BLASTX nr result
ID: Panax25_contig00053000
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00053000
(506 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN72676.1 hypothetical protein VITISV_020406 [Vitis vinifera] 95 2e-19
JAU76848.1 Retrovirus-related Pol polyprotein from transposon TN... 83 2e-15
KYP57183.1 Retrovirus-related Pol polyprotein from transposon TN... 77 2e-13
ADN34143.1 copia-type polyprotein [Cucumis melo subsp. melo] 75 3e-13
AIC77183.1 polyprotein [Gossypium barbadense] 77 3e-13
XP_015158466.1 PREDICTED: uncharacterized protein LOC107057891 [... 71 1e-12
XP_011627079.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 75 1e-12
JAU21819.1 Retrovirus-related Pol polyprotein from transposon TN... 72 2e-12
GAU27529.1 hypothetical protein TSUD_29610 [Trifolium subterraneum] 74 4e-12
OIV90953.1 hypothetical protein TanjilG_16913 [Lupinus angustifo... 73 5e-12
CAN71759.1 hypothetical protein VITISV_020777 [Vitis vinifera] 73 5e-12
KYP31126.1 Retrovirus-related Pol polyprotein from transposon TN... 69 6e-12
KYP57045.1 Retrovirus-related Pol polyprotein from transposon TN... 71 8e-12
KYP58997.1 Retrovirus-related Pol polyprotein from transposon TN... 72 9e-12
KYP79141.1 Retrovirus-related Pol polyprotein from transposon TN... 72 9e-12
XP_013583262.1 PREDICTED: LOW QUALITY PROTEIN: copia protein [Br... 72 1e-11
KYP77007.1 Retrovirus-related Pol polyprotein from transposon TN... 72 1e-11
KYP71150.1 Retrovirus-related Pol polyprotein from transposon TN... 72 1e-11
KYP72617.1 Retrovirus-related Pol polyprotein from transposon TN... 72 1e-11
KYP41769.1 Retrovirus-related Pol polyprotein from transposon TN... 72 1e-11
>CAN72676.1 hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 94.7 bits (234), Expect = 2e-19
Identities = 54/168 (32%), Positives = 84/168 (50%)
Frame = -1
Query: 506 STDRTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKDQNI 327
S +R+KLD+KS KCIF+GY +++KGY+LYNP + K+I+ R+V+FDE + W +D +
Sbjct: 612 SHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDGAL 671
Query: 326 AFVDDGTELTQLQEDVNXXXXXXXXXXXXXXXXXXXXXXXSEXXXXXXXXXXXXXXXXXX 147
+ +E+ Q ++
Sbjct: 672 VEISSESEVAQSEDQ----------------QPSVQIPASPTPSHSPSSPNLSSSSSSQS 715
Query: 146 XXXXXPTKMRSLSDIYASTYALLVAEPLSYDEACGKEEWENSMKEEMS 3
P K RSL DIY +T L VA+P +++EA KEEW ++MKEE++
Sbjct: 716 SEETPPRKFRSLRDIYETTQVLFVADPTTFEEAVEKEEWXSAMKEEIA 763
>JAU76848.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 900
Score = 82.8 bits (203), Expect = 2e-15
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Frame = -1
Query: 500 DRTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQ-QVGDKDQNIA 324
+R KLD KSEKCIF+GYS+++KGYRLYNP + K+I R+V FDE +VW+ + GD +
Sbjct: 259 NRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNGELEE 318
Query: 323 FVDDGTELTQLQEDVNXXXXXXXXXXXXXXXXXXXXXXXSEXXXXXXXXXXXXXXXXXXX 144
V D + + E +
Sbjct: 319 IVVDNNDEQVVSES-------------------PVGSEANTPTNSVPNSPNSSSSNGSDG 359
Query: 143 XXXXPTKMRSLSDIYASTYALLVAEPLSYDEACGKEEWENSMKEEMS 3
P K RSL +IY +A ++P + EA KE+W +M EE++
Sbjct: 360 SSNAPQKFRSLQEIYEVQHAFFTSDPTMFTEAAEKEDWRKAMDEEIT 406
>KYP57183.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 884
