BLASTX nr result

ID: Panax25_contig00053769 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00053769
         (787 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN02205.1 hypothetical protein DCAR_010959 [Daucus carota subsp...    45   2e-09

>KZN02205.1 hypothetical protein DCAR_010959 [Daucus carota subsp. sativus]
          Length = 156

 Score = 45.4 bits (106), Expect(2) = 2e-09
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 23/84 (27%)
 Frame = +1

Query: 376 LLYYPSDPEIILPIASPGRDYACRQRYLRSY-----------------------MTFEKQ 486
           ++Y  S   +I  + SPGRDYACRQRYLRSY                          +++
Sbjct: 66  IIYMSSPSPLISIVPSPGRDYACRQRYLRSYTLDANYNNKPKQMMSPAQRAKNWFLRKEK 125

Query: 487 KQNVVNNSTKSFVRAVFTLLFMCM 558
           KQ   +    SF RA  + LF+CM
Sbjct: 126 KQTTKSTDCNSFFRAA-SSLFICM 148



 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = +3

Query: 207 SSCIEGCLDIVERPRPGPGRLDKLH*WAEEDKEFLRNIVVSNK 335
           SSCI GCLD VE PR     L +LH WAEED+EFLR +  S K
Sbjct: 4   SSCIAGCLD-VENPR-----LIRLHQWAEEDREFLRMVSNSYK 40


Top