BLASTX nr result

ID: Panax25_contig00052835 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00052835
         (459 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252664.1 PREDICTED: uncharacterized protein LOC108223098 i...    78   7e-14
XP_009801192.1 PREDICTED: uncharacterized protein LOC104246970 [...    55   5e-06
XP_016432715.1 PREDICTED: uncharacterized protein LOC107759331 [...    55   8e-06

>XP_017252664.1 PREDICTED: uncharacterized protein LOC108223098 isoform X6 [Daucus
           carota subsp. sativus]
          Length = 455

 Score = 77.8 bits (190), Expect = 7e-14
 Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
 Frame = -2

Query: 425 FIIRFGIPWIWKWDLQCNC*N-KIPSL*RVFYTKWWDKCLNPTFAELIKNIKTHTQACLD 249
           F  +F IPWIW+W +  +     IP L R F+ KWW K  +    ++  N+K        
Sbjct: 283 FFSKFQIPWIWRWTISIDKDKLGIPLLQRNFFYKWWTKMSSEDIQKIESNVKMVINHDEK 342

Query: 248 TIPKILPAQPVNPFVKIQTDL-KQFSELTETELIVKTMDYMKNQFLQ--SLVQDDTSMKT 78
            IP    +Q   P   ++T   K+F   ++ +++ + +D+MKNQF    S   +D SMKT
Sbjct: 343 QIPDGQSSQQ-TPMEDLKTYFQKKFPNESDQKIMKRVLDHMKNQFFSTFSFPNEDQSMKT 401

Query: 77  ISSNEVSDQDDNEFSILAGESQEPE 3
            SS    D  +N F++LAGESQE E
Sbjct: 402 ASSPGSMD-SNNSFNVLAGESQEEE 425


>XP_009801192.1 PREDICTED: uncharacterized protein LOC104246970 [Nicotiana
           sylvestris]
          Length = 385

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
 Frame = -2

Query: 440 LTLVHFIIRFGIPWIWKWDLQCNC*NK-IPSL*RVFYTKWWDKCLNPTF------AELIK 282
           ++ ++F I F IPWI KWD+Q     + IP L R+ Y K+W K  +P         +LI 
Sbjct: 233 ISAMYFFIEFSIPWIMKWDVQTGYTEEGIPCLQRIVYNKFWTKLAHPDHQGKIYGEDLIN 292

Query: 281 NIKTHTQACLDTIPKILPAQPVNPFVKIQTDLK-QFSELTETELIVKTMDYMKNQFLQSL 105
            IK+  +   D     +    ++PF ++   L+ +   +++ E+I    + +K    ++ 
Sbjct: 293 QIKSKIEEYKDQEVTNIDEGELSPFQQVIRKLQMKKGAISKKEIIASYFEEIKKDLAKNF 352

Query: 104 ---VQDDTSMKTISSNEVSDQDDNEFSILAGESQ 12
              + DD SM +I +        +E    AGE+Q
Sbjct: 353 ETEIGDDISMTSIGNT------SDEEVCAAGEAQ 380


>XP_016432715.1 PREDICTED: uncharacterized protein LOC107759331 [Nicotiana tabacum]
          Length = 890

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
 Frame = -2

Query: 431  VHFIIRFGIPWIWKWDLQCN-C*NKIPSL*RVFYTKWWDKCLNPTFAELIKNIKTHT--- 264
            ++F + F IPWI KW  +      ++P L R+FY  +WDK +        K+ KT T   
Sbjct: 721  IYFFLEFSIPWIHKWTPEVRFTEEQVPCLYRIFYNNFWDKLMK-------KDPKTKTLYG 773

Query: 263  QACLDTIPKILPAQPVNPFVKIQTDLK--------QFSELTETELIVKTMDYMKNQFLQS 108
            Q  LD+I   +      P  ++  D           F E    E+I   ++ +K   L S
Sbjct: 774  QELLDSIKIKIQEYSSKPQKEVINDSSVRHIARRISFQEGDRAEMINNYLEEVKRNLLHS 833

Query: 107  LVQ---DDTSMKTISSNEVSDQDDNEF 36
            + Q    DTSM++ +SN+   +D   F
Sbjct: 834  INQYEKSDTSMQSETSNDDIAEDSQPF 860


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