Score = 77.4 bits (189), Expect = 2e-13
Identities = 39/74 (52%), Positives = 50/74 (67%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKDQNIAFV 318
RTKLD KS KC+FVG S E+K YRLYNP TKK+II RDV+FDE S+W+ + Q +
Sbjct: 650 RTKLDDKSVKCVFVGVSEESKAYRLYNPTTKKIIISRDVLFDEESMWEWSRAEQQQQISI 709
Query: 317 DDGTELTQLQEDVN 276
D L + ++VN
Sbjct: 710 D----LEEAGQEVN 719
>ADN34143.1 copia-type polyprotein [Cucumis melo subsp. melo]
Length = 238
Score = 74.7 bits (182), Expect = 3e-13
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKD--QNIA 324
R+KLD KSEKC+FVGY A +K Y+LYNP TKK I+ RDV+FDE + W + + + +
Sbjct: 134 RSKLDDKSEKCVFVGYDASSKDYKLYNPITKKTIVSRDVVFDEEASWNWNDEPEDYKFLL 193
Query: 323 FVDDGTELTQL 291
F +D E T +
Sbjct: 194 FPEDHDEPTDI 204
>AIC77183.1 polyprotein [Gossypium barbadense]
Length = 1369
Score = 76.6 bits (187), Expect = 3e-13
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQ--QVGDKDQNIA 324
R KLD + EKCIF+GY +K YRLYNP TKKLII RDV FDE W+ + K + +
Sbjct: 727 RKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYWRWSEEEKKVEGLF 786
Query: 323 FVDDGTELTQLQEDVNXXXXXXXXXXXXXXXXXXXXXXXSEXXXXXXXXXXXXXXXXXXX 144
F +D + +D +
Sbjct: 787 FNEDDNNQEEQGDDQS---------------------------PGTTAPSSPTSSSGSSS 819
Query: 143 XXXXPTKMRSLSDIYAST--------YALLV----AEPLSYDEACGKEEWENSMKEEMS 3
PT+ RSL+DIY ST Y+L +P++Y+EA +W+ +M EE++
Sbjct: 820 LDEAPTRTRSLNDIYNSTEPVETQFDYSLFCLMTECDPVTYEEAIENNKWKKAMDEEIA 878
>XP_015158466.1 PREDICTED: uncharacterized protein LOC107057891 [Solanum tuberosum]
Length = 157
Score = 71.2 bits (173), Expect = 1e-12
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW----QQVGDKDQN 330
R KLD K EKCIF+G S ++K Y+LYNP TKK+++ RDV+FDEN W +G++
Sbjct: 33 RKKLDDKGEKCIFLGVSDQSKAYKLYNPNTKKILVSRDVVFDENQFWLWNKNAMGEQIPI 92
Query: 329 IAFVDDGTELTQLQEDV 279
++G E Q Q+ V
Sbjct: 93 CLDGENGEEAIQPQQQV 109
>XP_011627079.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC18444045
[Amborella trichopoda]
Length = 866
Score = 74.7 bits (182), Expect = 1e-12
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKDQ 333
R KLD K EKC+F+GY TKGY+LYNP TKK+++ R VIFDEN VW ++++
Sbjct: 184 REKLDDKGEKCVFIGYRENTKGYKLYNPITKKVLLSRFVIFDENGVWDWKSNQEK 238
>JAU21819.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 201
Score = 72.0 bits (175), Expect = 2e-12
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQ-QVGDKDQN 330
R+KLD KSEK IF+GY A +KGY+LYNP TKK II R+VIFDE W + D+D N
Sbjct: 108 RSKLDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDEEGEWDWRSNDEDYN 164
>GAU27529.1 hypothetical protein TSUD_29610 [Trifolium subterraneum]
Length = 1263
Score = 73.6 bits (179), Expect = 4e-12
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW 357
R KLD K+EKCIFVGYS ETK Y++YNP T+K++I RDV FDEN W
Sbjct: 690 RKKLDDKAEKCIFVGYSEETKAYKVYNPETQKVVISRDVTFDENGSW 736
>OIV90953.1 hypothetical protein TanjilG_16913 [Lupinus angustifolius]
Length = 372
Score = 72.8 bits (177), Expect = 5e-12
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW 357
R KLD K+EKCIFVGY ETK Y+LYNP T+K+I+ RDV FDE+ VW
Sbjct: 83 RKKLDDKAEKCIFVGYIEETKAYKLYNPETQKVIVSRDVTFDEDGVW 129
>CAN71759.1 hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 73.2 bits (178), Expect = 5e-12
