BLASTX nr result
ID: Panax25_contig00052386
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00052386
(402 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_018503431.1 PREDICTED: uncharacterized protein LOC108867382 [... 114 3e-27
XP_008365143.1 PREDICTED: uncharacterized protein LOC103428807 [... 114 5e-27
XP_013700011.1 PREDICTED: uncharacterized protein LOC106403763 [... 109 8e-27
XP_009338118.1 PREDICTED: uncharacterized protein LOC103930502 [... 112 1e-26
JAU10298.1 Retrovirus-related Pol polyprotein from transposon TN... 105 2e-26
XP_008392328.1 PREDICTED: uncharacterized protein LOC103454522 [... 107 3e-26
XP_017191027.1 PREDICTED: uncharacterized protein LOC108174503 [... 111 4e-26
KYP38574.1 Retrovirus-related Pol polyprotein from transposon TN... 110 5e-26
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TN... 110 1e-25
XP_013722511.1 PREDICTED: uncharacterized protein LOC106426330 [... 105 1e-25
KYP66219.1 Retrovirus-related Pol polyprotein from transposon TN... 110 2e-25
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TN... 110 2e-25
KYP44533.1 Retrovirus-related Pol polyprotein from transposon TN... 110 2e-25
XP_010911411.1 PREDICTED: uncharacterized protein LOC105037447 [... 105 2e-25
KYP32069.1 Retrovirus-related Pol polyprotein from transposon TN... 109 3e-25
XP_008780613.1 PREDICTED: uncharacterized protein LOC103700449, ... 106 5e-25
XP_013688816.1 PREDICTED: uncharacterized protein LOC106392553 [... 106 1e-24
GAU28864.1 hypothetical protein TSUD_293160 [Trifolium subterran... 107 1e-24
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian... 107 1e-24
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana] 107 1e-24
>XP_018503431.1 PREDICTED: uncharacterized protein LOC108867382 [Pyrus x
bretschneideri]
Length = 462
Score = 114 bits (284), Expect = 3e-27
Identities = 60/133 (45%), Positives = 79/133 (59%)
Frame = +1
Query: 4 RGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTVEEQSNFIETEDPNKEAATLLFVQ 183
R G+ H C+ +C +GHYA++C +K+ E N E+ E T+L
Sbjct: 211 RSTRGKAHIQCH-------SCKQYGHYANECSYKNG--EHVNMAESSGNAGEELTVLLAH 261
Query: 184 EEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYHIN 363
++ Q ++WYLDSGASNHM GK+E F ELK +GSVS GDSSKLPV+GKGKIKI +
Sbjct: 262 HDISSQQDVWYLDSGASNHMCGKKEFFAELKDGPYGSVSHGDSSKLPVEGKGKIKIIQKD 321
Query: 364 GIPQYISKCIIYP 402
G +YIS P
Sbjct: 322 GKEEYISDTYYIP 334
>XP_008365143.1 PREDICTED: uncharacterized protein LOC103428807 [Malus domestica]
Length = 506
Score = 114 bits (284), Expect = 5e-27
Identities = 60/133 (45%), Positives = 80/133 (60%)
Frame = +1
Query: 4 RGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTVEEQSNFIETEDPNKEAATLLFVQ 183
R G+ H C+ +C +GHYA++C +K+ E N +E+ E T+L
Sbjct: 265 RSTRGKAHIQCH-------SCKQYGHYANECSYKNG--EHVNMVESSGNAGEEFTVLLAH 315
Query: 184 EEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYHIN 363
+ +Q ++WYLD GASNHM GK+E F ELK +GSVSLGDSSKLPV+GKGKIKI +
Sbjct: 316 HDSSNQQDVWYLDFGASNHMCGKKEFFAELKDGPYGSVSLGDSSKLPVEGKGKIKIIQND 375
Query: 364 GIPQYISKCIIYP 402
G +YIS P
Sbjct: 376 GREEYISDTYYIP 388
>XP_013700011.1 PREDICTED: uncharacterized protein LOC106403763 [Brassica napus]
Length = 250
Score = 109 bits (272), Expect = 8e-27
Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 19 RGHGSCNPK------DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLL 174
RGHG NPK +IK ++C FGHYAS+C + + VEE+SN++E ++ +
Sbjct: 49 RGHGRGNPKSRYDKSNIKCYSCGKFGHYASECKTPNNNRVEEKSNYVEERRKEEDMLLMA 108
Query: 175 FVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIY 354
+ ++E + H WYLDSGASNHM G + +F EL + V +V+LGD SK+ V+GKG I I
Sbjct: 109 YKKDEPNEVHK-WYLDSGASNHMCGNKSMFVELDESVKTNVALGDESKMEVKGKGNILIR 167
Query: 355 HINGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 168 LKNGDHQFISNVYYIP 183
