BLASTX nr result
ID: Panax25_contig00051446
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00051446
(431 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017255899.1 PREDICTED: probable RNA helicase SDE3 [Daucus car... 44 2e-07
KZN09719.1 hypothetical protein DCAR_002375 [Daucus carota subsp... 44 2e-07
XP_016575346.1 PREDICTED: probable RNA helicase SDE3 [Capsicum a... 42 6e-07
XP_009618198.1 PREDICTED: probable RNA helicase SDE3 isoform X1 ... 41 8e-07
XP_009618202.1 PREDICTED: probable RNA helicase SDE3 isoform X2 ... 41 8e-07
XP_016464116.1 PREDICTED: probable RNA helicase SDE3 [Nicotiana ... 41 1e-06
XP_019266435.1 PREDICTED: probable RNA helicase SDE3 [Nicotiana ... 41 1e-06
XP_009791431.1 PREDICTED: probable RNA helicase SDE3 [Nicotiana ... 41 1e-06
XP_009393039.1 PREDICTED: probable RNA helicase SDE3 isoform X1 ... 35 3e-06
XP_009393045.1 PREDICTED: probable RNA helicase SDE3 isoform X2 ... 35 4e-06
XP_015888159.1 PREDICTED: probable RNA helicase SDE3 [Ziziphus j... 37 5e-06
XP_006350649.1 PREDICTED: probable RNA helicase SDE3 [Solanum tu... 42 5e-06
CDO99085.1 unnamed protein product [Coffea canephora] 39 7e-06
>XP_017255899.1 PREDICTED: probable RNA helicase SDE3 [Daucus carota subsp.
sativus]
Length = 1042
Score = 43.9 bits (102), Expect(2) = 2e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKKPWSNLVSPHDFVSGLRPPRASTQGF 213
D++ SLA +K +RE +KK W NL++ +D + G RPP+AS Q F
Sbjct: 168 DKVAESLAGNKKFRREIKKKQWPNLIT-NDVIPGSRPPKASIQYF 211
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKE+GLHT+AVH T +++T +++L
Sbjct: 137 CKPKELGLHTAAVHITTEEDTIERLVFVL 165
>KZN09719.1 hypothetical protein DCAR_002375 [Daucus carota subsp. sativus]
Length = 707
Score = 43.9 bits (102), Expect(2) = 2e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKKPWSNLVSPHDFVSGLRPPRASTQGF 213
D++ SLA +K +RE +KK W NL++ +D + G RPP+AS Q F
Sbjct: 168 DKVAESLAGNKKFRREIKKKQWPNLIT-NDVIPGSRPPKASIQYF 211
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKE+GLHT+AVH T +++T +++L
Sbjct: 137 CKPKELGLHTAAVHITTEEDTIERLVFVL 165
>XP_016575346.1 PREDICTED: probable RNA helicase SDE3 [Capsicum annuum]
XP_016575347.1 PREDICTED: probable RNA helicase SDE3
[Capsicum annuum] XP_016575348.1 PREDICTED: probable RNA
helicase SDE3 [Capsicum annuum] XP_016575349.1
PREDICTED: probable RNA helicase SDE3 [Capsicum annuum]
XP_016575351.1 PREDICTED: probable RNA helicase SDE3
[Capsicum annuum]
Length = 973
Score = 42.4 bits (98), Expect(2) = 6e-07
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 14 VVCRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
+ C+PKEIGLHTSAVHF + D+T +++L
Sbjct: 137 LTCKPKEIGLHTSAVHFNVGDDTIERLVFVL 167
Score = 38.1 bits (87), Expect(2) = 6e-07
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ + + FV G RP RAS +GF + R+ Y +
Sbjct: 170 DKVSRSLASSRPFHRDRKKKVPAVDVSAANGFVMGSRPTRASNRGFRN----RLPSYEIP 225
Query: 256 KDRSQRLLKKDIMRVRG 306
+D + + +K V G
Sbjct: 226 EDLKEMIEQKQFPDVIG 242
>XP_009618198.1 PREDICTED: probable RNA helicase SDE3 isoform X1 [Nicotiana
tomentosiformis] XP_009618199.1 PREDICTED: probable RNA
helicase SDE3 isoform X1 [Nicotiana tomentosiformis]
XP_009618200.1 PREDICTED: probable RNA helicase SDE3
isoform X1 [Nicotiana tomentosiformis] XP_009618201.1
