  ++ +S L+             + T
Sbjct: 135 GGDKPTLEGYSDSDMAGDIDSRKSTSGYMIKFAGGAVAWQSRLQKCVALSTTEAEFIAIT 194

Query: 128 EACKEMLWLKIFLKELGLKQKKYVV 54
           EACKE+LWLK FL+ELG  Q KYV+
Sbjct: 195 EACKELLWLKKFLQELGFVQYKYVL 219


>AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 56/135 (41%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
 Frame = -1

Query: 447  ASAVGSSMYAMVCTRPDIAHAVGVVSGSLLNLGKQHWEE-----SYLRGTSKVCLREG-- 289
            ASAVGS MYAMVCTRPDIAH VG VS  + N G++HW        YLRGT+ + L  G  
Sbjct: 1056 ASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGD 1115

Query: 288  ----IAYAKRLHRCRYGR*S*PDKVYIRISINFLWRQSKLQKCVALSTIEAESIFCY*SL 121
                + Y                   I+ +   +  QS+LQKCVALST EAE I    + 
Sbjct: 1116 KPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEAC 1175

Query: 120  QGDVMVKNLPQRVGF 76
            +  + VK L Q + F
Sbjct: 1176 KELLWVKKLLQELSF 1190



 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
 Frame = -2

Query: 296  GKASPTLKGFTDADMAGDHNRIKSISGYLLTFYGDNLSCKSVLR----CRP*RQNLFSAT 129
            G   PTL G+TD+DM GD +  +S SGY++ F G  ++ +S L+             + T
Sbjct: 1113 GGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAIT 1172

Query: 128  EACKEMLWLKIFLKELGLKQKKYVVKC 48
            EACKE+LW+K  L+EL   Q KY++ C
Sbjct: 1173 EACKELLWVKKLLQELSFVQDKYLLFC 1199