BLASTX nr result
ID: Panax25_contig00053593
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax25_contig00053593 (800 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AAF65309.1 reverse transcriptase [Picea glauca] 189 5e-53 AFB73911.1 polyprotein [Citrus sinensis] 171 4e-48 KYP53032.1 Retrovirus-related Pol polyprotein from transposon TN... 167 1e-47 KYP42748.1 Retrovirus-related Pol polyprotein from transposon TN... 167 1e-47 KYP67664.1 Retrovirus-related Pol polyprotein from transposon TN... 167 1e-47 KYP38095.1 Retrovirus-related Pol polyprotein from transposon TN... 167 1e-47 AFB73912.1 polyprotein [Citrus sinensis] 167 2e-47 KYP36645.1 Retrovirus-related Pol polyprotein from transposon TN... 166 2e-47 ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] 164 3e-46 ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 164 3e-46 ACL97383.1 Gag-Pol polyprotein [Medicago truncatula] 164 3e-46 ACL97387.1 Gag-Pol polyprotein [Lotus japonicus] 163 7e-46 ACL97385.1 Gag-Pol polyprotein [Medicago truncatula] 162 7e-46 BAD34493.1 Gag-Pol [Ipomoea batatas] 160 2e-45 ABG22119.1 polyprotein, partial [Cynara cardunculus var. scolymus] 162 3e-44 XP_009787759.1 PREDICTED: uncharacterized protein LOC104235647 [... 168 7e-44 KYP42039.1 Retrovirus-related Pol polyprotein from transposon TN... 160 2e-43 KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 160 5e-43 KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 160 5e-43 KZV22485.1 hypothetical protein F511_19705 [Dorcoceras hygrometr... 160 5e-43 >AAF65309.1 reverse transcriptase [Picea glauca] Length = 542 Score = 189 bits (480), Expect = 5e-53 Identities = 103/204 (50%), Positives = 132/204 (64%), Gaps = 23/204 (11%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDMLL+ NN I+ VKS L+ +FDMKDLG +KY+ Sbjct: 266 LYVDDMLLVGNNMDVIKEVKSQLSSKFDMKDLGAANFILGMDIKRDRANRKLWLNQRKYV 325 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 E +L++FN+ G K V+ + LSADQCPK +EEEE+M ++PYASAV SLMY MVCTR Sbjct: 326 ETILQRFNIHGSKPVKVPIPIGVNLSADQCPKIQEEEEDMSHVPYASAVGSLMYAMVCTR 385 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGK-GD*RNFEMVGFVDA 473 PDI AVG LSRYMS GKEHWT +KRV++YL + L +G+ G R ++ GFVDA Sbjct: 386 PDIAHAVGFLSRYMSKLGKEHWTTVKRVFRYLHGTTSYGLCYQGRSGLDRVVDIHGFVDA 445 Query: 474 D*SGDVDSMKSTNGYVFNLSDGHV 545 D GD+D ++ST+GYVFNL G + Sbjct: 446 DWVGDLDHIRSTSGYVFNLFGGAI 469 >AFB73911.1 polyprotein [Citrus sinensis] Length = 1309 Score = 171 bits (434), Expect(3) = 4e-48 Identities = 91/203 (44%), Positives = 123/203 (60%), Gaps = 22/203 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ NK IQ +K+ LA +F+MKDLG K Y+ Sbjct: 988 LYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYL 1047 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +++L++FNM CK + T + KLS+ CP ++ E +EM +PYASAV SLM+ M+CTR Sbjct: 1048 KKILRRFNMQDCKSISTSLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTR 1107 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVGV+SRYM+N G EHW A+KR+ +Y+ D AL G F + G+VD+D Sbjct: 1108 PDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGGS----EFTVRGYVDSD 1163 Query: 477 *SGDVDSMKSTNGYVFNLSDGHV 545 +GD+D KST GYVF L+ V Sbjct: 1164 FAGDLDKRKSTTGYVFTLAGAAV 1186 Score = 37.7 bits (86), Expect(3) = 4e-48 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A K+AI I+RL + G K + + + CDS S H Sbjct: 1201 TEAEYMAATQACKKAIWIQRLLEELGHKQQKILVFCDSQSALH 1243 Score = 32.0 bits (71), Expect(3) = 4e-48 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1242 LHIARNPAFHSRTKHIGVQYHFV 1264 >KYP53032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1305 Score = 167 bits (424), Expect(3) = 1e-47 Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK IQ +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 1044 LKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SR+M++ G+EHW+ +KR+ +Y+ D AL G F + G+VD+D Sbjct: 1104 PDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGS----EFVVRGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD+D KST GYVF L+ G V L Sbjct: 1160 FAGDLDKRKSTTGYVFTLAGGAVSWL 1185 Score = 40.0 bits (92), Expect(3) = 1e-47 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI I+RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALH 1239 Score = 32.0 bits (71), Expect(3) = 1e-47 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGVQYHFV 1260 >KYP42748.