PREDICTED: probable RNA helicase SDE3 isoform X1
[Nicotiana tomentosiformis]
Length = 992
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKEIGLHTSAVH + DET +++L
Sbjct: 139 CKPKEIGLHTSAVHINVGDETIERLVFVL 167
Score = 39.3 bits (90), Expect(2) = 8e-07
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ +P+ FV G RP RA QGF + R+ Y +
Sbjct: 170 DKVSQSLASSRPYYRDRKKKAPAIDVFAPNAFVVGSRPTRARNQGFRY----RLSSYPIP 225
Query: 256 KDRSQRLLKK 285
D + + KK
Sbjct: 226 GDIREMIEKK 235
>XP_009618202.1 PREDICTED: probable RNA helicase SDE3 isoform X2 [Nicotiana
tomentosiformis]
Length = 982
Score = 40.8 bits (94), Expect(2) = 8e-07
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKEIGLHTSAVH + DET +++L
Sbjct: 139 CKPKEIGLHTSAVHINVGDETIERLVFVL 167
Score = 39.3 bits (90), Expect(2) = 8e-07
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ +P+ FV G RP RA QGF + R+ Y +
Sbjct: 170 DKVSQSLASSRPYYRDRKKKAPAIDVFAPNAFVVGSRPTRARNQGFRY----RLSSYPIP 225
Query: 256 KDRSQRLLKK 285
D + + KK
Sbjct: 226 GDIREMIEKK 235
>XP_016464116.1 PREDICTED: probable RNA helicase SDE3 [Nicotiana tabacum]
XP_016464117.1 PREDICTED: probable RNA helicase SDE3
[Nicotiana tabacum] XP_016464118.1 PREDICTED: probable
RNA helicase SDE3 [Nicotiana tabacum]
Length = 982
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKEIGLHTSAVH + DET +++L
Sbjct: 139 CKPKEIGLHTSAVHINVGDETIERLVFVL 167
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ +P+ FV G RP RA QGF + R+ Y +
Sbjct: 170 DKVSQSLASSRPYYRDRKKKAPAIDVFAPNAFVVGSRPTRARNQGFRY----RLSSYPIP 225
Query: 256 KDRSQRLLKK 285
D + + KK
Sbjct: 226 GDIREIIEKK 235
>XP_019266435.1 PREDICTED: probable RNA helicase SDE3 [Nicotiana attenuata]
XP_019266437.1 PREDICTED: probable RNA helicase SDE3
[Nicotiana attenuata] OIT35046.1 putative rna helicase
sde3 [Nicotiana attenuata]
Length = 970
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKEIGLHTSAVH + DET +++L
Sbjct: 139 CKPKEIGLHTSAVHINVGDETIERLVFVL 167
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ +P+ FV G RP RA QGF + R+ Y +
Sbjct: 170 DKVSQSLASSRPYYRDRKKKAPAVDVFAPNAFVVGSRPTRARNQGFRY----RLPSYPIP 225
Query: 256 KDRSQRLLKKDIMRVRG 306
D + + K+ V G
Sbjct: 226 GDIREMIEKEQFPDVIG 242
>XP_009791431.1 PREDICTED: probable RNA helicase SDE3 [Nicotiana sylvestris]
XP_016503012.1 PREDICTED: probable RNA helicase SDE3
isoform X1 [Nicotiana tabacum] XP_016503013.1 PREDICTED:
probable RNA helicase SDE3 isoform X2 [Nicotiana
tabacum]
Length = 952
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKEIGLHTSAVH + DET +++L
Sbjct: 139 CKPKEIGLHTSAVHINVGDETVERLVFVL 167
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ +P+ FV G RP RA QGF + R+ Y +
Sbjct: 170 DKVSQSLASSRPYYRDRKKKAPAVDVFAPNAFVVGSRPTRARNQGFRY----RLPSYRIP 225
Query: 256 KDRSQRLLKKDIMRVRG 306
D + + K+ V G
Sbjct: 226 GDIREMIEKEQFPDVIG 242
>XP_009393039.1 PREDICTED: probable RNA helicase SDE3 isoform X1 [Musa acuminata
subsp. malaccensis] XP_009393040.1 PREDICTED: probable
RNA helicase SDE3 isoform X1 [Musa acuminata subsp.
malaccensis] XP_009393041.1 PREDICTED: probable RNA
helicase SDE3 isoform X1 [Musa acuminata subsp.
malaccensis] XP_009393042.1 PREDICTED: probable RNA
helicase SDE3 isoform X1 [Musa acuminata subsp.