>XP_009338118.1 PREDICTED: uncharacterized protein LOC103930502 [Pyrus x
bretschneideri]
Length = 505
Score = 112 bits (281), Expect = 1e-26
Identities = 59/133 (44%), Positives = 78/133 (58%)
Frame = +1
Query: 4 RGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTVEEQSNFIETEDPNKEAATLLFVQ 183
R G+ H C+ +C +GHYA++C +K+ E N E+ E T+L
Sbjct: 242 RSTRGKAHIQCH-------SCKQYGHYANECSYKNG--EHVNMAESSGNAGEELTVLLAH 292
Query: 184 EEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYHIN 363
++ Q ++WYLD GASNHM GK+E ELK +GSVSLGDSSKLPV+GKGKIKI +
Sbjct: 293 HDISSQQDVWYLDFGASNHMCGKKEFIAELKDGAYGSVSLGDSSKLPVEGKGKIKIIQKD 352
Query: 364 GIPQYISKCIIYP 402
G +YIS P
Sbjct: 353 GKEEYISDTYYIP 365
>JAU10298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 164
Score = 105 bits (263), Expect = 2e-26
Identities = 58/135 (42%), Positives = 80/135 (59%), Gaps = 6/135 (4%)
Frame = +1
Query: 16 GRGHGSCNPK----DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLLF 177
GRG GS + +K +NC FGHYAS+C + + VEE+SN++E + + +
Sbjct: 11 GRGRGSPKSRYDKSSVKCYNCGKFGHYASECRAPNNNRVEEKSNYVEEIRQEGDMLLMAY 70
Query: 178 VQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYH 357
++E D+ WYLDSGASNHM GK +F +L + V G V+LGD SK+ V+GKG I I
Sbjct: 71 KKDEP-DEVQKWYLDSGASNHMCGKRSMFVKLDESVKGDVALGDESKMEVKGKGNILIRL 129
Query: 358 INGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 130 KNGDHQFISNVYYIP 144
>XP_008392328.1 PREDICTED: uncharacterized protein LOC103454522 [Malus domestica]
Length = 215
Score = 107 bits (266), Expect = 3e-26
Identities = 55/116 (47%), Positives = 71/116 (61%)
Frame = +1
Query: 4 RGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTVEEQSNFIETEDPNKEAATLLFVQ 183
R G H C+ C +GHYA++C +K+ E N E+ E T+L
Sbjct: 108 RSTRGNAHIQCH-------TCKQYGHYANECSYKNG--EHVNMAESNGNAGEEFTVLLAH 158
Query: 184 EEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKI 351
++ Q ++WYLDSGASNHM GK+E F ELK +GS+SLGDSSKLPV+GKGKIKI
Sbjct: 159 HDIXSQQDVWYLDSGASNHMCGKKEFFAELKDGPYGSLSLGDSSKLPVEGKGKIKI 214
>XP_017191027.1 PREDICTED: uncharacterized protein LOC108174503 [Malus domestica]
Length = 533
Score = 111 bits (278), Expect = 4e-26
Identities = 59/133 (44%), Positives = 78/133 (58%)
Frame = +1
Query: 4 RGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTVEEQSNFIETEDPNKEAATLLFVQ 183
R G+ H C+ C +GHYA++C +K+ E N E+ E T+L
Sbjct: 265 RSTRGKAHIQCH-------TCKQYGHYANECSYKNG--EHVNMAESNGNAGEEFTVLLAH 315
Query: 184 EEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYHIN 363
++ Q ++WYLD GASNHM GK+E F ELK +GSVSLG+SSKLPV+GKGKIKI +
Sbjct: 316 HDISSQQDVWYLDCGASNHMCGKKEFFAELKDGPYGSVSLGNSSKLPVEGKGKIKIIQKD 375
Query: 364 GIPQYISKCIIYP 402
G +YIS P
Sbjct: 376 GKEKYISDTYYIP 388
>KYP38574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 429
Score = 110 bits (275), Expect = 5e-26
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 16 GRGHGSCNPK----DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLLF 177
GRG G+ N + IK +NCN FGHYAS+C +K+ VEE++N+ E E ++ LL
Sbjct: 208 GRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAE-ERCQEDGTLLLA 266
Query: 178 VQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYH 357
+ + + N WYLDSGASNHM GK +F EL + V G+V+ GD SK+ V+GKG + I
Sbjct: 267 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 326
Query: 358 INGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 327 KNGEHQFISNVYYVP 341
>KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1331
Score = 110 bits (276), Expect = 1e-25
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 16 GRGHGSCNPK----DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLLF 177
GRG G+ N + IK +NCN FGHYAS+C +K+ VEE++N+ E E ++ LL
Sbjct: 252 GRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAE-ERCQEDGTLLLA 310
Query: 178 VQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYH 357