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1305 Score = 167 bits (423), Expect(3) = 1e-47 Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK IQ +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 1044 LKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SR+M++ G+EHW+ +KR+ +Y+ D AL G F + G+VD+D Sbjct: 1104 PDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGS----EFFVRGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD+D KST GYVF L+ G V L Sbjct: 1160 FAGDLDKRKSTTGYVFTLAGGAVSWL 1185 Score = 40.0 bits (92), Expect(3) = 1e-47 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI I+RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALH 1239 Score = 32.3 bits (72), Expect(3) = 1e-47 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI I YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGIQYHFV 1260 >KYP67664.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1256 Score = 167 bits (423), Expect(3) = 1e-47 Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK IQ +K+ LA +FDMKDLG K Y+ Sbjct: 935 LYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYL 994 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 995 LKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1054 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SR+M++ G+EHW+ +KR+ +Y+ D AL G F + G+VD+D Sbjct: 1055 PDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGS----EFFVRGYVDSD 1110 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD+D KST GYVF L+ G V L Sbjct: 1111 FAGDLDKRKSTTGYVFTLAGGAVSWL 1136 Score = 40.0 bits (92), Expect(3) = 1e-47 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI I+RL + G K + + + CDS S H Sbjct: 1148 TEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALH 1190 Score = 32.3 bits (72), Expect(3) = 1e-47 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI I YHF+ Sbjct: 1189 LHIARNPAFHSRTKHIGIQYHFV 1211 >KYP38095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1256 Score = 167 bits (423), Expect(3) = 1e-47 Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK IQ +K+ LA +FDMKDLG K Y+ Sbjct: 935 LYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYL 994 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 995 LKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1054 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SR+M++ G+EHW+ +KR+ +Y+ D AL G F + G+VD+D Sbjct: 1055 PDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGS----EFFVRGYVDSD 1110 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD+D KST GYVF L+ G V L Sbjct: 1111 FAGDLDKRKSTTGYVFTLAGGAVSWL 1136 Score = 40.0 bits (92), Expect(3) = 1e-47 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI I+RL + G K + + + CDS S H Sbjct: 1148 TEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALH 1190 Score = 32.3 bits (72), Expect(3) = 1e-47 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI I YHF+ Sbjct: 1189 LHIARNPAFHSRTKHIGIQYHFV 1211 >AFB73912.1 polyprotein [Citrus sinensis] Length = 1309 Score = 167 bits (423), Expect(3) = 2e-47 Identities = 89/203 (43%), Positives = 122/203 (60%), Gaps = 22/203 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ NK IQ +K+ LA +F+MKDLG K Y+ Sbjct: 988 LYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYL 1047 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +++L++FNM CK + T + KLS+ CP ++ E +EM +PYASAV SLM+ M+CTR Sbjct: 1048 KKILRRFNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTR 1107 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SRYM+N G EHW A+KR+ +Y+ + AL G F + G+VD+D Sbjct: 1108 PDIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGGS----EFTVRGYVDSD 1163 Query: 477 *SGDVDSMKSTNGYVFNLSDGHV 545 +GD+D KST GYVF L+ V Sbjct: 1164 FAGDLDKRKSTTGYVFTLAGAAV 1186 Score = 39.7 bits (91), Expect(3) = 2e-47 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI I+RL + G K + + + CDS S H Sbjct: 1201 TEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSALH 1243 Score = 32.0 bits (71), Expect(3) = 2e-47 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1242 LHIARNPAFHSRTKHIGVQYHFV 1264 >KYP36645.