malaccensis] XP_009393043.1 PREDICTED: probable RNA
helicase SDE3 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 956
Score = 35.0 bits (79), Expect(3) = 3e-06
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKKPWSNLVSPHDFVSGLRPPRASTQGFLHIR 225
D+++ +L SDK + R+K + N +V+G RPPRA TQG R
Sbjct: 169 DKVSQALFSDKPYRASSRRKMFDN----DRYVAGSRPPRAHTQGIRRYR 213
Score = 33.9 bits (76), Expect(3) = 3e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+P +IGLHTS +HF ++ E ++LL
Sbjct: 138 CKPTDIGLHTSVLHFDLEYEKVERVVFLL 166
Score = 28.1 bits (61), Expect(3) = 3e-06
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 207 RLPAYSIPEGVRVLIGKRQIPEAI 278
RLP + IP+ +R +I +Q+P+ I
Sbjct: 213 RLPPFDIPQDLREIIENKQVPDVI 236
>XP_009393045.1 PREDICTED: probable RNA helicase SDE3 isoform X2 [Musa acuminata
subsp. malaccensis]
Length = 806
Score = 35.0 bits (79), Expect(3) = 4e-06
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKKPWSNLVSPHDFVSGLRPPRASTQGFLHIR 225
D+++ +L SDK + R+K + N +V+G RPPRA TQG R
Sbjct: 169 DKVSQALFSDKPYRASSRRKMFDN----DRYVAGSRPPRAHTQGIRRYR 213
Score = 33.9 bits (76), Expect(3) = 4e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+P +IGLHTS +HF ++ E ++LL
Sbjct: 138 CKPTDIGLHTSVLHFDLEYEKVERVVFLL 166
Score = 28.1 bits (61), Expect(3) = 4e-06
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 207 RLPAYSIPEGVRVLIGKRQIPEAI 278
RLP + IP+ +R +I +Q+P+ I
Sbjct: 213 RLPPFDIPQDLREIIENKQVPDVI 236
>XP_015888159.1 PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba]
XP_015888160.1 PREDICTED: probable RNA helicase SDE3
[Ziziphus jujuba] XP_015888161.1 PREDICTED: probable RNA
helicase SDE3 [Ziziphus jujuba] XP_015888162.1
PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba]
XP_015868116.1 PREDICTED: probable RNA helicase SDE3
[Ziziphus jujuba] XP_015868117.1 PREDICTED: probable RNA
helicase SDE3 [Ziziphus jujuba] XP_015868118.1
PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba]
XP_015868119.1 PREDICTED: probable RNA helicase SDE3
[Ziziphus jujuba]
Length = 893
Score = 37.0 bits (84), Expect(3) = 5e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PKEIG+HTS VHF ++ + ++LL
Sbjct: 139 CKPKEIGMHTSIVHFDLETDKIERVVFLL 167
Score = 32.7 bits (73), Expect(3) = 5e-06
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 192 QSFNTRLPAYSIPEGVRVLIGKRQIPEAIK 281
+SF RLP Y IP +R L+ +Q+P+ ++
Sbjct: 208 RSFKKRLPRYDIPNDIRELLESKQMPDVVQ 237
Score = 26.9 bits (58), Expect(3) = 5e-06
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKKPWSNLVSPHDFVSGLRPPRASTQGF 213
D+++HSLAS + K+KK L + FV+G RP + F
Sbjct: 170 DKISHSLASKAPYTKSKKKK----LFTVDAFVTGSRPTGPKDRSF 210
>XP_006350649.1 PREDICTED: probable RNA helicase SDE3 [Solanum tuberosum]
Length = 956
Score = 42.4 bits (98), Expect(2) = 5e-06
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 14 VVCRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
+ C+PKEIGLHTSAVHF + D+T +++L
Sbjct: 137 LTCKPKEIGLHTSAVHFNVGDDTIERLVFVL 167
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGFLHIRFRRVLGY*LE 255
D+++ SLAS + R+++KK P ++ + + FV G RP RA +GF + R+ Y +
Sbjct: 170 DKVSQSLASRRPFHRDRKKKVPAVDVYAANAFVVGSRPTRAPNRGFRY----RLPSYPIP 225
Query: 256 KDRSQRLLKKDIMRVRG 306
D + + KK V G
Sbjct: 226 GDIREMIEKKQFPDVIG 242
>CDO99085.1 unnamed protein product [Coffea canephora]
Length = 919
Score = 38.9 bits (89), Expect(3) = 7e-06
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 20 CRPKEIGLHTSAVHFTMDDETNSHTLWLL 106
C+PK IGLHTSAVHF++ D+T ++++
Sbjct: 139 CKPKGIGLHTSAVHFSVGDDTIERLVFVM 167
Score = 29.3 bits (64), Expect(3) = 7e-06
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 189 SQSFNTRLPAYSIPEGVRVLIGKRQIPEAI 278
++ F RL AY +P+ +R I ++QIP+A+
Sbjct: 212 NRGFRYRLHAYPVPQHIRNSIEQQQIPDAL 241
Score = 27.7 bits (60), Expect(3) = 7e-06
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 79 DQLTHSLASDKMGKREKRKK-PWSNLVSPHDFVSGLRPPRASTQGF 213
D+++ LAS++ R ++KK + + S F+ G RP R+ +GF
Sbjct: 170 DKVSQFLASNRPFNRIRKKKHSVTKVFSAEPFIGGSRPIRSPNRGF 215