Identities = 31/74 (41%), Positives = 52/74 (70%)
Frame = -1
Query: 506 STDRTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKDQNI 327
S +R+KLD+KS KCIF+GY +++KGY+LYNP + K+I+ R+V+FDE + W +D +
Sbjct: 663 SHNRSKLDEKSVKCIFIGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDGAL 722
Query: 326 AFVDDGTELTQLQE 285
+ +E+ Q ++
Sbjct: 723 VEISSESEVAQSED 736
>KYP31126.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 148
Score = 69.3 bits (168), Expect = 6e-12
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQ 354
R+KLD K EKCIF+G S ++K Y+LYNP TKK+II RDV+F+E W+
Sbjct: 98 RSKLDDKGEKCIFLGVSDQSKAYKLYNPITKKIIISRDVVFNEERFWE 145
>KYP57045.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 269
Score = 71.2 bits (173), Expect = 8e-12
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKDQNIAFV 318
R KLD K EKCIF+G S ++K Y+LYNP TKK+II RDV+F+E W+ D+ + I
Sbjct: 76 RPKLDDKGEKCIFLGVSDQSKAYKLYNPITKKIIISRDVVFNEERFWENNIDETKQILAN 135
Query: 317 DDG 309
DG
Sbjct: 136 FDG 138
>KYP58997.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 946
Score = 72.4 bits (176), Expect = 9e-12
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW 357
R KLD K EKCIF+GYS +K Y+LYNP TKK+II RDV FDE +W
Sbjct: 676 RKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 722
>KYP79141.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 990
Score = 72.4 bits (176), Expect = 9e-12
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW 357
R KLD K EKCIF+GYS +K Y+LYNP TKK+II RDV FDE +W
Sbjct: 363 RKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 409
>XP_013583262.1 PREDICTED: LOW QUALITY PROTEIN: copia protein [Brassica oleracea
var. oleracea]
Length = 1184
Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQ-QVGDKDQNI-- 327
R+KLD KSEK IF+GY A +KGY+LYNP TKK II R+VIFDE W + ++D N
Sbjct: 599 RSKLDDKSEKYIFIGYDANSKGYKLYNPETKKTIINRNVIFDEEGEWDWRSNNEDYNFFP 658
Query: 326 AFVDDGTE 303
+F +D E
Sbjct: 659 SFEEDNVE 666
>KYP77007.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1228
Score = 72.4 bits (176), Expect = 1e-11
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW 357
R KLD K EKCIF+GYS +K Y+LYNP TKK+II RDV FDE +W
Sbjct: 601 RKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 647
>KYP71150.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1228
Score = 72.4 bits (176), Expect = 1e-11
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVW 357
R KLD K EKCIF+GYS +K Y+LYNP TKK+II RDV FDE +W
Sbjct: 601 RKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMW 647
>KYP72617.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 556
Score = 72.0 bits (175), Expect = 1e-11
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQVGDKDQNIAFV 318
R+KLD K EKCIF+G S ++K Y+LYNP TKK+II RDV+F+E W+ D+ + I
Sbjct: 492 RSKLDDKGEKCIFLGVSDQSKAYKLYNPITKKIIISRDVVFNEERFWENNIDETKQILAN 551
Query: 317 DDG 309
DG
Sbjct: 552 FDG 554
>KYP41769.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 638
Score = 72.0 bits (175), Expect = 1e-11
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = -1
Query: 497 RTKLDKKSEKCIFVGYSAETKGYRLYNPFTKKLIIRRDVIFDENSVWQQV 348
R KL+ K EKCIF+GYS +K Y+LYNP TKK+II RDV FDE +W +
Sbjct: 541 RKKLNDKGEKCIFIGYSTNSKAYKLYNPLTKKVIINRDVTFDEEGMWNAI 590