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1256 Score = 166 bits (420), Expect(3) = 2e-47 Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK IQ +K+ LA +FDMKDLG + Y+ Sbjct: 935 LYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDKKDRKIWLSQRNYL 994 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 995 LKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1054 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SR+M++ G+EHW+ +KR+ +Y+ D AL G F + G+VD+D Sbjct: 1055 PDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGS----EFFVRGYVDSD 1110 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD+D KST GYVF L+ G V L Sbjct: 1111 FAGDLDKRKSTTGYVFTLAGGAVSWL 1136 Score = 40.0 bits (92), Expect(3) = 2e-47 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI I+RL + G K + + + CDS S H Sbjct: 1148 TEAEYMAATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALH 1190 Score = 32.3 bits (72), Expect(3) = 2e-47 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI I YHF+ Sbjct: 1189 LHIARNPAFHSRTKHIGIQYHFV 1211 >ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 164 bits (415), Expect(3) = 3e-46 Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK +Q +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 1044 RKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVGV+SR+M++ GKEHW A+KR+ +Y+ A+ G + G+VD+D Sbjct: 1104 PDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGS----ELTVRGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD D KST GYVF L+ G V L Sbjct: 1160 FAGDHDKRKSTTGYVFTLAGGAVSWL 1185 Score = 38.9 bits (89), Expect(3) = 3e-46 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI ++RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239 Score = 32.0 bits (71), Expect(3) = 3e-46 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGVQYHFV 1260 >ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 164 bits (415), Expect(3) = 3e-46 Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK +Q +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 1044 RKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVGV+SR+M++ GKEHW A+KR+ +Y+ A+ G + G+VD+D Sbjct: 1104 PDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGS----ELTVWGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD D KST GYVF L+ G V L Sbjct: 1160 FAGDHDKRKSTTGYVFTLAGGAVSWL 1185 Score = 38.9 bits (89), Expect(3) = 3e-46 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI ++RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239 Score = 32.0 bits (71), Expect(3) = 3e-46 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGVQYHFV 1260 >ACL97383.1 Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 164 bits (415), Expect(3) = 3e-46 Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK +Q +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 1044 RKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVGV+SR+M++ GKEHW A+KR+ +Y+ A+ G + G+VD+D Sbjct: 1104 PDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGS----ELTVRGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD D KST GYVF L+ G V L Sbjct: 1160 FAGDHDKRKSTTGYVFTLAGGAVSWL 1185 Score = 38.9 bits (89), Expect(3) = 3e-46 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI ++RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239 Score = 32.0 bits (71), Expect(3) = 3e-46 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGVQYHFV 1260 >ACL97387.1 Gag-Pol polyprotein [Lotus japonicus] Length = 1305 Score = 163 bits (413), Expect(3) = 7e-46 Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML++ NK +Q +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 ++VL++FNM + T + KLS+ P S+ E EM +PYASAV SLMY M+CTR Sbjct: 1044 QKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SR+M++ GKEHW A+KR+ +Y+ AL G F + G+VD+D Sbjct: 1104 PDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGS----EFTIRGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD+D KST GYVF L+ G V L Sbjct: 1160 FAGDLDKRKSTTGYVFTLAGGAVSWL 1185 Score = 38.1 bits (87), Expect(3) = 7e-46 Identities = 21/43 (48%), Positives = 26/43 (60%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI +RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWTQRLLEELGHKQQKITVYCDSPSALH 1239 Score = 32.0 bits (71), Expect(3) = 