+ + + N WYLDSGASNHM GK +F EL + V G+V+ GD SK+ V+GKG + I
Sbjct: 311 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIQL 370
Query: 358 INGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 371 KNGEHQFISNIYYVP 385
>XP_013722511.1 PREDICTED: uncharacterized protein LOC106426330 [Brassica napus]
Length = 224
Score = 105 bits (262), Expect = 1e-25
Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Frame = +1
Query: 19 RGHGSCNPKD------IKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLL 174
RG G NPK IK ++C FGHYAS+C + + VEE+SN++E ++ +
Sbjct: 49 RGRGRGNPKSRYDKSSIKCYSCGKFGHYASECKTPNNNRVEEKSNYVEERRKQEDMLLMA 108
Query: 175 FVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIY 354
+ ++E + H WYLDSGASNHM G + +F EL + V V+LGD SK+ V+GKG I I
Sbjct: 109 YKKDEPNEVHK-WYLDSGASNHMCGNKNMFVELDESVKTDVALGDESKMEVKGKGNILIR 167
Query: 355 HINGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 168 LKNGDHQFISNVYYIP 183
>KYP66219.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1033
Score = 110 bits (275), Expect = 2e-25
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 16 GRGHGSCNPK----DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLLF 177
GRG G+ N + IK +NCN FGHYAS+C +K+ VEE++N+ E E ++ LL
Sbjct: 197 GRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAE-ERCQEDGTLLLA 255
Query: 178 VQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYH 357
+ + + N WYLDSGASNHM GK +F EL + V G+V+ GD SK+ V+GKG + I
Sbjct: 256 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 315
Query: 358 INGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 316 KNGEHQFISNVYYVP 330
>KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 110 bits (275), Expect = 2e-25
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 16 GRGHGSCNPK----DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLLF 177
GRG G+ N + IK +NCN FGHYAS+C +K+ VEE++N+ E E ++ LL
Sbjct: 263 GRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAE-ERCQEDGTLLLA 321
Query: 178 VQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYH 357
+ + + N WYLDSGASNHM GK +F EL + V G+V+ GD SK+ V+GKG + I
Sbjct: 322 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 381
Query: 358 INGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 382 KNGEHQFISNVYYVP 396
>KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 110 bits (275), Expect = 2e-25
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 16 GRGHGSCNPK----DIKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLLF 177
GRG G+ N + IK +NCN FGHYAS+C +K+ VEE++N+ E E ++ LL
Sbjct: 263 GRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAE-ERCQEDGTLLLA 321
Query: 178 VQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYH 357
+ + + N WYLDSGASNHM GK +F EL + V G+V+ GD SK+ V+GKG + I
Sbjct: 322 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 381
Query: 358 INGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 382 KNGEHQFISNVYYVP 396
>XP_010911411.1 PREDICTED: uncharacterized protein LOC105037447 [Elaeis guineensis]
Length = 252
Score = 105 bits (262), Expect = 2e-25
Identities = 53/133 (39%), Positives = 79/133 (59%)
Frame = +1
Query: 4 RGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTVEEQSNFIETEDPNKEAATLLFVQ 183
RGR G +++ +NC+ +GHY+ +CW+ EQSN+ E+++ E LL Q
Sbjct: 95 RGRRLNGGRDQARSNVQCYNCHKYGHYSYECWNN----EQSNYSESKNQEGEPTLLLACQ 150
Query: 184 EEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIYHIN 363
+ D N+W+LDS A+NHM G+++LF E ++ VHG V GD SK+PV+G+ KI I N
Sbjct: 151 QNG-DLKNVWFLDSAATNHMCGRKDLFVEFQEGVHGDVKFGDFSKVPVKGRDKIMIQQKN 209
Query: 364 GIPQYISKCIIYP 402
G +IS P
Sbjct: 210 GTSDFISNVYYVP 222
>KYP32069.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 954
Score = 109 bits (273), Expect = 3e-25
Identities = 61/138 (44%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Frame = +1
