BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00052280
         (413 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CBI32830.3 unnamed protein product, partial [Vitis vinifera]           54   6e-06
XP_019077463.1 PREDICTED: mediator of RNA polymerase II transcri...    54   7e-06
XP_010653646.1 PREDICTED: mediator of RNA polymerase II transcri...    54   7e-06

>CBI32830.3 unnamed protein product, partial [Vitis vinifera]
          Length = 407

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 14/83 (16%)
 Frame = +1

Query: 196 NIATTYQQPLTEQSSDCGL-QQQRMVGS---------HQHSLHIVQQPVDTLPRQNL--- 336
           N++ ++QQPL  QS+  G+ QQQ++VG          HQHS++I+QQ      ++N+   
Sbjct: 263 NMSNSFQQPLNPQSNVSGVQQQQKIVGPQSDVLNMQVHQHSVNILQQAETNTAQKNVPWT 322

Query: 337 -EPEQLHQVLGSRYPNNSLEEAS 402
            +  QLH++LGS+  NNSL E+S
Sbjct: 323 SQTLQLHKLLGSQQKNNSLPESS 345


>XP_019077463.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X2 [Vitis vinifera]
          Length = 945

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 14/83 (16%)
 Frame = +1

Query: 196 NIATTYQQPLTEQSSDCGL-QQQRMVGS---------HQHSLHIVQQPVDTLPRQNL--- 336
           N++ ++QQPL  QS+  G+ QQQ++VG          HQHS++I+QQ      ++N+   
Sbjct: 114 NMSNSFQQPLNPQSNVSGVQQQQKIVGPQSDVLNMQVHQHSVNILQQAETNTAQKNVPWT 173

Query: 337 -EPEQLHQVLGSRYPNNSLEEAS 402
            +  QLH++LGS+  NNSL E+S
Sbjct: 174 SQTLQLHKLLGSQQKNNSLPESS 196


>XP_010653646.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X1 [Vitis vinifera]
          Length = 1095

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 14/83 (16%)
 Frame = +1

Query: 196 NIATTYQQPLTEQSSDCGL-QQQRMVGS---------HQHSLHIVQQPVDTLPRQNL--- 336
           N++ ++QQPL  QS+  G+ QQQ++VG          HQHS++I+QQ      ++N+   
Sbjct: 264 NMSNSFQQPLNPQSNVSGVQQQQKIVGPQSDVLNMQVHQHSVNILQQAETNTAQKNVPWT 323

Query: 337 -EPEQLHQVLGSRYPNNSLEEAS 402
            +  QLH++LGS+  NNSL E+S
Sbjct: 324 SQTLQLHKLLGSQQKNNSLPESS 346