7e-46 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGVQYHFV 1260 >ACL97385.1 Gag-Pol polyprotein [Medicago truncatula] Length = 1305 Score = 162 bits (411), Expect(3) = 7e-46 Identities = 89/206 (43%), Positives = 121/206 (58%), Gaps = 22/206 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DD+L++ NK +Q +K+ LA +FDMKDLG K Y+ Sbjct: 984 LYVDDILVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYL 1043 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +VL++FNM CK + T + KLS+ P ++ E EM +PYASAV SLMY M+CTR Sbjct: 1044 RKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVGV+SR+M++ GKEHW A+KR+ +Y+ A+ G + G+VD+D Sbjct: 1104 PDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGS----ELTVRGYVDSD 1159 Query: 477 *SGDVDSMKSTNGYVFNLSDGHVKAL 554 +GD D KST GYVF L+ G V L Sbjct: 1160 FAGDHDKRKSTTGYVFTLTGGAVSWL 1185 Score = 38.9 bits (89), Expect(3) = 7e-46 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEYMA A KEAI ++RL + G K + + + CDS S H Sbjct: 1197 TEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALH 1239 Score = 32.0 bits (71), Expect(3) = 7e-46 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L + +NP HS +KHI + YHF+ Sbjct: 1238 LHIARNPAFHSRTKHIGVQYHFV 1260 >BAD34493.1 Gag-Pol [Ipomoea batatas] Length = 1298 Score = 160 bits (405), Expect(3) = 2e-45 Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 22/203 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ NK I +K+ LA +F+MKDLG K Y+ Sbjct: 977 LYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYL 1036 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 +++L +F+M CK + T + K+S+ P ++E EM +PYASAV SLM+ M+CTR Sbjct: 1037 KKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTR 1096 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVGV+SRYM+N G+EHW +KR+ +Y+ D AL G +F + G+VD+D Sbjct: 1097 PDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGS----DFIINGYVDSD 1152 Query: 477 *SGDVDSMKSTNGYVFNLSDGHV 545 +GD+D KST GYVF ++ G V Sbjct: 1153 YAGDLDKSKSTTGYVFKVAGGAV 1175 Score = 38.9 bits (89), Expect(3) = 2e-45 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTH 687 TEAEY+A ASKEAI ++ L + G K + V L CDS S H Sbjct: 1190 TEAEYVAATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALH 1232 Score = 32.7 bits (73), Expect(3) = 2e-45 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 683 LTLTKNPTVHSWSKHIDIHYHFI 751 L L +NP HS +KHI + YHFI Sbjct: 1231 LHLARNPAFHSRTKHIRVQYHFI 1253 >ABG22119.1 polyprotein, partial [Cynara cardunculus var. scolymus] Length = 358 Score = 162 bits (409), Expect = 3e-44 Identities = 88/198 (44%), Positives = 117/198 (59%), Gaps = 22/198 (11%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ NK+ IQ VK L +F+MKDLG + Y+ Sbjct: 85 LYVDDMLIASKNKEDIQLVKDQLNTEFEMKDLGKARKIFGIEISRDRKARTLTLSQRSYV 144 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 E+VLK+FNM G K V T +A KLSA QCP S EE+E M +PY+SAV SLMY M+CTR Sbjct: 145 EKVLKRFNMYGAKTVNTPIAAHFKLSACQCPDSNEEKEYMSRVPYSSAVGSLMYAMICTR 204 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PD+ AV ++SRYM+N G+EHW A++ V +YL D+ + D + G+VD+D Sbjct: 205 PDLAYAVSMVSRYMANPGREHWKAVQWVLRYLSGTRDYCMCFGTSRD----GVQGYVDSD 260 Query: 477 *SGDVDSMKSTNGYVFNL 530 GD+D +S GYVF + Sbjct: 261 YGGDLDGRRSLTGYVFTM 278 >XP_009787759.1 PREDICTED: uncharacterized protein LOC104235647 [Nicotiana sylvestris] Length = 985 Score = 168 bits (426), Expect = 7e-44 Identities = 93/196 (47%), Positives = 119/196 (60%), Gaps = 20/196 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*--------------------KKYIEE 122 LY DDML+ NN I ++K LL+ +FDMKDLG K+YIE Sbjct: 349 LYVDDMLIAANNITEINALKKLLSKEFDMKDLGAAKKILGMEISREDDVVHLSQKRYIER 408 Query: 123 VLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTRPD 302 VL++FNM CK V T +A KLS Q P+S++E E M IPYASAV S+MY MVCTRPD Sbjct: 409 VLERFNMQTCKPVSTPLAPHFKLSESQMPQSEDEVEHMSKIPYASAVGSIMYAMVCTRPD 468 Query: 303 IIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD*S 482 I Q+V V+SRYMSN GK HW A+K + +YL L R G ++G+VD+D + Sbjct: 469 IAQSVSVVSRYMSNPGKRHWEAVKWILRYLKGASGVGLTFRKSG--TGISILGYVDSDYA 526 Query: 483 GDVDSMKSTNGYVFNL 530 GD+D +ST GY+F L Sbjct: 527 GDLDRRRSTTGYIFTL 542 >KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 394 Score = 160 bits (406), Expect = 2e-43 Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 23/204 (11%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ +K I +K+ L +F+MK+LG +KYI Sbjct: 70 LYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYI 129 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 E +L +FNM CK V T +A KLS+D CP++KEE E M ++PYASAV SLMY MVCTR Sbjct: 130 ERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTR 189 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHL-RGKGD*RNFEMVGFVDA 473 PD+ AV ++SRYM N GK+HW+A+K +++YL + L R K N + GFVD+ Sbjct: 190 PDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNN--VAGFVDS 247 Query: 474 D*SGDVDSMKSTNGYVFNLSDGHV 545 D GD+D +S +GY+F L + + Sbjct: 248 DYGGDLDRRRSLSGYIFTLCNSAI 271 >KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1032 Score = 160 bits (406), Expect(3) = 5e-43 Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 23/204 (11%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ +K I +K+ L +F+MK+LG +KYI Sbjct: 708 LYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYI 767 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 E +L +FNM CK V T +A KLS+D CP++KEE E M ++PYASAV SLMY MVCTR Sbjct: 768 ERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTR 827 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHL-RGKGD*RNFEMVGFVDA 473 PD+ AV ++SRYM N GK+HW+A+K +++YL + L R K N + GFVD+ Sbjct: 828 PDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNN--VAGFVDS 885 Query: 474 D*SGDVDSMKSTNGYVFNLSDGHV 545 D GD+D +S +GY+F L + + Sbjct: 886 DYGGDLDRRRSLSGYIFTLCNSAI 909 Score = 32.3 bits (72), Expect(3) = 5e-43 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTHFNEES 702 TEAEY++ KEA+ IR L + G + + CDS S H + S Sbjct: 924 TEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNS 971 Score = 30.8 bits (68), Expect(3) = 5e-43 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 689 LTKNPTVHSWSKHIDIHYHFI 751 LTKN H +KHID+ +HFI Sbjct: 967 LTKNSRYHDKTKHIDVKHHFI 987 >KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 503 Score = 160 bits (406), Expect(3) = 5e-43 Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 23/204 (11%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*----------------------KKYI 116 LY DDML+ +K I +K+ L +F+MK+LG +KYI Sbjct: 179 LYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYI 238 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 E +L +FNM CK V T +A KLS+D CP++KEE E M ++PYASAV SLMY MVCTR Sbjct: 239 ERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTR 298 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHL-RGKGD*RNFEMVGFVDA 473 PD+ AV ++SRYM N GK+HW+A+K +++YL + L R K N + GFVD+ Sbjct: 299 PDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNN--VAGFVDS 356 Query: 474 D*SGDVDSMKSTNGYVFNLSDGHV 545 D GD+D +S +GY+F L + + Sbjct: 357 DYGGDLDRRRSLSGYIFTLCNSAI 380 Score = 32.3 bits (72), Expect(3) = 5e-43 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +1 Query: 559 TEAEYMAFIHASKEAILIRRLCCKFGFK*KTVKLECDS*SDTHFNEES 702 TEAEY++ KEA+ IR L + G + + CDS S H + S Sbjct: 395 TEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLTKNS 442 Score = 30.8 bits (68), Expect(3) = 5e-43 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 689 LTKNPTVHSWSKHIDIHYHFI 751 LTKN H +KHID+ +HFI Sbjct: 438 LTKNSRYHDKTKHIDVKHHFI 458 >KZV22485.1 hypothetical protein F511_19705 [Dorcoceras hygrometricum] Length = 425 Score = 160 bits (405), Expect = 5e-43 Identities = 88/203 (43%), Positives = 118/203 (58%), Gaps = 22/203 (10%) Frame = +3 Query: 3 LYADDMLLIKNNKKTIQSVKSLLALQFDMKDLG*KK----------------------YI 116 LY DDML+ NK +Q +K+ LA +FDMKDLG Y+ Sbjct: 178 LYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYL 237 Query: 117 EEVLKKFNMIGCKLVETFMATETKLSADQCPKSKEEEEEMDNIPYASAVKSLMYEMVCTR 296 ++ L +FNM K + T + KLS+D CP ++ E EM IPYASAV SLM+ M+CTR Sbjct: 238 QKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTR 297 Query: 297 PDIIQAVGVLSRYMSNYGKEHWTAIKRVYKYL*SNFDFALHLRGKGD*RNFEMVGFVDAD 476 PDI QAVG +SRYM+N G+EHW+ +KR+ +Y+ + AL G + G+VD+D Sbjct: 298 PDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGS----YLTLRGYVDSD 353 Query: 477 *SGDVDSMKSTNGYVFNLSDGHV 545 +GD D KST GYVF L+ G V Sbjct: 354 YAGDPDKRKSTTGYVFTLAGGAV 376