Query: 13 FGRGHGSCNPKD------IKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAAT 168
+ RG G NP IK +NCN FGHYAS C +K+ VEE++N+ E E ++
Sbjct: 195 YNRGRGRGNPNSRYGKSRIKCYNCNKFGHYASKCRAPNKNKVEEKANYAE-ERCQEDGTL 253
Query: 169 LLFVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIK 348
LL + + + N WYLDSGASNHM GK +F EL + V G+V+ GD SK+ V+GKG +
Sbjct: 254 LLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVL 313
Query: 349 IYHINGIPQYISKCIIYP 402
I NG Q+IS P
Sbjct: 314 IRLKNGEHQFISNVYYVP 331
>XP_008780613.1 PREDICTED: uncharacterized protein LOC103700449, partial [Phoenix
dactylifera]
Length = 326
Score = 106 bits (264), Expect = 5e-25
Identities = 52/125 (41%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Frame = +1
Query: 1 GRGRFGRGHGSCNPKDIKYFNCNNFGHYASDCWHKSTV-EEQSNFIETEDPNKEAATLLF 177
GRGR G+ + +I+ + C FGHYAS+CW+ + EE+ NF++ E+ K+ LL
Sbjct: 201 GRGRGGQSKWRYDKSEIQCYCCKKFGHYASECWYNTNNNEEKVNFVDKEEEEKQEPVLLL 260
Query: 178 VQEEV--CDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKI 351
+++ C+ + WYLD+GASNHM G++E F EL++ +G+++ GD S+ PV+GKGKI +
Sbjct: 261 AYDKLEGCNS-STWYLDTGASNHMCGEKEFFIELEEKQYGNITFGDLSQRPVKGKGKILL 319
Query: 352 YHING 366
NG
Sbjct: 320 ELKNG 324
>XP_013688816.1 PREDICTED: uncharacterized protein LOC106392553 [Brassica napus]
Length = 385
Score = 106 bits (264), Expect = 1e-24
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 8/130 (6%)
Frame = +1
Query: 19 RGHGSCNPKD------IKYFNCNNFGHYASDCW--HKSTVEEQSNFIETEDPNKEAATLL 174
RG G NPK IK ++C FGHYAS+C + + VEE+SN++E K+ +
Sbjct: 152 RGRGRGNPKSKYDKSSIKCYSCGKFGHYASECKTPNNNRVEEKSNYVEEMSKEKDMLLMA 211
Query: 175 FVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIY 354
+ ++E + H WYLDSGASNHM G + +F EL + V +V+LGD SK+ V+GKG I I
Sbjct: 212 YKKDEPNEVHK-WYLDSGASNHMCGNKSMFVELDESVKTNVALGDESKMEVKGKGNILIR 270
Query: 355 HINGIPQYIS 384
NG Q+IS
Sbjct: 271 LKNGDHQFIS 280
>GAU28864.1 hypothetical protein TSUD_293160 [Trifolium subterraneum]
Length = 951
Score = 107 bits (268), Expect = 1e-24
Identities = 59/136 (43%), Positives = 81/136 (59%), Gaps = 8/136 (5%)
Frame = +1
Query: 19 RGHGSCNPKD------IKYFNCNNFGHYASDCWHKST--VEEQSNFIETEDPNKEAATLL 174
RGHG +PK +K +NC FGHYAS+C S VEE++N++E E ++ LL
Sbjct: 263 RGHGRGSPKPRYDKSRVKCYNCEKFGHYASECRAPSNRKVEEKANYVE-EISQEDGTLLL 321
Query: 175 FVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIY 354
++ N WYLDSGASNHM G+ +F EL + V+G+V+ GD SK+ V+GKG + I
Sbjct: 322 AHKDNERGGDNQWYLDSGASNHMCGRRSMFVELDESVNGNVAFGDESKVAVKGKGNVLIR 381
Query: 355 HINGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 382 LKNGDHQFISNVYYVP 397
>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 107 bits (268), Expect = 1e-24
Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 19 RGHGSCNPKD------IKYFNCNNFGHYASDCWHKST--VEEQSNFIETEDPNKEAATLL 174
RG G +PK +K +NC FGHYAS+C S EE++N++E + ++ +
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMA 322
Query: 175 FVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIY 354
+++ ++++ WYLDSGASNHM G++ +F EL + V G+V+LGD SK+ V+GKG I I
Sbjct: 323 SYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIR 382
Query: 355 HINGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 383 LKNGDHQFISNVYYIP 398
>AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 107 bits (268), Expect = 1e-24
Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 19 RGHGSCNPKD------IKYFNCNNFGHYASDCWHKST--VEEQSNFIETEDPNKEAATLL 174
RG G +PK +K +NC FGHYAS+C S EE++N++E + ++ +
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMA 322
Query: 175 FVQEEVCDQHNMWYLDSGASNHMSGKEELFEELKKDVHGSVSLGDSSKLPVQGKGKIKIY 354
+++ ++++ WYLDSGASNHM G++ +F EL + V G+V+LGD SK+ V+GKG I I
Sbjct: 323 SYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIR 382
Query: 355 HINGIPQYISKCIIYP 402
NG Q+IS P
Sbjct: 383 LKNGDHQFISNVYYIP 398