BLASTX nr result

ID: Panax25_contig00051366 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00051366
         (428 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO65622.1 hypothetical protein CISIN_1g037236mg, partial [Citru...    60   1e-07
XP_015388071.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   1e-07
XP_006440836.1 hypothetical protein CICLE_v10018700mg [Citrus cl...    60   1e-07
XP_008356686.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-06
XP_008374684.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-06
XP_009346404.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   5e-06

>KDO65622.1 hypothetical protein CISIN_1g037236mg, partial [Citrus sinensis]
          Length = 953

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +1

Query: 166 FIKGHRSISSHHICVNVCYGMDK*IVSSWSTFVVACAQHGDRLNAIDLYLQITYSDLDAD 345
           F+  +    S     NV +GMD   VSSW+  +   AQ+GD L A+D +LQ+T+SDL+ D
Sbjct: 412 FVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPD 471

Query: 346 RFAFGRLAI 372
            F+ G L +
Sbjct: 472 LFSIGSLIL 480


>XP_015388071.1 PREDICTED: pentatricopeptide repeat-containing protein At1g18485
           [Citrus sinensis]
          Length = 980

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +1

Query: 166 FIKGHRSISSHHICVNVCYGMDK*IVSSWSTFVVACAQHGDRLNAIDLYLQITYSDLDAD 345
           F+  +    S     NV +GMD   VSSW+  +   AQ+GD L A+D +LQ+T+SDL+ D
Sbjct: 447 FVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPD 506

Query: 346 RFAFGRLAI 372
            F+ G L +
Sbjct: 507 LFSIGSLIL 515


>XP_006440836.1 hypothetical protein CICLE_v10018700mg [Citrus clementina]
           ESR54076.1 hypothetical protein CICLE_v10018700mg
           [Citrus clementina]
          Length = 980

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +1

Query: 166 FIKGHRSISSHHICVNVCYGMDK*IVSSWSTFVVACAQHGDRLNAIDLYLQITYSDLDAD 345
           F+  +    S     NV +GMD   VSSW+  +   AQ+GD L A+D +LQ+T+SDL+ D
Sbjct: 447 FVVAYAKCGSEISAENVFHGMDSRTVSSWNALICGYAQNGDHLKALDYFLQMTHSDLEPD 506

Query: 346 RFAFGRLAI 372
            F+ G L +
Sbjct: 507 LFSIGSLIL 515


>XP_008356686.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Malus domestica]
          Length = 811

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 121 WNFR-WYVLACA*NGRFIKGHRSISSHHICVNVCYGMDK*IVSSWSTFVVACAQHGDRLN 297
           ++FR W++        F+  +    S +    V +G++   V SW+  +  CAQ+GD   
Sbjct: 332 YSFRHWFIYDELVANAFVAAYTKCGSLNSAELVFHGIETKTVGSWNAVIGGCAQNGDPYK 391

Query: 298 AIDLYLQITYSDLDADRFAFGRLAI 372
           A+DLYLQ+ YS LD D F+ G L +
Sbjct: 392 ALDLYLQMKYSGLDPDEFSIGSLLL 416


>XP_008374684.1 PREDICTED: pentatricopeptide repeat-containing protein At1g18485
           [Malus domestica]
          Length = 976

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 121 WNFR-WYVLACA*NGRFIKGHRSISSHHICVNVCYGMDK*IVSSWSTFVVACAQHGDRLN 297
           ++FR W++        F+  +    S +    V +G++   V SW+  +  CAQ+GD   
Sbjct: 426 YSFRHWFIYDELVANAFVAAYTKCGSLNSAELVFHGIETKTVGSWNAVIGGCAQNGDPYK 485

Query: 298 AIDLYLQITYSDLDADRFAFGRLAI 372
           A+DLYLQ+ YS LD D F+ G L +
Sbjct: 486 ALDLYLQMKYSGLDPDEFSIGSLLL 510


>XP_009346404.1 PREDICTED: pentatricopeptide repeat-containing protein At1g18485
           [Pyrus x bretschneideri]
          Length = 974

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = +1

Query: 166 FIKGHRSISSHHICVNVCYGMDK*IVSSWSTFVVACAQHGDRLNAIDLYLQITYSDLDAD 345
           F+  +    S +    V +G++   V SW+  +  CAQ+GD   A+DLYLQ+ YS LD D
Sbjct: 440 FVAAYTKCGSLNSAELVFHGIETKTVGSWNAVIGGCAQNGDPYKALDLYLQMKYSGLDPD 499

Query: 346 RFAFGRLAI 372
            F+ G L +
Sbjct: 500 EFSIGSLLL 508


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